Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00363 ATGAAGAATTTCGTTGTGGGTTTGTTTATTTTGATGTGGGTGGTTTTTGTTGATTCTATTCTGTGCGAGAGTCTTGCTGTCGTGAACGTTGGTGCAGTTTTTACTTTCGATTCGGTCATCGGAAGAGCCGCAAAGACAGCAATGGAAGCCGCCGTCTCGGACATAAATGCCGACCCTACCATTCTCAACGGTACAAAGCTGAATTTGATTATGGAGGACGTAGACTGCAATGTCTTCCTGGGTTCCATTAGAGCGTTTCAGGTGCTTGAGAAAGAGGTTGTGGCCATTGTAGGGCCTCAGTCTTCTTCCATAGCTCATATGATTTCTCAGATCGCCAATGGTTTCCAAGTGCCTCTTGTCTCATATGCTGCCACTGATCCAACTTTGTCAGCCCTCCAATTTCCCTACTTTGTCCGAACTGCACCAAGTGATTCCTATCAAATGGCTGCCATGGCTGAATTGATTGACTTTTATGGGTGGAAAGAGGTCATCGCCATCTTCGAGGACAACAATTATGGAAGAAACGGAATATCTGCTTTAGATAATGAGCTCCAGAAGAAGATGGCTAAAGTTTCTCATAAATTGCCCATGCATCCCCTATTTAATCACAGCGAGATCGCTCATTTTCTCAATAATTCAAAATTACTTGGTCCTCGTGTGTATGTTGTTCATGTTAGTCCTGATCCCAGATTAAGAATATTTAGGATAGCTGACAAGCTTCAAATGATGACCAACAACTATGTATGGCTTGCTACAGATTGGCTTTTAACAACATTAGATTCACTCTCTCCTACTGATCTATCTTCTCTGGACAGCCTACAAGGCATTGTCGGACTCCGTCAACATTTTCCAGCATCGAATCAGAAGATAGCTTTTTTGTCTCGATTGAGCAAGCAAGAAGGTTCCGTAAGTTCTGCGCATTATGCCTATGCACTTATTGCTTACGATACAATATGGTTAGTTGCTCGCTCGATTGATAAGTTTCTAAAAACGAATGGGAACTTGACATTTTCCTTGACAGATAAGTTACAAAATATGAATGCATCTAGAATTCACCTGGGCGATCTCAAAATCTTTAGTGGTGGAGATCTTCTTCTGAGCATACTATTGAAAACAAATTTCACTGGTTTAACTGGTCAAGTTCGATTTAGTTCAGATCGTAATCGTGTTGGTGGCAGTTATGGTGTGATAAACATTGACCGAGGAACTGCTCGGGAAGTTGGTTTTTGGTCTAATGCCTCAGGCTTTACAGTTTTACCACCAGAAACTCTTAATGAGAAACAAATTAGCTATTCTCGTCTAAATCAGGAGCTTGGCAATGTGACTTGGCCTGGTGGAACGACAAATAGACCACAGGGCTGGGTTATTGCAGATAATGCGAAGCCTCTGAAAATTGGAGTGCCGAACAGAGCTAGTTTCATTGAATTTGTCACAGAATCGAACAACACCCACAAGATTCAAGGATACTGCATTGACGTGTTTATTGAGGCACGGAAGTTGGTCCCTTATGAAGTTCCATATATATTCGTGCCTTTTGGAGATGGCCATGCCAATCCCAGTTACTCCGACCTTGTGAAGAATGTTGCAAATAATGTGTTCGATGCTGCCGTTGGAGATATAGCAATCGTGACCAACCGAACAAAGATTGTGGATTTTTCACAGCCTTTTATTGCAACTGGTCTCGTTATTGTGGCCCCGATTGAAAATTCAAAATCTAGCGCTTGGGTTTTCCTCAAACCCTTTACAGTGGAGATGTGGTGCGTCACAGTAGCATCATTTGTCATGGTTGGAATCGTTATATGGATTCTTGAGCGTCGAGTTAATATTGATTTCCAGGGCCCTCCAAAAACGCAGATTGTGACAGTTTTATTGTTCATCTTCTCAACTCTTTTTAAGACAAATCAGGAAGTTATGGTTAGCCCACTGGCAAGGATGGTTATGGTGATCTGGCTTTTCTTATTGATGGTTATCACTTCAAGCTACACGGCAAGTTTGACTTCGATCCTTACAGTTCAGCAGCTTTCGTCTCCTATCACCGGAATCGATAGCTTAATTGCAAGTAATTGGCCTATTGGATACCAGGTTGGGTCCTTTACCTACAGCTATCTGACCGAGAACCTATACATACATGGATCAAGACTGGTTTCTCTAGGCTCTCCAGAAGAGTATGAAAAAGCTCTTCGACTAGGGCCTCATAATGGAGGAGTGGCCGCCATTATAGACGAGCTTCCATATGTGGAGTTGTTTTTGTCGAAAACTCCCGATTTTGGGATTATTGGGCAGACATTTACCAAAAGCGGCTGGGGTTTTGCCTTCAAGAGAGACTCTCCTCTTGCAATTGACATTTCCACTGCAATTTTGAAACTTTCCGAGAATGGAGAGCTTCAAAAAATACGCGAGAAGTGGTTCTGTCAAATGGGTTGCCCCGGCGATAGAATACGTACATCCTCACCAAACCAGCTTCCCTTAATGAGCTTCTGGGGTTTATATCTCTTCTGTGGTATACTTTGTCTAGCTGCGCTCCTCTTATTTCTAGTGAGAATGGTCTTGCAATTCATTCGATACAAACGAAATCACATCGACCCTTCATCTCCTCCCTCGACTGCATCATTAACTACCCGTTGGTCTCAGTTAATTCATCACTTTGTCGACTTTGTTGACGAAAGGGAAGAGGCCATCAAGAACATCTTCAGACAGTACGACCCTCCTGCAATTCCGGTATGTAGTTCTTCCAATGCATGA 