Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00378 ATGAAACCTCGAATTTGGTGGGTGTTCTTGCTCTTAATCTCTTCGTTTTTGAGAGCTGAATCCGACTGTAATCAACGCTGTGATTTAGCTTTAGCTTCTTACTTCGTATGGCCAGATTCAAACATCTCATTCATATCGCAAGTGATGAACGCCTCCATCGATTCTATCTTGGAATTCAACAAAGATTCTATTGCGAACAAAGATAGTGTTACAAGCGGAACTAGGGTGAATGTTCCATTTCCATGCGGTTGCATCGAGAATAGTTTTCTAGGGCATACGTTTACTTATGCGATTAAGAGTGGAGATACCTATGATGATATTTCTGGTACCTACTACTCGAACTTGACGACGATCCAGATGTTGCAGAGATTCAATAGCTATGATCCTAATAGTCTTGTTATTGGTTCTATATTGAACGTGGTGGTGGATTGCTCCTGTGGAAATTCTTCAGTTTCAGAGGATTTCGGATTGTTCATTACTTATCCTCTTCGCGTGGATGATAGCTTGAATAAATTATCGGCTCAAACGAATATTAGCTCTGATCTTCTTCAAGCGTATAACCCAGGAGCCAATTTCAGCGCAGGGAGTGGATTGGTTTTTATTCCAGGAAAAGCAGGACTTGGAGCTGGAGCCATTGCAGGTATAGTTATAGCAGTAGTGGCAGTGTTGGTATTGTTAGCTGCTTGCTTCTACTTTGGATTTTACCGAAGGAAGAAGATTCGAGATGCAAGATTGCTAAATGTATCTCAAGAGCTAAGTCCTCGAGGTAGCTGTGATGAATATAAATCGACCGAAGAAAGTGCTTCCAGGAGTGGGACTACTCCTCGATTTACAGGCATTACAGTGGATAAATCCGTTGAGTTCTCCTACGAAGAACTTGCCGGGGCTACTAGTGATTTCAGTTTAGCTAATAAGATCGGTGAAGGTGGTTTTGGATCTGTTTACTATGCAGAATTGAGAGGCGAGAAAGCAGCAATCAAGAAGATGGATATGCAGGCGACGAAAGAATTCCTTGCGGAGCTACAAGTTCTAACACGTGTTCATCATTTGAACTTGGTGCGGCTCATTGGATATTGCGTCGAGGGTTCTCTTTTTCTAGTTTATGAATTCATCGAAAATGGGAACTTAAGCCAGCATTTGCGAGGCTCGGGGAGAGATCCATTGCCTTGGTCTAGGCGGGTGCAAATCGCCCTCGATTCGGCTAGAGGGCTTGAATATATTCATGAACATACAGTTCCGGTTTATATCCATCGCGATATCAAGTCAGCAAATATATTGATCGACAAGAACTTCCGTGGAAAGGTGCTATACGAAATTCTGTTCAAATCCCTCTTTAAACACACGCTAATTAAATACGAAATATGGCTGCAGGTTGCAGATTTTGGATTGACTAAACTGACTGAAGTTGGGAATACAATCCAGACACGACTCGTGGGCACATTTGGATACATGCCTCCTGAGTACGCTCAATATGGCGATGTTTCTCCGAAAATAGACGTTTATGCTTTCGGGGTTGTTCTGTATGAACTTATTTCTGCAAAGGAAGCTGTTGTCAAAACAAATCGAGCAAGCGCCATTAACGAATCCAAGGGCCTGGTGGCCTTGTTTGAGGATGTGCTTAATGAGCCCGATCCTAGAGAAAGTCTCCGGAAAGTCGTAGATCCAAGACTCGAAGATACCTATCCGATCGAATCCGTCCTCAAGACGGCTCAGCTGGCTAAAGCATGCACGCATGAAAACCCACAATTACGGCCGAGCATGAGATCGATCGTGGTTGCGTTAATGACTCTTTCGTCCTCAACGGAAGACTGGGATGTTGACTCATTCTATGAAAATCAAGCTCTTGTCAATCTCATGTCTGGAAGG 1866 43.19 MKPRIWWVFLLLISSFLRAESDCNQRCDLALASYFVWPDSNISFISQVMNASIDSILEFNKDSIANKDSVTSGTRVNVPFPCGCIENSFLGHTFTYAIKSGDTYDDISGTYYSNLTTIQMLQRFNSYDPNSLVIGSILNVVVDCSCGNSSVSEDFGLFITYPLRVDDSLNKLSAQTNISSDLLQAYNPGANFSAGSGLVFIPGKAGLGAGAIAGIVIAVVAVLVLLAACFYFGFYRRKKIRDARLLNVSQELSPRGSCDEYKSTEESASRSGTTPRFTGITVDKSVEFSYEELAGATSDFSLANKIGEGGFGSVYYAELRGEKAAIKKMDMQATKEFLAELQVLTRVHHLNLVRLIGYCVEGSLFLVYEFIENGNLSQHLRGSGRDPLPWSRRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFRGKVLYEILFKSLFKHTLIKYEIWLQVADFGLTKLTEVGNTIQTRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLYELISAKEAVVKTNRASAINESKGLVALFEDVLNEPDPRESLRKVVDPRLEDTYPIESVLKTAQLAKACTHENPQLRPSMRSIVVALMTLSSSTEDWDVDSFYENQALVNLMSGR 622
