Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00362 ATGGAGTTCTCTTTATCTGGAATCGGGAAGAACGGGCCAATCTTCATCTGTAGGGCATTGTTTGTGTTGAGTTTGCACATATGGCTGCTAATTGGAGTAATGGGTGGGACAGGAAATGGCAGTGCTTTTCCGAGCGTAGTGAATATTGGTGCTTTGTTTACTGTTGACTCGGTGATTGGAAGGTCTGCAAAGCCCGGAATTTTAGCTGCATTGGACGATGTCAATGCTGATACAACTGTTCTTCCTCACACTAAGTTGAATGTGATTTTACACGATACAAATTGCAGTGGCTTTATAGGAACTGTGGAAGCTTTGCAGCTAATGGAAGATGAAGTAGTTACTGCAATTGGCCCACAATCCTCTGGAATATCTCATATCATTTCCCATGTTGTTGACGAACTTCAAGTGCCCCTTCTATCTTTTGCATCAACAGATCCGACCCTTTCAGCTCTACAATTTCCGTATTTTGTTCGGACTACACAGAGTGATTATTTCCAGATGAAGGCAATTGCTGATCTGATAGAGTATTATGGATGGAGAGAGGTCATTGCTATATTTGTGGATGATGATTACGGAAGAAGCGGAATATCAGTTTTAGGTGATGCACTTGCTAAAAAGCGATCAAAAATTTCTTTCAAGGCTGCTATCTCTCCTGGGGCCTCTAGAAGTGATGTCAATGACTTGTTGGTTGGGGTAAATCTCATGGAATCTCGTGTATATGTTGTGCATGTCAATCCCGACTCTGGTTTGTCGATATTTTCTGTTGCAAATAGTCTTGGAATGATGAGTGGTGGCTATGTGTGGATTGCTACGGATTGGCTTCCTTCTCTTCTTGATTCGTTAGAAACGGCTAGCCCGGATGTTATGAATCTCATACAAGGAGTTGTTGCTCTTCGTCACCACATCCCTAACGATGATCTAAGAACAAAAACTGCTTCAAAATGGAAGAACCGAAATTACAATTCAACCCAAAACTTGAATAGTTACGCGTTTTATGCATATGACTCCATCTGGTTAGCAGCCCGTGCTCTTGACTCTTTCTTCAAAGAAGGTGGGAATATATCTTTCTCTGGTGACTCGAGTTTGGACGATACACGTGGCAGTGTGCTTCATCTATCATCGCTCCGAATTTTCGATGGGGGAAAACAGCTTCTACAGACAATTTTGAGAACAAACTTCACTGGTCTGAGTGGTCAGATTCAATTTGATCGAGAGAAGAACTTAGTTCATCCAGCATACGATATTCTCAACATCGGTGGAACTGGTTTACGTAGAGTTGGTTATTGGTCGAATCATTCGAGTTTATCAACCGTTCCTCCTGAGACTTTATATTCAACGCCACTCAACAGTTCTTCTGGTAGTTTAGGTCTTTACAGCATAATATGGCCGGGTGAAACGACAACAACTCCTCGTGGATGGGTATTTCCGAACAACGGAAAGCCCCTTCGGATTGCAGTGCCGTATAGAGTGAGCTACAAAGAATTTGTGTCGAAAGACTCTAGTCCTCCTGGCGTTAAAGGGTTCTGTATTGACGTGTTTGAGGCTGCCATAAACTTGCTGCCTTATCCAGTTCCACGTGAGTTTATATTATACGGAGACGGAAAGGAAAATCCTTCGTACAATAATATTGTTTATGATGTTTATCAAAATAAATTCGATGCTGCCGTTGGTGATGTTACGATCGTCACGAATCGGACGAAGCTCGTGGACTTCACTCAGCCTTTCATGACTTCAGGGCTCGTTGTCGTGGCCACGGTCAGAGAGGCGAAGTCTAGTCCTTGGGCTTTCCTCCGCCCGTTCACGATTCAAATGTGGTTTGTCACTGCTTCATTCTTCCTTTTTATAGGAGCCGTTGTTTGGATTCTTGAGCATCGTATTAATCCGGAGTTTCGTGGGCCACCCAGAAAACAACTCATTACAATATTTTGGTTCAGTTTTTCGACAATGTTCTTTTCCCACAGAGAAAACACAATGAGCACTTCTGGCCGGTTTGTACTACTAATATGGCTATTTGTGGTGTTAATTATTAATTCAAGTTACACGGCTAGCTTGACGTCGATTCTTACGGTGCAACAGCTGACATCGAAGATTGAAGGGTTGAATACCTTAATCTCGAGTACCGATCCAATCGGAATTCAAGTAGGATCATTTGCGTATAATTATCTGACTGAGGAATTGAATATAGCACAGTCTAGGATCATTCAGTTGAAAGGGCTGGAAGAATATACTACCGCTCTTCAGAAAGGGCCCGGAGGCGGCGGAGTAGCTGCCATTGTTGACGAGCTTCCGTATATCGAGAGGTTTTTGACAAGCACCAATTGTGCATTCAGGACTGTTGGACAAGAGTTCACAAAAAGTGGATGGGGATTTGCATTTCAGAGGGACTCTCCTCTCGCCATTGATTTATCGACGGCAATTCTTCAACTGTCGGAGAATGGCGATCTTCAAAAGATTCACGATAAATGGCTCTCGACGACTCAATGCTCTATGCAGCTCAACCAAGTCGATGCGAATGAGTTATCTCTCGATAGCTTTTGGGGACTTTTTCTTATTTGTGGCATTGCATGCTTCCTCGCGCTTCTCGTGTTCTTCTTTCGTGTTATCTGCCAATACCTCAAATTCGTACCCCATCCCGAACCCCAAGCTGATACCGAGGATATCGAAGCTGCTCGAACGATAAAGTCGACTGATTCAAGTAGCTTCAAACGATTGATCAATTTTGTAGATAAGAAAGAAGTAGAGATTAAGCATATGCTAAAGCGAACGATAATCGACAGAAATCAAGCTAGCCAGAGCTCTAATGTGCATTCGATTTCACCGTCTTGA 