Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00321 ATGGGGTGGAGGAAATCTGCTACTGTGCACAAGAATTTGAAGATCTATGCGCAGGTTCTGGGCTTCGTGTTGATCTGTGTGCCGCAGTTTTCTTGTGGATTAACTAATCCCAATGACTTTGCTGCAATTAGTGATTTACATGCCGCACTTGGCTACCCTATTCTTCCTGGTTGGGGCACTGGACAAGATCCCTGTGGTGATGCCTGGCAGGGTGTCGTGTGCAACGTTTCTGATATAGTAAAAATAGTTCTTAATGCGGCTAATCTGGGAGGAGGATTGGGTGACAATTTGAAAATGTTTACTTCTATAAATACGATAGATCTGAGTAATAATCGCATTGGAGGGAGCATACCATCCAACTTACCCGTGACGATGCAAAACTTTTTTCTTTCAGCTAATCGGTTTACTGGAAGCATTCCAAGTTCATTATCCACTTTGACTCAATTGACTGCTTTATCGTTGAATGAAAATTACCTGAGCGGGGAAATTCCCGATTCATTCGCAACCCTTTCTGGACTGGTTAACTTAGACTTGTCCAATAACAATTTGAGTGGGCCTCTACCTCTCTCTATGGAAAACTTGTTGGCTCTGACTACCCTGCGATTGCAGAACAATCAGCTTTCTGGTACACTTGATGTTCTACAAGATCTTCCACTCAAAGACTTGAATATAGAGAATAATCTGTTTTCTGGTCCAATACCTGCGAAGCTTATGAGCATACCGAATTTCAGCAGATATGATGGAAATCCATTCAATTCTTCTGTTTCTCCAGTACTGTCACCTTCACCTCCATCAAAACAATCACCGGTACCATTCTTTCCTCGAGAACCATCTCCGGAAAAGGCACCGCCGGAACTGGCTGACGGACCATCTTCATCAAATGAATCAAAATCAGGGAATAAAAAAAGGATAGTTTGGATATCAATTGCTGCGGCGTTATCGTTTATAATCTTGTCATTAGCGCTTATATTATTTATGCCAAGGTGTCTCAGAGGAAGTAGAGAGGATGACAGAAATTTTAAACAGCATCAAATTGTTCCAAAAGATGCTGTTGCAAAGCCAAAGGAGAGTCGTCAAGCAGAGACTCGAAGAATAGAAGCGATACCAGAACCAACAGCACTAAAGCAGGATTATCATGAGATAGATATTAGTGCTCTGGATGACTATTTAATTCCTCCACCTCCTCCTCTGCCTCCTCCTCTGCCTCCCCCTCCACCTCCACCTCCCCCTCCCCCTCCACCACCTTTTGCAGCGAAGATCAATAAGGAGACAATTATTCCAACCGAACTGCTTGCGGTGAAAAAACTGGATAAAAGGACTTGCAGTCAACAAAAGGATGATGACTTTCTTGAAATGGTTAATAATATTGATACAATACGCCATTATAATATTGTGGAGCTCATGGGTTACTGTGCGGAACATGATGAAAGGCTGCTTATCTATGAGTACTGTAATAATGGTACTCTGCAAGATGCACTACACTCCGAGGATGAAACCAAAAATAAACTTTCTTGGAATATCCGGTTGCAAATGGCTCTTGGAGCTGCTAGAGCCTTAGAGTATCTGCACGAGGTCTGTCAGCCTCCTGTCATGCATAGAAATTTCAAGTCTGCCAATATTCTTCTCGATGATGATTATTCTGTCCGTGTCTCCGATTGTGGTTTATCTCCTCTTATATCATCTGGCACTGTTAGTCAGTTGTCTGGTCATCTTCAATCTGTGTATGGATGGGGAGCCCCAGAGTATGAATCTGGAATTTACACTTTGAAGAGTGATGTTTACAGTTTTGGTGTGGTTATGCTAGAACTTTTGACAGGCCGGATGCCGTATGACAGGACGAGGATTAGAGGAGAACAATTTCTGGTGAGATGGGCGATTCCACAACTTCATGACATTGATGCATTGTCAAGAATGGTCGATCCATCTCTCGGTCTCGAATACCCAGCCAAATCCTTATCACACTTTGCGGACATCATATCCCGATGTGTTCAGTCTGAGCCTGAATTCAGGCCAGCAATGTCTGAAGTTGTTCAGGATTTGCTGGACATGATAAGAAGAGAGCCTCATGGGAGTGGATCAGCAGAAGATTAA 2091 43.04 