Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00259 CAGAGTTCGCCGGAGGCTGAGTTTTTCTCCGAATTTAGTGATGCTAACAGATACAAAATTCAGGAAGTTATCGGAAAAGGAAGTTATGGGGTTGTTTGTTCAGCTATCGACACCTATAGTGGTGAAAAGGTTGCTATAAAGAAGATCCATGATATTTTTGAACATATATCGGATGCTGCTCGTATTCTTCGCGAGGTGAAGTTGCTCAGACTTCTTCGTCATCCTGATATTGTTGAAATCAAACATATTATGTTACCATCTTCGAGAAGGGACTTCAAAGATATTTATGTTGTTTTTGAGCTGATGGAGTCAGATCTTCATCAAGTTATAAAAGCCAATGATGATCTAACACGAGAGCACCATCAGTTTTTTCTTTACCAACTACTCCGAGCATTGAAGTATATTCATACAGCAAATGTTTACCATCGAGATCTTAAACCTAAGAATATATTGGCTAATGCAAATTGTAAACTTAAGATCTGTGATTTTGGATTGGCTAGAGTTGCAGACTATGTTGCTACTAGATGGTATCGAGCTCCAGAGCTATGTGGTTCATTTTTCTCCAAGTATACACCTGCAATTGATATCTGGAGTATAGGCTGCATATTTGCTGAAGTATTATTGGGGAAGCCACTTTTTCCTGGTAAAAATGTGGTTCACCAGCTTGACTTGATGACTGATCTACTTGGAACTCCTTCATTAGATACAATCTTAAGGGTGAGGAATGATAAGGCTAGGAGATACTTAACCAGTATGAGAAAAAAGGAGCCTGTGCCATTTGCTCAAAAGTTTCCAAATGCTGATCCTCTAGCTCTGGGACTACTCCAAAGATTGCTTGCTTTTGATCCAAAGGATCGGCCAACTGCTGAAGTGGCACTAGCTGATCCATACTTCAAGCGATTGGCCAAAATAGAAAGGGAACCTTCCTGCCAACCAATTACAAAGATGGAATTTGAATTTGAGAGACGAAGGGTCACAAAAGAGGATATCAGAGAACTCATATACCGCGAGATACTAGAGTACCATCCACAACTACTGAAAAACTATACAACTGGAACTGGGAGAACAAACTTTCTTTATCCAAGTGCCGTAGATCAATTTAGAAAGCAGTTCGCAGATCTTGAAGAAAATGGTGGTAGAAGTGCGCCCGTGATTCCTCTTGAAAGAAAACACACATCATTACCTAGGTCTTCTACTTTAGAAGCACATATTCCTATGAAAGAGCAGTCCAAAAATGTCTCCCTTAAGGACATGAAGGCTCAAGAAGAGGCACGCAGTGGATTCATTCAGCCTCAAGCTCCACCTTCTGGTTATTACTCATCTTTGCAAGCCAAACAACTTCCTCAGAGTAATATGGTGCCAAAATTAGCACCTGATGTAGCAATCAACATCGACTCCAATCCCTTTTTCATGACACGAGCTGGAGTGATCAAGAGGGACCACCATGATTCAATTGCTATTGATCCCAACTTTTTGCACGCAACTGCTGCTGCAACTGCTCAAAGAAAGGTCGGGACTGTCCAGATTGGTCTGACAGGGATGTATTAG 1548 40.76 QSSPEAEFFSEFSDANRYKIQEVIGKGSYGVVCSAIDTYSGEKVAIKKIHDIFEHISDAARILREVKLLRLLRHPDIVEIKHIMLPSSRRDFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVADYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLLGKPLFPGKNVVHQLDLMTDLLGTPSLDTILRVRNDKARRYLTSMRKKEPVPFAQKFPNADPLALGLLQRLLAFDPKDRPTAEVALADPYFKRLAKIEREPSCQPITKMEFEFERRRVTKEDIRELIYREILEYHPQLLKNYTTGTGRTNFLYPSAVDQFRKQFADLEENGGRSAPVIPLERKHTSLPRSSTLEAHIPMKEQSKNVSLKDMKAQEEARSGFIQPQAPPSGYYSSLQAKQLPQSNMVPKLAPDVAINIDSNPFFMTRAGVIKRDHHDSIAIDPNFLHATAAATAQRKVGTVQIGLTGMY 515
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4471145 4474154 + Bda023486.1 Bda06g00259 7841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00259 515 ProSitePatterns Protein kinases ATP-binding region signature. 24 48 IPR017441 GO:0005524
Bda06g00259 515 ProSiteProfiles Protein kinase domain profile. 18 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g00259 515 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 5 434 - -
Bda06g00259 515 SMART serkin_6 18 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g00259 515 Gene3D Transferase(Phosphotransferase) domain 1 104 321 - -
Bda06g00259 515 CDD STKc_TDY_MAPK 17 343 - -
Bda06g00259 515 SUPERFAMILY Protein kinase-like (PK-like) 13 302 IPR011009 -
Bda06g00259 515 Pfam Protein kinase domain 18 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g00259 515 Gene3D Phosphorylase Kinase; domain 1 33 344 - -
Bda06g00259 515 ProSitePatterns MAP kinase signature. 53 156 IPR003527 GO:0004707|GO:0005524|GO:0006468
Bda06g00259 515 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 5 434 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00259 Bda-Chr6:4471145 Bda14g01424 Bda-Chr14:18016718 0 dispersed
Bda06g00259 Bda-Chr6:4471145 Bda01g01510 Bda-Chr1:50947019 6.00E-108 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69660 PF00069 Pkinase 9.10E-62 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00259 - - jre:108993499 788.489