Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00343 ATGAAAAATATTATGTGTATTAGATCAAGGGAAGAAGGCAGATATTGGTTCAACAAGTGTATTGAGCTGGTTTTCGACTGGCCGAATTCTCCGAGAAGAAATCTGGGTAGTAAATCAAATCAAATTCAAAATTCCCCATCACCATCACCTAATGATGCCCCGTCATCGTCTGTCTCTGCACCCATTTCTCCTCCGCTGCCTGATTTGCAACTTCCTGTCGAGGCTCCATTGCCATCGCCACCTTCCAGTTTGATCGAGAGTGATATTGCTCCTCCTGCCAAACGCCATCTGCCTATTCCTAAAGCCACTCCACCTTCAAATAAGCAAGAAGAAGGGCAGAATATAGTTATGATTGCTGTGACTGCTGGAGGAGCTGTTATCATCATAGCGCTTATATTATGTTGCTGCATTAAGAGTAGGGGAAATAAGGTTGTAAATGGTCAAAAGGATGAAAGGCCATTGTTGAATTTTTCTCTGAGCGATTTCTCAGCAGGATCTTCACAGAAATCTTTTAGTGTAGGAACATCAAGTAATAAAGAATTCAGTGTAAGTAGTGGAAAGATTACCACTTTGGCTTCGATTTTATCGATGAAGCCGGAAGATGATACCTTCATGGCTGAGGATGAATTATCTGAAGCTAAATCTCTGGCGCCATTTCCTCCCTTAAGATTGCCTCCTGGAAGACCAGGTTCTCAGCCGCCTGCCCCACCTGCTCCTCCTCCTCCTCCACCTCCTGCACCTTCTCCCCCGCCACCACCTCCGAAAGTTACTCGGCCTCCACCTCTTCCGCCAAAGGCAATGCCTGGAAAGACAAAGCTGCCACCATTGGGGCCTCATAGCCGAGGAAATAGTGCTTCAAGTGAAAGCAAAGATGACGATGATTCTGCATCTCAAAGGGCCAAGTTGAAGCCATTTTTCTGGGATAAGGTCCTTGCTAATCCTGATCAATCAATGGTGTGGCACGATATTAGTGCCGGGTCATTCCAGTTCAACGAAGAGATGATCGAGTCTTTATTTGGTTATGCCAACGTGAATAAGAACAAAACAAACCGCAGGAAAGAGTCATCCTCCCTCGACCCTTCAATCCAATATATTCAGATCATCGATGGAAACGAACTTCCAGTCGAGCTGCTCCAAACATTGTTGAAGATGGCACCAACGACAGAAGAGGAATTGAAGTTAAGGTTATTTAGTGGGGATCTTTCTCACCTTGGCCCTGCAGAGAGATTCCTCAAATTATTAGTAGACATCCCATTTTCGTTCAAAAGAATAGACTCGCTTCTCTTCATGTGCTCTCTCCAGGAAGAGCTCTCTGGCATTAAAGAGTCCTTTGCAACTCTTGAGGTTGCTTGCAACAAACTCAGACACAGCAGGCTATTCCTAAAGCTCTTAGAAGCAGTTCTTAAAACCGGTAATCGGATGAACGATGGTACTTTCCGGGGAAGTGCGCAGGCGTTTAAACTCGACACGCTCTTGAAACTGGCCGATGTTAAAGGAACAGATGGAAAGACTACACTCTTGCACTTTGTCGTTCAGGAGATTATACGATCCGAAGGCATTCGGGCTGCAAGAACAGCAAGAGAAAGCCGAAGCATGTCAAGTGTAAAATCAGGGGAGTACTCTGAAGATATTTTGGGGGAATCCACAGACCATTATCGCCAACTTGGTCTGCAGGTCGTCTCCGGATTAAGCACTGAACTTGTAGATGTCAAAAAGGCATCAGTAATAGATGCCGACGGACTTACAGCTACGGTCTCAAGACTCGGAAATGCAATCATTAAAACGAGAGATTTCTTAGCTAACGAGATGACGAACCTCGACGAAGAAAGCAAATTCTATCAGACACTGTCGAGTTTTGTGGAGCAGAAAGAACCAGAAATCGTGGAGATCTTAGAGGAAGAGAAGAAAATCAGGACTCTGGTAAAGAGCACAGGGGACTATTTCCATGGAAATTCTGGAAAAGATGAAGGTTTGAGACTATTTGTGATTGTACGTGATTTTCTGATAATGCTAGATAAGGCATGTAAAGATGTTAGAGATGGTGCAGCCCAGAAGACAAGTATTTCCAAGAAAGCAAATCAAGTAACATCTCCTTCTCGACAGCAACGTTTAGATATCCACCAGAGACTATTTCCGGTAATTGCAGGACGGAGAAATGATGCATCGAGTTCAGACGATGAGGGCTCATCTCCGTAG 2196 44.63 