Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda06g00303 | ATGGGTTGTGTATATGCTAAGCCTTTGGCTGTTGAAGACAGCCAGAAAGACAGATTGAAAGAACATAAAGTTCCGGGCTCGAATTCATCAAGAGCAGAAGAGATTATTCGATTGAAATCGATTGGGCAGGGAACTTATAGCAGTGTTTACAAGGCTCGTGATCTAATTCACGATAAATTAGTAGCTTTAAAGAGAGTGAAATTTGATAATCTCGACATCGAAAGTGTCGAGTTTATGGCAAGGGAAATCCTTATTTTGCGCCGGCTCAACCATCCAAATATCATAAAACTAGAAGGCTTAATTACAACCCCAAGGTCTTGCAGCTTGTACCTTGTTTTCGAGTACATGGAACACGACCTTCTGGGATTGGCATCACGTCCAGGAGTCGAATTCACAGAACCGCAGATTAAATGCTATATGCAACAACTTCTACGGGGGCTCGATTACTGTCACAATCATGGGGTCTTGCATCGTGACATTAAGGGCTCAAATCTTCTTATCGATGACAAGGGGCTTTTGAAGATTGCAGATTTTGGTCTAGCGAGTTTTTACGACCCTGATAATGGTGTTCCTTTGACGACTCGGGTAGTGACACTATGGTATAGACCACCTGAACTCTTACTTGGAGTTTCCCATTATGGAGTTGCAGTCGATATGTGGAGCGTTGGTTGTATTCTCGCAGAGCTTTACACTGGAAAGCCATTGTTACCAGGAAAAACTGAGGTTGAACAACTGCATAAGATATTCAAGCTTTGTGGGTCGCCATCAGAGGATTACTGGAGGAAATTGCAGCTGCCTCATTCGACGGTTTTTAAGCCGGCACATCCATATCGAAGATGTGTAGATGAGTTGCTCAAGGAATATCCCCCTGCTGCAGTGGCACTTGTTGACACTTTGCTGTCTATCGATCCCGCCAAGCGAGGAACTGCAGCCGGTGCTTTGAAAAGTCAGTTCTTTACTTCAAAACCTTTCGCCTGTGATCCGTCGAGTTTGCCTAAATATCCTCCTAGCAAAGAGATCGACTCGAAAATGCGGGATGCGATCAGAAGGTATGCTAAAGATGTTTATCCTAGAGATTGGATCTCCTTTTTGAACTTTTCGACACTATCTCCCATCAGGCAGGAAAAGGCAGGAGGCAAGAGTCATAATGTCGATGGGGAAGGCAGACAAGGTAGAGAATCAAAGGATTATTCGCTGAACTTGAATATGGCCGTGTTTCAGAGACGACATGGCCATTCGAGCTCCGTAAGTAGAAGTGAGCAGCCAGTTTCAGGTTTTCTCGTAGCTCCTAAGGCGACAAAGGAAGAAAGTAGAGAGTCAAGCTCGAAGAGGCTTTCGCATTCAGGGCCGTTGATAAATGAACCTCCATGGATAAAACCAAGTGAAGAACCTACTCCTTTGCCAACCAGAGCCAGCTTGTCAACACTCTCTGGCCTGGTTGCAAAACGGATTTCTACATCCGAAGACCACAGAAATAGAGCAGCTCCTTCACATCCAAACCCCATAAATCAACGTCTGAAATCGCCCGAGTTGATAATTGAGATGGAGTTGACAAGAAAGCATGATCAGAAACGGTATACACACAGAGTTGCAGATTCTTATCAGATTGAAAATCAAAGGGCCCATGCTAAAGAGCCAACCTCGCATTATCGCGGGGCTAAGGCCAACAAAATCTACACATCCGGGCCGATTCTAGGTCCATCCGACAATGTGGAACAAATTCTTAAAGAACGAGACAGACAGATTCAAGAATTCGCAAGACAAGCTCGAAACGGTAAATTTCAGCTAGTAACAGGGGCCAGAACGCATGCATCTAGCCGTGGAGCATGA | 1830 | 44.86 | MGCVYAKPLAVEDSQKDRLKEHKVPGSNSSRAEEIIRLKSIGQGTYSSVYKARDLIHDKLVALKRVKFDNLDIESVEFMAREILILRRLNHPNIIKLEGLITTPRSCSLYLVFEYMEHDLLGLASRPGVEFTEPQIKCYMQQLLRGLDYCHNHGVLHRDIKGSNLLIDDKGLLKIADFGLASFYDPDNGVPLTTRVVTLWYRPPELLLGVSHYGVAVDMWSVGCILAELYTGKPLLPGKTEVEQLHKIFKLCGSPSEDYWRKLQLPHSTVFKPAHPYRRCVDELLKEYPPAAVALVDTLLSIDPAKRGTAAGALKSQFFTSKPFACDPSSLPKYPPSKEIDSKMRDAIRRYAKDVYPRDWISFLNFSTLSPIRQEKAGGKSHNVDGEGRQGRESKDYSLNLNMAVFQRRHGHSSSVSRSEQPVSGFLVAPKATKEESRESSSKRLSHSGPLINEPPWIKPSEEPTPLPTRASLSTLSGLVAKRISTSEDHRNRAAPSHPNPINQRLKSPELIIEMELTRKHDQKRYTHRVADSYQIENQRAHAKEPTSHYRGAKANKIYTSGPILGPSDNVEQILKERDRQIQEFARQARNGKFQLVTGARTHASSRGA | 609 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 5007300 | 5010250 | - | Bda023544.2 | Bda06g00303 | 7885 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda06g00303 | 609 | PANTHER | CYCLIN-DEPENDENT KINASE | 31 | 354 | - | - | |
