Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00409 ATGTCAAACAGACTGTATTATCAGCCAACGCAAGAAGTAGATTCCTATTGTTTGCCTCAGCTTCAAAGTCTGCCCTCGGGTCCTGGCAAAAAGAGGCCCTACTTCACTAAGCCAAATTTCGACACTAGTTACTGCACTTTGGAATCATCTCCTGCATTTCCATCAACTATTTCTTTCTCCTCCAATGGAAGCCAAAAGTCACTCCGAGACTCATACTCACATTCGACCGATAAGCGTTATTCTCCAGACAACTCCTATGGCTCTCCGATCAGCAGCTCCTGCATAACCGACGATGTTAATGAACTGAAGCACAAATTACTGGTGTTGGAAAATGTAATGATGGGCCCTGACTTTGATGTTTTTGACAATCCCGATCCTGAAAGCTGGGGACAAATTATGGACTCAATTTCTCGAGGTGATCTAAGAAAGGTTCTCATCTCTTGTGCCAAAGCCGTGTCGGATAATAACTCGATAGTGGCTCAATGGTTAGTGGATGAACTTCGGAAGATGGTATCTGTTTCTGGCGAACCAATGCAAAGGCTGGGTGCATATATGTTGGAAGGGCTTGTTGCTCGACTATCGTCATCAGGTAGTTGCATTTACAAAGCTTTGAGGGGTAAAGAACCAGCCAGTAGTGAGCTTCTCTCTTACATGCATACTCTCTACGAGGCCTGTCCCTACTTCAAATTTGGATACATGTCTGCAAATGGTGCAATTGCAGAAGCCATGAAAGATGAAGACAGAGTTCACATTATAGATTTTCAGATAGCTCAAGGAAGTCAGTGGATCACGCTCATTCAAGCCTTTGCAGCTCGCCCGGGTGGACCTCCCCACATAAAAATAACGGCAGGGATTGATGATTCCATGTCAGCTTACGCACGAGGAGGAGGACACCATATTGTTGGAAAACGCCTTTCGAAGCTAGCGAAGACATTCAAAGTCCCGTTTGAGTTTTGTGCAGCAGCCGTGTCAGGTCGAGAGGTTCAGCCCAAAAATCTCAATGTTCAACCGGGCGAGGCTGTTGCTGTGAATTTTGCTTTTATCCTTCACCACATGCCTGATGAGAGTGTAAGCACGGAAAATCACAGAGACAAGCTCTTAAGGCTGGCTAAGAGCCTATCTCCAAAAGTAGTGACACTTGTCGAGCAAGAATCTAACACAAATACCGCAACTTTCTGTTCTCGTTTCAGTGAGGCTCTCGATTACTATAATGCTATGTTTGAGTCAATCGATGCTACTCTTCCAAGGGAGCACAAGGACAGAATCAACATAGAGCAACACTGCCTAGCCCAAGAAGTCGTTAATACAATAGCTTGTGAAGGGCCGGAGAGAGTCGAAAGACATGAGCTTCTCGGGAAATGGAGGTCCCGTTTTAGGATGGCGGGATTTTCCCCATATTCTTTGAGCTCTCTGGTCAATTCAACCATTAAAACACTGTTAGAGAACTACTGTAATAGATATAGACTTGAGGAGAGAGAAGGGGCTCTCTTTCTTGGTTGGATGGACAGAGATTTGGTTGCTTCTTCTGCATGGAAATGA 1539 45.03 MSNRLYYQPTQEVDSYCLPQLQSLPSGPGKKRPYFTKPNFDTSYCTLESSPAFPSTISFSSNGSQKSLRDSYSHSTDKRYSPDNSYGSPISSSCITDDVNELKHKLLVLENVMMGPDFDVFDNPDPESWGQIMDSISRGDLRKVLISCAKAVSDNNSIVAQWLVDELRKMVSVSGEPMQRLGAYMLEGLVARLSSSGSCIYKALRGKEPASSELLSYMHTLYEACPYFKFGYMSANGAIAEAMKDEDRVHIIDFQIAQGSQWITLIQAFAARPGGPPHIKITAGIDDSMSAYARGGGHHIVGKRLSKLAKTFKVPFEFCAAAVSGREVQPKNLNVQPGEAVAVNFAFILHHMPDESVSTENHRDKLLRLAKSLSPKVVTLVEQESNTNTATFCSRFSEALDYYNAMFESIDATLPREHKDRINIEQHCLAQEVVNTIACEGPERVERHELLGKWRSRFRMAGFSPYSLSSLVNSTIKTLLENYCNRYRLEEREGALFLGWMDRDLVASSAWK 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6245748 6247435 - Bda023655.1 Bda06g00409 7991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00409 512 MobiDBLite consensus disorder prediction 58 87 - -
Bda06g00409 512 Pfam GRAS domain family 141 512 IPR005202 -
Bda06g00409 512 PANTHER SCARECROW-LIKE TRANSCRIPTION FACTOR PAT1 10 512 - -
Bda06g00409 512 ProSiteProfiles GRAS family profile. 132 512 IPR005202 -
Bda06g00409 512 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 512 IPR005202 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00409 Bda13g00599 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00689 Bda-Chr1:34048835 Bda06g00409 Bda-Chr6:6245748 3.99E-143 dispersed
Bda06g00409 Bda-Chr6:6245748 Bda09g01581 Bda-Chr9:47274577 0 dispersed
Bda06g00693 Bda-Chr6:9554494 Bda06g00409 Bda-Chr6:6245748 3.80E-69 dispersed
Bda14g00135 Bda-Chr14:943576 Bda06g00409 Bda-Chr6:6245748 4.27E-71 dispersed
Bda14g01018 Bda-Chr14:8556882 Bda06g00409 Bda-Chr6:6245748 3.02E-14 dispersed
Bda15g00713 Bda-Chr15:10535709 Bda06g00409 Bda-Chr6:6245748 2.99E-67 dispersed
Bda06g00409 Bda-Chr6:6245748 Bda13g00599 Bda-Chr13:6981834 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16003 PF03514 GRAS 1.10E-133 CL0063 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00409 - - tcc:18612432 764.222