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5968442 5972111 - Bda033754 Bda06g00378 7960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00378 622 Gene3D Phosphorylase Kinase; domain 1 285 370 - -
Bda06g00378 622 Pfam LysM domain 96 140 IPR018392 -
Bda06g00378 622 Gene3D LysM domain 94 140 IPR036779 -
Bda06g00378 622 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 8 435 IPR044812 GO:0019199|GO:0045087
Bda06g00378 622 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1 8 435 - -
Bda06g00378 622 SUPERFAMILY Protein kinase-like (PK-like) 279 594 IPR011009 -
Bda06g00378 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Bda06g00378 622 Gene3D Transferase(Phosphotransferase) domain 1 371 616 - -
Bda06g00378 622 Pfam Protein kinase domain 302 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g00378 622 CDD LysM 95 140 IPR018392 -
Bda06g00378 622 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 449 622 IPR044812 GO:0019199|GO:0045087
Bda06g00378 622 ProSitePatterns Protein kinases ATP-binding region signature. 306 328 IPR017441 GO:0005524
Bda06g00378 622 ProSiteProfiles Protein kinase domain profile. 300 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g00378 622 SMART serkin_6 300 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g00378 622 MobiDBLite consensus disorder prediction 254 274 - -
Bda06g00378 622 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1 449 622 - -
Bda06g00378 622 SMART LysM_2 95 141 IPR018392 -
Bda06g00378 622 SMART LysM_2 33 79 IPR018392 -
Bda06g00378 622 ProSiteProfiles LysM domain profile. 94 140 IPR018392 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00378 Bda13g00584 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00378 Bda-Chr6:5968442 Bda13g00308 Bda-Chr13:3922451 3.60E-64 dispersed
Bda10g00153 Bda-Chr10:4498415 Bda06g00378 Bda-Chr6:5968442 8.50E-08 dispersed
Bda04g00317 Bda-Chr4:47007325 Bda06g00378 Bda-Chr6:5968442 1.27E-56 transposed
Bda11g00607 Bda-Chr11:6171112 Bda06g00378 Bda-Chr6:5968442 1.29E-56 transposed
Bda13g00584 Bda-Chr13:6873767 Bda06g00378 Bda-Chr6:5968442 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69666 PF00069 Pkinase 2.50E-41 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00378 - K13429 csv:101203576 805.823