Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00422 ATGGCTACCTCCGCCGTCCAGCAGTCGACTTTCGCCGGCCAGACCGCCCTCAAGCAGTCCAATGAGCTCGTCCGCAAGGTCGGTGTCTCTAATGGCGGCCGCATTGCTATGCGCCGAACTGTGAAGAGTGCTCCTCAAAGTATCTGGTATGGTCCAGACCGTCCGAAATATTTGGGACCATTCTCCGAGCAAACCCCGTCGTACCTTACCGGCGAGTTCCCAGGAGACTACGGCTGGGACACCGCCGGATTATCGGCTGATCCCGAGACGTTCGCCAAGAACAGGGAGCTGGAAGTGATCCACAGCCGGTGGGCCATGCTCGGGGCTCTCGGATGTGTCTTCCCAGAGATTCTCTCAAAGAACGGCGTGAAGTTCGGCGAGGCAGTGTGGTTCAAAGCCGGATCTCAGATCTTCTCCGAAGGTGGCTTGGACTATCTCGGCAACCCTAATTTGATTCACGCGCAGAGCATCCTTGCCATCTGGGCCAGTCAAGTTGTCCTAATGGGGCTAATCGAAGGTTACAGAGTCGGAGGAGGACCTCTCGGCGAGGGACTCGACCCAATTTACCCAGGTGGATCATTCGACCCGCTTGGGTTGGCCGATGACCCCGAAGCCTTCGCAGAGTTGAAGGTGAAAGAGCTCAAAAACGGTAGGTTGGCTATGTTCTCCATGTTCGGATTCTTCGTTCAGGCAATCGTCACCGGAAAAGGCCCGATCGAGAACCTCTCCGACCACCTCGCCGATCCCGTGGCTAACAACGCCTGGGCTTACGCCACTAACTTCGTCCCCGGCAAATAA 798 56.89 MATSAVQQSTFAGQTALKQSNELVRKVGVSNGGRIAMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGPLGEGLDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWAYATNFVPGK 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6327486 6328382 + Bda023668.1 Bda06g00422 8004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00422 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 265 IPR001344 GO:0009765|GO:0016020
Bda06g00422 265 Pfam Chlorophyll A-B binding protein 66 231 IPR022796 -
Bda06g00422 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Bda06g00422 265 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 2.1, CHLOROPLASTIC-RELATED 1 265 - -
Bda06g00422 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00422 Bda15g00911 CCT
Bda06g00422 Bda15g00911 ECH
Bda06g00422 Bda13g00597 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00422 Bda-Chr6:6327486 Bda15g00911 Bda-Chr15:15172748 0 dispersed
Bda07g00273 Bda-Chr7:3895327 Bda06g00422 Bda-Chr6:6327486 2.49E-125 transposed
Bda09g00367 Bda-Chr9:4684261 Bda06g00422 Bda-Chr6:6327486 6.63E-126 transposed
Bda13g00597 Bda-Chr13:6963183 Bda06g00422 Bda-Chr6:6327486 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00422 K08913 - pop:7455996 522.316