Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00303 ATGGGTTGTGTATATGCTAAGCCTTTGGCTGTTGAAGACAGCCAGAAAGACAGATTGAAAGAACATAAAGTTCCGGGCTCGAATTCATCAAGAGCAGAAGAGATTATTCGATTGAAATCGATTGGGCAGGGAACTTATAGCAGTGTTTACAAGGCTCGTGATCTAATTCACGATAAATTAGTAGCTTTAAAGAGAGTGAAATTTGATAATCTCGACATCGAAAGTGTCGAGTTTATGGCAAGGGAAATCCTTATTTTGCGCCGGCTCAACCATCCAAATATCATAAAACTAGAAGGCTTAATTACAACCCCAAGGTCTTGCAGCTTGTACCTTGTTTTCGAGTACATGGAACACGACCTTCTGGGATTGGCATCACGTCCAGGAGTCGAATTCACAGAACCGCAGATTAAATGCTATATGCAACAACTTCTACGGGGGCTCGATTACTGTCACAATCATGGGGTCTTGCATCGTGACATTAAGGGCTCAAATCTTCTTATCGATGACAAGGGGCTTTTGAAGATTGCAGATTTTGGTCTAGCGAGTTTTTACGACCCTGATAATGGTGTTCCTTTGACGACTCGGGTAGTGACACTATGGTATAGACCACCTGAACTCTTACTTGGAGTTTCCCATTATGGAGTTGCAGTCGATATGTGGAGCGTTGGTTGTATTCTCGCAGAGCTTTACACTGGAAAGCCATTGTTACCAGGAAAAACTGAGGTTGAACAACTGCATAAGATATTCAAGCTTTGTGGGTCGCCATCAGAGGATTACTGGAGGAAATTGCAGCTGCCTCATTCGACGGTTTTTAAGCCGGCACATCCATATCGAAGATGTGTAGATGAGTTGCTCAAGGAATATCCCCCTGCTGCAGTGGCACTTGTTGACACTTTGCTGTCTATCGATCCCGCCAAGCGAGGAACTGCAGCCGGTGCTTTGAAAAGTCAGTTCTTTACTTCAAAACCTTTCGCCTGTGATCCGTCGAGTTTGCCTAAATATCCTCCTAGCAAAGAGATCGACTCGAAAATGCGGGATGCGATCAGAAGGTATGCTAAAGATGTTTATCCTAGAGATTGGATCTCCTTTTTGAACTTTTCGACACTATCTCCCATCAGGCAGGAAAAGGCAGGAGGCAAGAGTCATAATGTCGATGGGGAAGGCAGACAAGGTAGAGAATCAAAGGATTATTCGCTGAACTTGAATATGGCCGTGTTTCAGAGACGACATGGCCATTCGAGCTCCGTAAGTAGAAGTGAGCAGCCAGTTTCAGGTTTTCTCGTAGCTCCTAAGGCGACAAAGGAAGAAAGTAGAGAGTCAAGCTCGAAGAGGCTTTCGCATTCAGGGCCGTTGATAAATGAACCTCCATGGATAAAACCAAGTGAAGAACCTACTCCTTTGCCAACCAGAGCCAGCTTGTCAACACTCTCTGGCCTGGTTGCAAAACGGATTTCTACATCCGAAGACCACAGAAATAGAGCAGCTCCTTCACATCCAAACCCCATAAATCAACGTCTGAAATCGCCCGAGTTGATAATTGAGATGGAGTTGACAAGAAAGCATGATCAGAAACGGTATACACACAGAGTTGCAGATTCTTATCAGATTGAAAATCAAAGGGCCCATGCTAAAGAGCCAACCTCGCATTATCGCGGGGCTAAGGCCAACAAAATCTACACATCCGGGCCGATTCTAGGTCCATCCGACAATGTGGAACAAATTCTTAAAGAACGAGACAGACAGATTCAAGAATTCGCAAGACAAGCTCGAAACGGTAAATTTCAGCTAGTAACAGGGGCCAGAACGCATGCATCTAGCCGTGGAGCATGA 1830 44.86 MGCVYAKPLAVEDSQKDRLKEHKVPGSNSSRAEEIIRLKSIGQGTYSSVYKARDLIHDKLVALKRVKFDNLDIESVEFMAREILILRRLNHPNIIKLEGLITTPRSCSLYLVFEYMEHDLLGLASRPGVEFTEPQIKCYMQQLLRGLDYCHNHGVLHRDIKGSNLLIDDKGLLKIADFGLASFYDPDNGVPLTTRVVTLWYRPPELLLGVSHYGVAVDMWSVGCILAELYTGKPLLPGKTEVEQLHKIFKLCGSPSEDYWRKLQLPHSTVFKPAHPYRRCVDELLKEYPPAAVALVDTLLSIDPAKRGTAAGALKSQFFTSKPFACDPSSLPKYPPSKEIDSKMRDAIRRYAKDVYPRDWISFLNFSTLSPIRQEKAGGKSHNVDGEGRQGRESKDYSLNLNMAVFQRRHGHSSSVSRSEQPVSGFLVAPKATKEESRESSSKRLSHSGPLINEPPWIKPSEEPTPLPTRASLSTLSGLVAKRISTSEDHRNRAAPSHPNPINQRLKSPELIIEMELTRKHDQKRYTHRVADSYQIENQRAHAKEPTSHYRGAKANKIYTSGPILGPSDNVEQILKERDRQIQEFARQARNGKFQLVTGARTHASSRGA 609
