Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda06g00455 | ATGGAGTCACAATCAGATCTTCAGAAAGTAGCACTAGAATTGACGGATGCTTTGTCTACGCTTGAGCATACATTCGTCGTCTCCGATGCTACAAAACCAGATTGCCCGATAGTTTACGCCAGCAGTGGGTTTTTCACCATGACTGGCTATTCCTCAGACGAAATCATTGGAAGGAACTGTCGATTCCTTCAAGGAGCAGACACAGACCAAAATGAAGTTGACAAAATTCGAAATGCAGTGAGGAATGGAAAAAGCTACTGCGGCCGGCTCTTGAACTACAAGAAGAACGGTTCTCCTTTCTGGAATCTTCTCACTGTCACTCCAATTAAAGATGAAAATGGCAAAGTCATCAAATTCATCGGAATGCAGGTTGAGGTCAGCAAATACACAGAAGGCGTGATCGACAAGGCATTACGTCCAAATGGATTGCCCCAATCATTAATCCGCTATGATGCTCGACAGAAAGAGAAGGCTCTGAACTCAATTGAAGAAGTTCTCCAGACTGTTAAACACCCTCAATCTCTCACTCGAACTACCAGCCACAATTCTGTCTTCAAACGCCAAGAGTCTGCACAATCCAAATCTGATTATGCCGAAGCTATCACTACGCCAGGGAGACAAACTTATCAATTGGATCCTAAAGTTGATCTGTCTCATTCAGGCGCATACGGAGATTCGTCAAAGAAATTTGGATTATCGGTGCTATTTGTCACAAAGTCATACTTTCACAGGTTCAAAGGGAGGTCTATGAGCACAACAGGGAGGTGTGAACAAAAGACAACCATTGAACCAGTGATTTTGATGACTAAAGAAATAGAGCGCACTGACAGTTGGGATCATGATGAAAGAGAAAGGGATATTCGTCAAGGAATCGATTTGGCAACCACGTTGGAACGAATTGAGAAAAATTTTGTGATTGCAGATCCTAGAATTCCTGATAATCCAATTATATTTGCATCTGATAGCTTTCTCGAATTGACGGAATATACACGAGAAGAAGTCTTAGGAAGAAACTGTCGGTTTCTTCAAGGACCTGAAACAGATCAAGCCACTGTGTCACTGATAAGAGATGCTATCAGAGAACAGAAGGAAGTCACAGTTCAGTTAATCAACTATACAAAGACTGGTAAGAAGTTTTGGAATTTATTCCACTTGCAGCCCATGCTAGACCAAGAGGGTGAGTTGCAATACTTCATTGGTGTACAACTAGATGAAAGTGATGATTTGGAACCTCTGCGAAACCGTCTTTCAGAGAAAACAGAACAACAAAGTGTGATGTTGGTCAAAGCAACAGCAGAAAATGTGGACGAGGCTGTCCGTGAGCTTCCCGATGCCAACTTGAGACCAGAAGATTTGTGGGCAATTCATTCTGAACCTGTTTTCCCAAAACCTCACAAGAAGGACAATTGCTCTTGGTTAGCAATCAAAAAGATTACTCAACAAGGTGAAAAAATCGGACTACATCATTTTAAACCCATAAGACCACTGGGTAGTGGAGATACTGGGAGTGTTCACTTGGTGGAACTGGAAGGTTCAGGGGAACTTTATGCTATTAAAGTAATGGACAAGGCTGTAATGTTGAACAGGAACAAGGTTCATAGAGCATGCATTGAAAGAGAAATTATTTCTTATCTGGATCATCCTTTTCTTCCGACTCTGTATGCATCATTTCAGACTCCTACACACGTTTGTTTGGTAACAGACTTTTACGCTGGTGGAGAATTGTATGCATTGCTCGAAAAGCAACCATTGAAAATGTTCAAAGAGGAATCTGCAAGGTTTTATGTTGCTGAGGTTGTCATTGCATTGGAATATCTACACTGCTTAGGAATTATTTATCGGGATCTGAAGCCTGAAAATATTTTAGTTCAAAAGGAGGGTCATATTGTATTAACCGATTTTGATTTGTCATTTTTGACTTCCTCGAAGCCTCAGGTTATAAAGTTTCCCTCACAAAGCAAACGGAGGTCGAAGAAGAATCAACTGCCACCTGCATTTGTTGCAGAACCAGTATCGCACTCGAATTCATTTGTTGGAACGGAAGAGTACATTGCTCCTGAAATTATTACTGGTGCCGGCCACACGAGTGCTATTGATTGGTGGACTCTGGGTATATTATTTTATGAATTGCTCTATGGACGTTCACCATTTAGGGGAAAGAACAGGCAGAAGACTTTTGCCAACATAATGCACAAAGAACTAACCTTCCCGAGTAGTATTCCGGTAAGTCTTCAAGCAAGGCAGATGATAAATGCTTTGCTCCAAAGAGACCCAGCCGCTCGTTTAGGCTCAAAAACCGGTGCCAACGAAATCAAACAACATCCTTTTTTCCGTGAAATCAATTGGCCTCTAATCCGATGCATGACACCACCTCCGCTGGATGCTCCTCTCGAATTGATTGAAAAGGATCCAAATGCAAAGGATATAAAGTGGGAAGACGATGGTGTGCTTACAAGGTCAATGGATTTGGAGATTTTCTGA | 2481 | 41.8 | MESQSDLQKVALELTDALSTLEHTFVVSDATKPDCPIVYASSGFFTMTGYSSDEIIGRNCRFLQGADTDQNEVDKIRNAVRNGKSYCGRLLNYKKNGSPFWNLLTVTPIKDENGKVIKFIGMQVEVSKYTEGVIDKALRPNGLPQSLIRYDARQKEKALNSIEEVLQTVKHPQSLTRTTSHNSVFKRQESAQSKSDYAEAITTPGRQTYQLDPKVDLSHSGAYGDSSKKFGLSVLFVTKSYFHRFKGRSMSTTGRCEQKTTIEPVILMTKEIERTDSWDHDERERDIRQGIDLATTLERIEKNFVIADPRIPDNPIIFASDSFLELTEYTREEVLGRNCRFLQGPETDQATVSLIRDAIREQKEVTVQLINYTKTGKKFWNLFHLQPMLDQEGELQYFIGVQLDESDDLEPLRNRLSEKTEQQSVMLVKATAENVDEAVRELPDANLRPEDLWAIHSEPVFPKPHKKDNCSWLAIKKITQQGEKIGLHHFKPIRPLGSGDTGSVHLVELEGSGELYAIKVMDKAVMLNRNKVHRACIEREIISYLDHPFLPTLYASFQTPTHVCLVTDFYAGGELYALLEKQPLKMFKEESARFYVAEVVIALEYLHCLGIIYRDLKPENILVQKEGHIVLTDFDLSFLTSSKPQVIKFPSQSKRRSKKNQLPPAFVAEPVSHSNSFVGTEEYIAPEIITGAGHTSAIDWWTLGILFYELLYGRSPFRGKNRQKTFANIMHKELTFPSSIPVSLQARQMINALLQRDPAARLGSKTGANEIKQHPFFREINWPLIRCMTPPPLDAPLELIEKDPNAKDIKWEDDGVLTRSMDLEIF | 826 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 6582510 | 6590906 | - | Bda023699.1 | Bda06g00455 | 8037 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda06g00455 | 826 | TIGRFAM | sensory_box: PAS domain S-box protein | 314 | 404 | IPR000014 | - | |
