Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00373 ATGGCCAAAGGAAGTGGACTCTCCATTGATTCAGATCCATTTGGGTTCTTCTTTCAGAAGCCTATGGTTCTAAACTCTTTTCCAGAAGCCGGATTGGAAGATGCACCTTCCAGCTCTTCTCCTCCTCCTTCCTCCATATATGGGGGTTTCAAGTTTCCTGTTAATCTTAACTCATCTTCCCATGATCTCACTGAAACTCCTCCGCCCTCTGATGATCCTGAAGGGACGATTATCAGTGAGATGGACTTCTTCTCCGATGAGAAAATTCAGAAAGCCCGAGATTCATCCGTTGACGATGGAGGCTATCCAAATCCTAGAGAGTTGACTGTGAACGTAAACTTTTTTCTAAATTATTTTATAATTTTATCATCTTTCTTTCTTCTGGTTTTCATATTTGAATCTGAATTGTCCCTTTTACAGACCGGTCTTAATCTTCTAACCACTAACACAACCACCAACCAGTCAATTGTGGATGATAGAATCTCATCAAACTCAGATAATAAAAGAGCTAAAAACGAGTTAGCTGTTCTTCAAGCAGAGGTTGAGCGAATGAACACAGAGAATCAACGGTTAAGAGATATGCTAAATCAGGGTACGACCAATTACCAAGTTTTACAATTACACCTGGTGAGTTTGCTGCAAAATCAGAAAGCTGGTGAAGCTTTTGTTAATGGCGGACGAGTGGGGCCCAGACAGTTTATGGATCTTGGGTTGGCTTCTAATTCTGGTGAGCCTACGTTATCTTTCTCGGAAGAGAGAGGAAGAAGCCATGACAGGCCTGCTTCTCCAGGAAATCACACAGAAGTTGGAGCCAAGGAAGAAGAAAAGAAAAAACCACCTGGAAGGAAAACTGGGAGAGAAGATAGCCAGGAAGATGAAGCATCTAATGGAGTTTCGAACAAATTTCCGAGATTTGAATCTACGAGTCAAGTTGATCAAACTGCGGCCACCATGAGAAAGGCTCGAGTTTCAGTTAGAGCTCGATCTGAAGCTCCAATGATCAATGATGGTTGTCAATGGCGGAAATATGGTCAGAAAATGGCAAAGGGAAATCCATGTCCCAGAGCTTACTATCGATGTACTATGGCTTCCAGTTGTCCAGTTCGCAAACAAGTTCAAAGGTGTGCCGACGATCAAACAATTCTAACGACAACATACGAAGGAAATCACAATCATCCTTTACCAGTTGCAGCTATGGCTATGGCGTCAACGACTGCATCGGCAGCTCGAATGCTTCTATCAGGCGCAGTGCCTAGCTCCGACGGGCTGATGAACCCTAATTTCCTTACCAGACCCACCCCTTTCCTCCCTTGTTCCTCTTCAATGGCTACCATTTCTGCCTCAGCTCCATTTCCCACTGTCACATTAGACCTAACCCAGAAACCTCCAGATAACTTCAGCAACATTCCACCTCAAAATTTCATCAATCCACGACCCACTTTGATCCCTCAATTTTTGGGGCAATCTTTAAATAACCAATCCAAATTCTCCGGCCTTCAAATCTCGCAAGAAATGTACACTTCTCAAATGGGTCGCCAACTACAGCAACTACTACCTTCGTTTTTTCAGCAAAATGGCATGCATGGTTCAATGGGTGAGAGCTTGAGTACAGCAACAGCCGCCATTGCTTCAGATCCAAAGTTTACCGCAGCTTTGGCTGCCGCTATCTCTTCCATTATTGGTAACAGCAATGGCAACATGAACATCGCTGCTGGCAAGTGCAACAGTAATAGCAACAACTAG 1743 43.83 MAKGSGLSIDSDPFGFFFQKPMVLNSFPEAGLEDAPSSSSPPPSSIYGGFKFPVNLNSSSHDLTETPPPSDDPEGTIISEMDFFSDEKIQKARDSSVDDGGYPNPRELTVNVNFFLNYFIILSSFFLLVFIFESELSLLQTGLNLLTTNTTTNQSIVDDRISSNSDNKRAKNELAVLQAEVERMNTENQRLRDMLNQGTTNYQVLQLHLVSLLQNQKAGEAFVNGGRVGPRQFMDLGLASNSGEPTLSFSEERGRSHDRPASPGNHTEVGAKEEEKKKPPGRKTGREDSQEDEASNGVSNKFPRFESTSQVDQTAATMRKARVSVRARSEAPMINDGCQWRKYGQKMAKGNPCPRAYYRCTMASSCPVRKQVQRCADDQTILTTTYEGNHNHPLPVAAMAMASTTASAARMLLSGAVPSSDGLMNPNFLTRPTPFLPCSSSMATISASAPFPTVTLDLTQKPPDNFSNIPPQNFINPRPTLIPQFLGQSLNNQSKFSGLQISQEMYTSQMGRQLQQLLPSFFQQNGMHGSMGESLSTATAAIASDPKFTAALAAAISSIIGNSNGNMNIAAGKCNSNSNN 580
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5944010 5946093 + Bda023619.1 Bda06g00373 7955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00373 580 MobiDBLite consensus disorder prediction 295 317 - -
Bda06g00373 580 MobiDBLite consensus disorder prediction 37 51 - -
Bda06g00373 580 MobiDBLite consensus disorder prediction 29 51 - -
Bda06g00373 580 SMART WRKY_cls 334 394 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda06g00373 580 Coils Coil 167 197 - -
Bda06g00373 580 PANTHER OS05G0567200 PROTEIN 71 578 - -
Bda06g00373 580 ProSiteProfiles WRKY domain profile. 329 395 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda06g00373 580 Gene3D WRKY domain 319 396 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda06g00373 580 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 71 578 IPR044810 GO:0003700
Bda06g00373 580 MobiDBLite consensus disorder prediction 250 294 - -
Bda06g00373 580 SUPERFAMILY WRKY DNA-binding domain 327 395 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda06g00373 580 MobiDBLite consensus disorder prediction 58 77 - -
Bda06g00373 580 MobiDBLite consensus disorder prediction 234 320 - -
Bda06g00373 580 Pfam WRKY DNA -binding domain 335 393 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00373 Bda15g00953 CCT
Bda06g00373 Bda15g00953 ECH
Bda06g00373 Bda13g00576 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00373 Bda-Chr6:5944010 Bda15g00953 Bda-Chr15:17560389 5.31E-165 dispersed
Bda13g00576 Bda-Chr13:6742948 Bda06g00373 Bda-Chr6:5944010 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15999 PF03106 WRKY 3.10E-24 CL0274 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00373 - - qsu:112033147 529.25