Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda06g00397 | ATGCCAAAGAACAAAGGGAAGGGAGGAAAGAACAGGAAGAGGGGAAAGAACGAAGCGGACGATGAGAAGCGTGAGCTTGTGTTCAAGGAAGACGGACAAGAATATGCCCAAGTTCTCCGAATGTTGGGTAATGGCAGATGCGAAGCAATGTGCATAGATGGGACAAAACGACTATGCCACATCCGGGGAAAGATGCACAAGAAGGTGTGGATTGCAGCCGGTGATATCATTCTCGTCGGCCTTCGTGATTATCAGGACGATAAAGCTGATGTAATCCTCAAATACATGCCTGATGAGGCTAAGCTTTTGAAGGCTTATGGGGAGCTCCCTGATAACACTCGTCTCAACGAGGGCATTGCTGGTGGGATCGACGATGAGGATGAGGCTGGAGGCGAAGATTACATCGAGTTTGAAGATGAAGATATCGATAAGATCTAG | 438 | 47.95 | MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEAKLLKAYGELPDNTRLNEGIAGGIDDEDEAGGEDYIEFEDEDIDKI | 145 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 6177240 | 6177677 | + | Bda023643.1 | Bda06g00397 | 7979 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda06g00397 | 145 | SMART | eIF1neu4 | 28 | 110 | IPR001253 | GO:0003743|GO:0006413 | |
Bda06g00397 | 145 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 1A-LIKE | 1 | 145 | - | - | |
Bda06g00397 | 145 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Bda06g00397 | 145 | TIGRFAM | eIF-1A: translation initiation factor eIF-1A | 14 | 110 | IPR001253 | GO:0003743|GO:0006413 | |
Bda06g00397 | 145 | CDD | S1_IF1A | 33 | 109 | IPR001253 | GO:0003743|GO:0006413 | |
Bda06g00397 | 145 | Pfam | Translation initiation factor 1A / IF-1 | 32 | 93 | IPR006196 | GO:0003723|GO:0003743|GO:0006413 | |
Bda06g00397 | 145 | ProSitePatterns | Eukaryotic initiation factor 1A signature. | 41 | 63 | IPR018104 | GO:0003743|GO:0006413 | |
Bda06g00397 | 145 | Gene3D | - | 2 | 145 | IPR012340 | - | |
Bda06g00397 | 145 | Hamap | Translation initiation factor 1A [eif1a]. | 16 | 110 | IPR001253 | GO:0003743|GO:0006413 | |
Bda06g00397 | 145 | SUPERFAMILY | Nucleic acid-binding proteins | 2 | 144 | IPR012340 | - | |
Bda06g00397 | 145 | ProSiteProfiles | S1 domain IF1 type profile. | 22 | 96 | IPR006196 | GO:0003723|GO:0003743|GO:0006413 | |
Bda06g00397 | 145 | PANTHER | EIF-1A | 1 | 145 | IPR001253 | GO:0003743|GO:0006413 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda06g00397 | Bda-Chr6:6177240 | Bda06g00400 | Bda-Chr6:6212183 | 4.05E-102 | dispersed | |
Bda06g00397 | Bda-Chr6:6177240 | Bda06g00399 | Bda-Chr6:6183338 | 1.35E-101 | proximal | |
Bda15g00969 | Bda-Chr15:17870565 | Bda06g00397 | Bda-Chr6:6177240 | 1.84E-97 | transposed | |
Bda13g00601 | Bda-Chr13:7022173 | Bda06g00397 | Bda-Chr6:6177240 | 5.91E-69 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda06g00397 | K03236 | - | fve:101293411 | 236.498 |