Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda06g00304 | ATGGGATGCTTGAAAATTGCTGATTTTGGATTAGCCATCTTTTTTGATCCCCAGAAGGCGGTTCAAATGACTAGCAGGGTGATAACTCTGTGGTATCGACCGCCAGAACTTTTACTCGGAGCATCTCTGTATGGGGTTGGTGTGGATTTATGGAGCACTGGCTGTGTCTTAGGAGAGTTGTATGCTGGCAAGCCTATCTTGCCTGGAAAAACAGAGGTTGAACAGCTGCATAAGATATTTAAACTTTGCGGCTCACCGCCGGACGATTACTGGAATAAACTGAAATCACGACATTCGATAGCGATGAAACCTCCGACGACGTATTTACGACGTCTCAGAGATACTTTCCATGATTTTCCTACTCCTGCTCTAAAGCTTATCGATACTTTACTCGCTGTCGATCCTGCAGAGCGGGGAACTGCAGCCGAAGCCCTCAAGAGTGAGTTCTTCACGAGTAGCCCTCTCGCGTGTGATCCTTCGAGTTTGCCGAAATATTCTCCTTCCAAAGAGATTGATGCAAAGTTGTGGGAGGAAGAAGCAAGAAGGAAGGGAGTTTTAGGCATGAAAGGCCGAGTAGTTGAGCTAAATAGGAGAGAACAAAAGGTGCCGGGGGAAGTCAAGGCTGCTGAGTTAGCCAATTTATTGCAGAAAGTTAGAGAAGGCCAATCGAACTCGAAGATGCGAAATGGAATGAATAGGCCTAGAGGTCAAGTTGTTTCTCCTTTTCTGATTGGCGGACAAACTGGATTCTCGCATTCGGAACCCATAATTCACATACCAAATGTGTCAAATCTCGATATGAATATCGCCATGCCTTTAAAGATTCGAGCAACTTTTCAACTAAGCCAGCCGACGCTGATCAATCTATTCCTCATCGTTCATCAGCCAAATCGACAAATCAAGCTACTGTTGCAACTGATGTCCAAGCTGGTAGGAAACAGGAAAGAACACATCACCGTGATAGAAACATAG | 972 | 45.27 | MGCLKIADFGLAIFFDPQKAVQMTSRVITLWYRPPELLLGASLYGVGVDLWSTGCVLGELYAGKPILPGKTEVEQLHKIFKLCGSPPDDYWNKLKSRHSIAMKPPTTYLRRLRDTFHDFPTPALKLIDTLLAVDPAERGTAAEALKSEFFTSSPLACDPSSLPKYSPSKEIDAKLWEEEARRKGVLGMKGRVVELNRREQKVPGEVKAAELANLLQKVREGQSNSKMRNGMNRPRGQVVSPFLIGGQTGFSHSEPIIHIPNVSNLDMNIAMPLKIRATFQLSQPTLINLFLIVHQPNRQIKLLLQLMSKLVGNRKEHITVIET | 323 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 5015192 | 5016509 | - | Bda023545.1 | Bda06g00304 | 7886 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda06g00304 | 323 | SMART | serkin_6 | 1 | 150 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda06g00304 | 323 | ProSiteProfiles | Protein kinase domain profile. | 1 | 150 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda06g00304 | 323 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 188 | - | - | |
Bda06g00304 | 323 | SUPERFAMILY | Protein kinase-like (PK-like) | 2 | 156 | IPR011009 | - | |
Bda06g00304 | 323 | PANTHER | CELL DIVISION PROTEIN KINASE | 2 | 237 | - | - | |
Bda06g00304 | 323 | PANTHER | BINDING PROTEIN, PUTATIVE-RELATED | 2 | 237 | - | - | |
Bda06g00304 | 323 | Pfam | Protein kinase domain | 4 | 150 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda06g00304 | Bda-Chr6:5015192 | Bda07g00297 | Bda-Chr7:4073929 | 2.04E-95 | dispersed | |
Bda06g00303 | Bda-Chr6:5007300 | Bda06g00304 | Bda-Chr6:5015192 | 2.70E-82 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69662 | PF00069 | Pkinase | 4.70E-24 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda06g00304 | - | - | mnt:21388284 | 307.76 |