MGWRKSATVHKNLKIYAQVLGFVLICVPQFSCGLTNPNDFAAISDLHAALGYPILPGWGTGQDPCGDAWQGVVCNVSDIVKIVLNAANLGGGLGDNLKMFTSINTIDLSNNRIGGSIPSNLPVTMQNFFLSANRFTGSIPSSLSTLTQLTALSLNENYLSGEIPDSFATLSGLVNLDLSNNNLSGPLPLSMENLLALTTLRLQNNQLSGTLDVLQDLPLKDLNIENNLFSGPIPAKLMSIPNFSRYDGNPFNSSVSPVLSPSPPSKQSPVPFFPREPSPEKAPPELADGPSSSNESKSGNKKRIVWISIAAALSFIILSLALILFMPRCLRGSREDDRNFKQHQIVPKDAVAKPKESRQAETRRIEAIPEPTALKQDYHEIDISALDDYLIPPPPPLPPPLPPPPPPPPPPPPPPFAAKINKETIIPTELLAVKKLDKRTCSQQKDDDFLEMVNNIDTIRHYNIVELMGYCAEHDERLLIYEYCNNGTLQDALHSEDETKNKLSWNIRLQMALGAARALEYLHEVCQPPVMHRNFKSANILLDDDYSVRVSDCGLSPLISSGTVSQLSGHLQSVYGWGAPEYESGIYTLKSDVYSFGVVMLELLTGRMPYDRTRIRGEQFLVRWAIPQLHDIDALSRMVDPSLGLEYPAKSLSHFADIISRCVQSEPEFRPAMSEVVQDLLDMIRREPHGSGSAED 696
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5260118 5265465 + Bda023562.2 Bda06g00321 7903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00321 696 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 24 371 - -
Bda06g00321 696 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 428 695 - -
Bda06g00321 696 Gene3D Transferase(Phosphotransferase) domain 1 484 688 - -
Bda06g00321 696 Pfam Protein tyrosine and serine/threonine kinase 430 680 IPR001245 GO:0004672|GO:0006468
Bda06g00321 696 SUPERFAMILY Protein kinase-like (PK-like) 428 680 IPR011009 -
Bda06g00321 696 Gene3D Phosphorylase Kinase; domain 1 417 483 - -
Bda06g00321 696 MobiDBLite consensus disorder prediction 262 284 - -
Bda06g00321 696 PANTHER OS01G0253100 PROTEIN 428 695 IPR045271 GO:0004714|GO:0006468
Bda06g00321 696 PANTHER OS01G0253100 PROTEIN 24 371 IPR045271 GO:0004714|GO:0006468
Bda06g00321 696 Gene3D Ribonuclease Inhibitor 36 261 IPR032675 -
Bda06g00321 696 ProSiteProfiles Protein kinase domain profile. 340 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g00321 696 MobiDBLite consensus disorder prediction 392 417 - -
Bda06g00321 696 Pfam Leucine rich repeat 126 183 IPR001611 GO:0005515
Bda06g00321 696 SUPERFAMILY L domain-like 53 242 - -
Bda06g00321 696 MobiDBLite consensus disorder prediction 254 298 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00321 Bda-Chr6:5260118 Bda09g01596 Bda-Chr9:47377168 5.92E-38 dispersed
Bda07g01009 Bda-Chr7:11865319 Bda06g00321 Bda-Chr6:5260118 0 transposed
Bda13g00653 Bda-Chr13:7491609 Bda06g00321 Bda-Chr6:5260118 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69664 PF07714 PK_Tyr_Ser-Thr 2.20E-43 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00321 - - gmx:100814012 752.281