Bda06g00455 | 826 | TIGRFAM | sensory_box: PAS domain S-box protein | 36 | 127 | IPR000014 | - | |
Bda06g00455 | 826 | Pfam | PAS domain | 312 | 405 | IPR000014 | - | |
Bda06g00455 | 826 | Pfam | PAS domain | 31 | 127 | IPR000014 | - | |
Bda06g00455 | 826 | Gene3D | PAS domain | 24 | 197 | - | - | |
Bda06g00455 | 826 | CDD | PAS | 312 | 404 | IPR000014 | - | |
Bda06g00455 | 826 | Pfam | Protein kinase domain | 492 | 777 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda06g00455 | 826 | SMART | serkin_6 | 490 | 777 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda06g00455 | 826 | SMART | pas_2 | 291 | 360 | IPR000014 | - | |
Bda06g00455 | 826 | SMART | pas_2 | 12 | 81 | IPR000014 | - | |
Bda06g00455 | 826 | Gene3D | Transferase(Phosphotransferase) domain 1 | 574 | 791 | - | - | |
Bda06g00455 | 826 | SMART | pac_2 | 366 | 408 | IPR001610 | - | |
Bda06g00455 | 826 | SMART | pac_2 | 87 | 129 | IPR001610 | - | |
Bda06g00455 | 826 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 31 | 123 | IPR035965 | - | |
Bda06g00455 | 826 | Gene3D | Phosphorylase Kinase; domain 1 | 489 | 573 | - | - | |
Bda06g00455 | 826 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 307 | 404 | IPR035965 | - | |
Bda06g00455 | 826 | ProSitePatterns | Protein kinases ATP-binding region signature. | 496 | 519 | IPR017441 | GO:0005524 | |
Bda06g00455 | 826 | Gene3D | PAS domain | 278 | 442 | - | - | |
Bda06g00455 | 826 | ProSiteProfiles | PAC domain profile. | 84 | 138 | IPR000700 | - | |
Bda06g00455 | 826 | ProSiteProfiles | Protein kinase domain profile. | 490 | 777 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda06g00455 | 826 | ProSiteProfiles | PAC domain profile. | 363 | 417 | IPR000700 | - | |
Bda06g00455 | 826 | CDD | STKc_phototropin_like | 488 | 801 | - | - | |
Bda06g00455 | 826 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 611 | 623 | IPR008271 | GO:0004672|GO:0006468 | |
Bda06g00455 | 826 | ProSiteProfiles | PAS repeat profile. | 289 | 362 | IPR000014 | - | |
Bda06g00455 | 826 | PANTHER | BNAA02G07840D PROTEIN | 6 | 825 | - | - | |
Bda06g00455 | 826 | ProSiteProfiles | PAS repeat profile. | 10 | 83 | IPR000014 | - | |
Bda06g00455 | 826 | PANTHER | FLIPPASE KINASE 1-RELATED | 6 | 825 | - | - | |
Bda06g00455 | 826 | SUPERFAMILY | Protein kinase-like (PK-like) | 468 | 803 | IPR011009 | - | |
Bda06g00455 | 826 | CDD | PAS | 37 | 126 | IPR000014 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00791 | Bda-Chr2:48624228 | Bda06g00455 | Bda-Chr6:6582510 | 1.59E-27 | dispersed | |
Bda06g00455 | Bda-Chr6:6582510 | Bda09g01486 | Bda-Chr9:46684330 | 2.34E-27 | dispersed | |
Bda13g00562 | Bda-Chr13:6565897 | Bda06g00455 | Bda-Chr6:6582510 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69668 | PF00069 | Pkinase | 8.70E-60 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda06g00455 | K20715 | - | jre:108997379 | 1278.46 |