2826 43.06 MEFSLSGIGKNGPIFICRALFVLSLHIWLLIGVMGGTGNGSAFPSVVNIGALFTVDSVIGRSAKPGILAALDDVNADTTVLPHTKLNVILHDTNCSGFIGTVEALQLMEDEVVTAIGPQSSGISHIISHVVDELQVPLLSFASTDPTLSALQFPYFVRTTQSDYFQMKAIADLIEYYGWREVIAIFVDDDYGRSGISVLGDALAKKRSKISFKAAISPGASRSDVNDLLVGVNLMESRVYVVHVNPDSGLSIFSVANSLGMMSGGYVWIATDWLPSLLDSLETASPDVMNLIQGVVALRHHIPNDDLRTKTASKWKNRNYNSTQNLNSYAFYAYDSIWLAARALDSFFKEGGNISFSGDSSLDDTRGSVLHLSSLRIFDGGKQLLQTILRTNFTGLSGQIQFDREKNLVHPAYDILNIGGTGLRRVGYWSNHSSLSTVPPETLYSTPLNSSSGSLGLYSIIWPGETTTTPRGWVFPNNGKPLRIAVPYRVSYKEFVSKDSSPPGVKGFCIDVFEAAINLLPYPVPREFILYGDGKENPSYNNIVYDVYQNKFDAAVGDVTIVTNRTKLVDFTQPFMTSGLVVVATVREAKSSPWAFLRPFTIQMWFVTASFFLFIGAVVWILEHRINPEFRGPPRKQLITIFWFSFSTMFFSHRENTMSTSGRFVLLIWLFVVLIINSSYTASLTSILTVQQLTSKIEGLNTLISSTDPIGIQVGSFAYNYLTEELNIAQSRIIQLKGLEEYTTALQKGPGGGGVAAIVDELPYIERFLTSTNCAFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHDKWLSTTQCSMQLNQVDANELSLDSFWGLFLICGIACFLALLVFFFRVICQYLKFVPHPEPQADTEDIEAARTIKSTDSSSFKRLINFVDKKEVEIKHMLKRTIIDRNQASQSSNVHSISPS 941
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5820368 5824709 - Bda023610.1 Bda06g00362 7944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00362 941 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 120 148 - -
Bda06g00362 941 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 333 345 - -
Bda06g00362 941 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 60 76 - -
Bda06g00362 941 Gene3D - 477 591 - -
Bda06g00362 941 SUPERFAMILY Periplasmic binding protein-like I 41 474 IPR028082 -
Bda06g00362 941 Gene3D - 69 410 - -
Bda06g00362 941 Gene3D - 592 730 - -
Bda06g00362 941 CDD GluR_Plant 480 823 - -
Bda06g00362 941 SUPERFAMILY Periplasmic binding protein-like II 456 823 - -
Bda06g00362 941 SMART GluR_14 483 825 IPR001320 GO:0015276|GO:0016020
Bda06g00362 941 PIRSF IGluLR_plant 16 941 IPR017103 -
Bda06g00362 941 CDD PBP1_GABAb_receptor_plant 48 439 IPR044440 -
Bda06g00362 941 Pfam Receptor family ligand binding region 65 419 IPR001828 -
Bda06g00362 941 PANTHER GLUTAMATE RECEPTOR 3.4 38 923 - -
Bda06g00362 941 Pfam Bacterial extracellular solute-binding proteins, family 3 498 824 IPR001638 -
Bda06g00362 941 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 38 923 - -
Bda06g00362 941 Gene3D - 162 434 - -
Bda06g00362 941 Pfam Ligand-gated ion channel 825 856 IPR001320 GO:0015276|GO:0016020
Bda06g00362 941 Gene3D - 770 830 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00362 Bda-Chr6:5820368 Bda13g01579 Bda-Chr13:39292530 1.66E-125 dispersed
Bda06g00362 Bda-Chr6:5820368 Bda06g00363 Bda-Chr6:5826755 0 tandem
Bda04g00209 Bda-Chr4:7957263 Bda06g00362 Bda-Chr6:5820368 0 transposed
Bda11g00980 Bda-Chr11:9538303 Bda06g00362 Bda-Chr6:5820368 0 transposed
Bda13g00619 Bda-Chr13:7223594 Bda06g00362 Bda-Chr6:5820368 0 wgd
Bda06g00362 Bda-Chr6:5820368 Bda07g00261 Bda-Chr7:3499091 7.54E-87 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00362 K05387 - qsu:112026600 1363.59