MKNIMCIRSREEGRYWFNKCIELVFDWPNSPRRNLGSKSNQIQNSPSPSPNDAPSSSVSAPISPPLPDLQLPVEAPLPSPPSSLIESDIAPPAKRHLPIPKATPPSNKQEEGQNIVMIAVTAGGAVIIIALILCCCIKSRGNKVVNGQKDERPLLNFSLSDFSAGSSQKSFSVGTSSNKEFSVSSGKITTLASILSMKPEDDTFMAEDELSEAKSLAPFPPLRLPPGRPGSQPPAPPAPPPPPPPAPSPPPPPPKVTRPPPLPPKAMPGKTKLPPLGPHSRGNSASSESKDDDDSASQRAKLKPFFWDKVLANPDQSMVWHDISAGSFQFNEEMIESLFGYANVNKNKTNRRKESSSLDPSIQYIQIIDGNELPVELLQTLLKMAPTTEEELKLRLFSGDLSHLGPAERFLKLLVDIPFSFKRIDSLLFMCSLQEELSGIKESFATLEVACNKLRHSRLFLKLLEAVLKTGNRMNDGTFRGSAQAFKLDTLLKLADVKGTDGKTTLLHFVVQEIIRSEGIRAARTARESRSMSSVKSGEYSEDILGESTDHYRQLGLQVVSGLSTELVDVKKASVIDADGLTATVSRLGNAIIKTRDFLANEMTNLDEESKFYQTLSSFVEQKEPEIVEILEEEKKIRTLVKSTGDYFHGNSGKDEGLRLFVIVRDFLIMLDKACKDVRDGAAQKTSISKKANQVTSPSRQQRLDIHQRLFPVIAGRRNDASSSDDEGSSP 731
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5477832 5480479 - Bda023582.1 Bda06g00343 7925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00343 731 Gene3D Formin, FH2 domain 299 709 IPR042201 -
Bda06g00343 731 MobiDBLite consensus disorder prediction 217 297 - -
Bda06g00343 731 SUPERFAMILY Formin homology 2 domain (FH2 domain) 240 685 - -
Bda06g00343 731 MobiDBLite consensus disorder prediction 164 185 - -
Bda06g00343 731 SMART it6_source 292 686 IPR015425 -
Bda06g00343 731 MobiDBLite consensus disorder prediction 34 74 - -
Bda06g00343 731 PANTHER FORMIN-RELATED 29 369 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Bda06g00343 731 PANTHER FORMIN-RELATED 369 727 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Bda06g00343 731 PANTHER FORMIN-LIKE PROTEIN 3 369 727 - -
Bda06g00343 731 ProSiteProfiles Formin homology-2 (FH2) domain profile. 258 697 IPR015425 -
Bda06g00343 731 PANTHER FORMIN-LIKE PROTEIN 3 29 369 - -
Bda06g00343 731 MobiDBLite consensus disorder prediction 34 63 - -
Bda06g00343 731 MobiDBLite consensus disorder prediction 219 271 - -
Bda06g00343 731 Pfam Formin Homology 2 Domain 367 671 IPR015425 -
Bda06g00343 731 Pfam Formin Homology 2 Domain 297 370 IPR015425 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00343 Bda13g00633 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00343 Bda-Chr6:5477832 Bda07g00336 Bda-Chr7:4440760 4.90E-06 dispersed
Bda13g00633 Bda-Chr13:7306308 Bda06g00343 Bda-Chr6:5477832 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00343 - - tcc:18608541 644.425