Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00433 ATGGGTCTCTCGAGCCTTCCGACTCCATCCGAGGGAATACTTTCTGTATTAGTACAAACTGCATTATCCATTTCCTTCTTCAAAAGCATAGTTGGATCGATTCTCCATGTCATCGGCATTGGCATCTTGTCATCATCCTCTTCACATTTGCCAGCAGACTCTGTCGAAATTTCTGCAGACTCCCTCGATTTTCATCTATGTTATTCCGAGACATACGCAGAGGAATTCCGAAGGAGGGTGCCCACCATTCGATTCGACAAAGCATGCAACAGTCGGCAGCCTGAGCTAAACTGCACAGTTTGCTTGACTCAATTTGAGCCTGAATCAGAGATTAACCTGTTATCTTGTGGCCATATTTTTCACAAAGTGTGCTTGGAGAAGTGGCTAGACTACTGGAATGTCACATGCCCAATGTGTAGGACTCCATTAATGCCAGAAGAAGAGAGAGTTAGGTGA 456 44.96 MGLSSLPTPSEGILSVLVQTALSISFFKSIVGSILHVIGIGILSSSSSHLPADSVEISADSLDFHLCYSETYAEEFRRRVPTIRFDKACNSRQPELNCTVCLTQFEPESEINLLSCGHIFHKVCLEKWLDYWNVTCPMCRTPLMPEEERVR 151
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6408731 6409186 - Bda023679.1 Bda06g00433 8015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00433 151 ProSiteProfiles Zinc finger RING-type profile. 98 140 IPR001841 -
Bda06g00433 151 PANTHER E3 UBIQUITIN-PROTEIN LIGASE XERICO-RELATED 1 148 - -
Bda06g00433 151 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 145 IPR013083 -
Bda06g00433 151 SMART ring_2 98 139 IPR001841 -
Bda06g00433 151 Pfam Ring finger domain 97 140 IPR001841 -
Bda06g00433 151 PANTHER - 1 148 IPR044249 -
Bda06g00433 151 SUPERFAMILY RING/U-box 93 145 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00433 Bda14g00663 CCT
Bda06g00433 Bda13g00587 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00433 Bda-Chr6:6408731 Bda08g00140 Bda-Chr8:1319207 1.92E-17 dispersed
Bda13g00587 Bda-Chr13:6910938 Bda06g00433 Bda-Chr6:6408731 6.64E-78 wgd
Bda14g00663 Bda-Chr14:4991286 Bda06g00433 Bda-Chr6:6408731 1.52E-48 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00433 K16285 - tcc:18612514 188.348