Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00304 ATGGGATGCTTGAAAATTGCTGATTTTGGATTAGCCATCTTTTTTGATCCCCAGAAGGCGGTTCAAATGACTAGCAGGGTGATAACTCTGTGGTATCGACCGCCAGAACTTTTACTCGGAGCATCTCTGTATGGGGTTGGTGTGGATTTATGGAGCACTGGCTGTGTCTTAGGAGAGTTGTATGCTGGCAAGCCTATCTTGCCTGGAAAAACAGAGGTTGAACAGCTGCATAAGATATTTAAACTTTGCGGCTCACCGCCGGACGATTACTGGAATAAACTGAAATCACGACATTCGATAGCGATGAAACCTCCGACGACGTATTTACGACGTCTCAGAGATACTTTCCATGATTTTCCTACTCCTGCTCTAAAGCTTATCGATACTTTACTCGCTGTCGATCCTGCAGAGCGGGGAACTGCAGCCGAAGCCCTCAAGAGTGAGTTCTTCACGAGTAGCCCTCTCGCGTGTGATCCTTCGAGTTTGCCGAAATATTCTCCTTCCAAAGAGATTGATGCAAAGTTGTGGGAGGAAGAAGCAAGAAGGAAGGGAGTTTTAGGCATGAAAGGCCGAGTAGTTGAGCTAAATAGGAGAGAACAAAAGGTGCCGGGGGAAGTCAAGGCTGCTGAGTTAGCCAATTTATTGCAGAAAGTTAGAGAAGGCCAATCGAACTCGAAGATGCGAAATGGAATGAATAGGCCTAGAGGTCAAGTTGTTTCTCCTTTTCTGATTGGCGGACAAACTGGATTCTCGCATTCGGAACCCATAATTCACATACCAAATGTGTCAAATCTCGATATGAATATCGCCATGCCTTTAAAGATTCGAGCAACTTTTCAACTAAGCCAGCCGACGCTGATCAATCTATTCCTCATCGTTCATCAGCCAAATCGACAAATCAAGCTACTGTTGCAACTGATGTCCAAGCTGGTAGGAAACAGGAAAGAACACATCACCGTGATAGAAACATAG 972 45.27 MGCLKIADFGLAIFFDPQKAVQMTSRVITLWYRPPELLLGASLYGVGVDLWSTGCVLGELYAGKPILPGKTEVEQLHKIFKLCGSPPDDYWNKLKSRHSIAMKPPTTYLRRLRDTFHDFPTPALKLIDTLLAVDPAERGTAAEALKSEFFTSSPLACDPSSLPKYSPSKEIDAKLWEEEARRKGVLGMKGRVVELNRREQKVPGEVKAAELANLLQKVREGQSNSKMRNGMNRPRGQVVSPFLIGGQTGFSHSEPIIHIPNVSNLDMNIAMPLKIRATFQLSQPTLINLFLIVHQPNRQIKLLLQLMSKLVGNRKEHITVIET 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5015192 5016509 - Bda023545.1 Bda06g00304 7886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00304 323 SMART serkin_6 1 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g00304 323 ProSiteProfiles Protein kinase domain profile. 1 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g00304 323 Gene3D Transferase(Phosphotransferase) domain 1 1 188 - -
Bda06g00304 323 SUPERFAMILY Protein kinase-like (PK-like) 2 156 IPR011009 -
Bda06g00304 323 PANTHER CELL DIVISION PROTEIN KINASE 2 237 - -
Bda06g00304 323 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 2 237 - -
Bda06g00304 323 Pfam Protein kinase domain 4 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00304 Bda-Chr6:5015192 Bda07g00297 Bda-Chr7:4073929 2.04E-95 dispersed
Bda06g00303 Bda-Chr6:5007300 Bda06g00304 Bda-Chr6:5015192 2.70E-82 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69662 PF00069 Pkinase 4.70E-24 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00304 - - mnt:21388284 307.76