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5007300 5010250 - Bda023544.2 Bda06g00303 7885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00303 609 PANTHER CYCLIN-DEPENDENT KINASE 31 354 - -
Bda06g00303 609 PANTHER CYCLIN-DEPENDENT KINASE 373 593 - -
Bda06g00303 609 MobiDBLite consensus disorder prediction 375 396 - -
Bda06g00303 609 ProSitePatterns Protein kinases ATP-binding region signature. 41 64 IPR017441 GO:0005524
Bda06g00303 609 CDD STKc_CDK9_like 37 319 - -
Bda06g00303 609 Gene3D Phosphorylase Kinase; domain 1 30 122 - -
Bda06g00303 609 SUPERFAMILY Protein kinase-like (PK-like) 37 325 IPR011009 -
Bda06g00303 609 ProSiteProfiles Protein kinase domain profile. 35 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g00303 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Bda06g00303 609 MobiDBLite consensus disorder prediction 378 394 - -
Bda06g00303 609 MobiDBLite consensus disorder prediction 409 471 - -
Bda06g00303 609 Pfam Protein kinase domain 38 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g00303 609 PANTHER CELL DIVISION PROTEIN KINASE 31 354 - -
Bda06g00303 609 PANTHER CELL DIVISION PROTEIN KINASE 373 593 - -
Bda06g00303 609 SMART serkin_6 35 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g00303 609 Gene3D Transferase(Phosphotransferase) domain 1 123 355 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00410 Bda-Chr2:44671074 Bda06g00303 Bda-Chr6:5007300 1.81E-08 dispersed
Bda06g00303 Bda-Chr6:5007300 Bda09g00506 Bda-Chr9:6707338 0 dispersed
Bda06g00303 Bda-Chr6:5007300 Bda06g00304 Bda-Chr6:5015192 2.70E-82 tandem
Bda10g00744 Bda-Chr10:41799319 Bda06g00303 Bda-Chr6:5007300 5.01E-21 transposed
Bda13g00667 Bda-Chr13:7607692 Bda06g00303 Bda-Chr6:5007300 0 wgd
Bda06g00303 Bda-Chr6:5007300 Bda07g00297 Bda-Chr7:4073929 8.87E-149 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69661 PF00069 Pkinase 7.50E-68 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00303 - - csv:101207826 687.182