Bda06g00303 | 609 | PANTHER | CYCLIN-DEPENDENT KINASE | 373 | 593 | - | - | |
Bda06g00303 | 609 | MobiDBLite | consensus disorder prediction | 375 | 396 | - | - | |
Bda06g00303 | 609 | ProSitePatterns | Protein kinases ATP-binding region signature. | 41 | 64 | IPR017441 | GO:0005524 | |
Bda06g00303 | 609 | CDD | STKc_CDK9_like | 37 | 319 | - | - | |
Bda06g00303 | 609 | Gene3D | Phosphorylase Kinase; domain 1 | 30 | 122 | - | - | |
Bda06g00303 | 609 | SUPERFAMILY | Protein kinase-like (PK-like) | 37 | 325 | IPR011009 | - | |
Bda06g00303 | 609 | ProSiteProfiles | Protein kinase domain profile. | 35 | 319 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda06g00303 | 609 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 155 | 167 | IPR008271 | GO:0004672|GO:0006468 | |
Bda06g00303 | 609 | MobiDBLite | consensus disorder prediction | 378 | 394 | - | - | |
Bda06g00303 | 609 | MobiDBLite | consensus disorder prediction | 409 | 471 | - | - | |
Bda06g00303 | 609 | Pfam | Protein kinase domain | 38 | 319 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda06g00303 | 609 | PANTHER | CELL DIVISION PROTEIN KINASE | 31 | 354 | - | - | |
Bda06g00303 | 609 | PANTHER | CELL DIVISION PROTEIN KINASE | 373 | 593 | - | - | |
Bda06g00303 | 609 | SMART | serkin_6 | 35 | 319 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda06g00303 | 609 | Gene3D | Transferase(Phosphotransferase) domain 1 | 123 | 355 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00410 | Bda-Chr2:44671074 | Bda06g00303 | Bda-Chr6:5007300 | 1.81E-08 | dispersed | |
Bda06g00303 | Bda-Chr6:5007300 | Bda09g00506 | Bda-Chr9:6707338 | 0 | dispersed | |
Bda06g00303 | Bda-Chr6:5007300 | Bda06g00304 | Bda-Chr6:5015192 | 2.70E-82 | tandem | |
Bda10g00744 | Bda-Chr10:41799319 | Bda06g00303 | Bda-Chr6:5007300 | 5.01E-21 | transposed | |
Bda13g00667 | Bda-Chr13:7607692 | Bda06g00303 | Bda-Chr6:5007300 | 0 | wgd | |
Bda06g00303 | Bda-Chr6:5007300 | Bda07g00297 | Bda-Chr7:4073929 | 8.87E-149 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69661 | PF00069 | Pkinase | 7.50E-68 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda06g00303 | - | - | csv:101207826 | 687.182 |