2742 42.74 MKNFVVGLFILMWVVFVDSILCESLAVVNVGAVFTFDSVIGRAAKTAMEAAVSDINADPTILNGTKLNLIMEDVDCNVFLGSIRAFQVLEKEVVAIVGPQSSSIAHMISQIANGFQVPLVSYAATDPTLSALQFPYFVRTAPSDSYQMAAMAELIDFYGWKEVIAIFEDNNYGRNGISALDNELQKKMAKVSHKLPMHPLFNHSEIAHFLNNSKLLGPRVYVVHVSPDPRLRIFRIADKLQMMTNNYVWLATDWLLTTLDSLSPTDLSSLDSLQGIVGLRQHFPASNQKIAFLSRLSKQEGSVSSAHYAYALIAYDTIWLVARSIDKFLKTNGNLTFSLTDKLQNMNASRIHLGDLKIFSGGDLLLSILLKTNFTGLTGQVRFSSDRNRVGGSYGVINIDRGTAREVGFWSNASGFTVLPPETLNEKQISYSRLNQELGNVTWPGGTTNRPQGWVIADNAKPLKIGVPNRASFIEFVTESNNTHKIQGYCIDVFIEARKLVPYEVPYIFVPFGDGHANPSYSDLVKNVANNVFDAAVGDIAIVTNRTKIVDFSQPFIATGLVIVAPIENSKSSAWVFLKPFTVEMWCVTVASFVMVGIVIWILERRVNIDFQGPPKTQIVTVLLFIFSTLFKTNQEVMVSPLARMVMVIWLFLLMVITSSYTASLTSILTVQQLSSPITGIDSLIASNWPIGYQVGSFTYSYLTENLYIHGSRLVSLGSPEEYEKALRLGPHNGGVAAIIDELPYVELFLSKTPDFGIIGQTFTKSGWGFAFKRDSPLAIDISTAILKLSENGELQKIREKWFCQMGCPGDRIRTSSPNQLPLMSFWGLYLFCGILCLAALLLFLVRMVLQFIRYKRNHIDPSSPPSTASLTTRWSQLIHHFVDFVDEREEAIKNIFRQYDPPAIPVCSSSNA 913
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5826755 5830666 - Bda023611.1 Bda06g00363 7945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00363 913 PIRSF IGluLR_plant 1 902 IPR017103 -
Bda06g00363 913 Gene3D - 752 810 - -
Bda06g00363 913 Pfam Bacterial extracellular solute-binding proteins, family 3 479 803 IPR001638 -
Bda06g00363 913 Gene3D - 574 705 - -
Bda06g00363 913 SMART GluR_14 464 805 IPR001320 GO:0015276|GO:0016020
Bda06g00363 913 SUPERFAMILY Periplasmic binding protein-like II 441 804 - -
Bda06g00363 913 Gene3D - 46 391 - -
Bda06g00363 913 Pfam Ligand-gated ion channel 804 835 IPR001320 GO:0015276|GO:0016020
Bda06g00363 913 CDD PBP1_GABAb_receptor_plant 29 418 IPR044440 -
Bda06g00363 913 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 41 57 - -
Bda06g00363 913 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 101 129 - -
Bda06g00363 913 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 314 326 - -
Bda06g00363 913 Gene3D - 455 573 - -
Bda06g00363 913 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 10 901 - -
Bda06g00363 913 CDD GluR_Plant 461 803 - -
Bda06g00363 913 PANTHER GLUTAMATE RECEPTOR 3.7 10 901 - -
Bda06g00363 913 Gene3D - 143 416 - -
Bda06g00363 913 Pfam Receptor family ligand binding region 45 400 IPR001828 -
Bda06g00363 913 SUPERFAMILY Periplasmic binding protein-like I 27 454 IPR028082 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00363 Bda13g00619 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00363 Bda-Chr6:5826755 Bda11g00980 Bda-Chr11:9538303 0 dispersed
Bda06g00362 Bda-Chr6:5820368 Bda06g00363 Bda-Chr6:5826755 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00363 K05387 - cit:102611344 1190.25