Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda06g00433 | ATGGGTCTCTCGAGCCTTCCGACTCCATCCGAGGGAATACTTTCTGTATTAGTACAAACTGCATTATCCATTTCCTTCTTCAAAAGCATAGTTGGATCGATTCTCCATGTCATCGGCATTGGCATCTTGTCATCATCCTCTTCACATTTGCCAGCAGACTCTGTCGAAATTTCTGCAGACTCCCTCGATTTTCATCTATGTTATTCCGAGACATACGCAGAGGAATTCCGAAGGAGGGTGCCCACCATTCGATTCGACAAAGCATGCAACAGTCGGCAGCCTGAGCTAAACTGCACAGTTTGCTTGACTCAATTTGAGCCTGAATCAGAGATTAACCTGTTATCTTGTGGCCATATTTTTCACAAAGTGTGCTTGGAGAAGTGGCTAGACTACTGGAATGTCACATGCCCAATGTGTAGGACTCCATTAATGCCAGAAGAAGAGAGAGTTAGGTGA | 456 | 44.96 | MGLSSLPTPSEGILSVLVQTALSISFFKSIVGSILHVIGIGILSSSSSHLPADSVEISADSLDFHLCYSETYAEEFRRRVPTIRFDKACNSRQPELNCTVCLTQFEPESEINLLSCGHIFHKVCLEKWLDYWNVTCPMCRTPLMPEEERVR | 151 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 6408731 | 6409186 | - | Bda023679.1 | Bda06g00433 | 8015 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda06g00433 | 151 | ProSiteProfiles | Zinc finger RING-type profile. | 98 | 140 | IPR001841 | - | |
Bda06g00433 | 151 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE XERICO-RELATED | 1 | 148 | - | - | |
Bda06g00433 | 151 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 64 | 145 | IPR013083 | - | |
Bda06g00433 | 151 | SMART | ring_2 | 98 | 139 | IPR001841 | - | |
Bda06g00433 | 151 | Pfam | Ring finger domain | 97 | 140 | IPR001841 | - | |
Bda06g00433 | 151 | PANTHER | - | 1 | 148 | IPR044249 | - | |
Bda06g00433 | 151 | SUPERFAMILY | RING/U-box | 93 | 145 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda06g00433 | Bda14g00663 | CCT | |
Bda06g00433 | Bda13g00587 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda06g00433 | Bda-Chr6:6408731 | Bda08g00140 | Bda-Chr8:1319207 | 1.92E-17 | dispersed | |
Bda13g00587 | Bda-Chr13:6910938 | Bda06g00433 | Bda-Chr6:6408731 | 6.64E-78 | wgd | |
Bda14g00663 | Bda-Chr14:4991286 | Bda06g00433 | Bda-Chr6:6408731 | 1.52E-48 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda06g00433 | K16285 | - | tcc:18612514 | 188.348 |