Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00467 TCAATGTTAGTCGAAGATTATCAGAGCTCTGGACCCATAGTTCACGACCCTCCGACGGTCGCTCAGAGCCGTGTATATCGCCAGAAGTACGACGTCTATATTGAGGTTCTCCGCCGTCTTCAGGAATCCAATAACGAGGAAGTCGCTCAGCCTGGATTTGAAGAGGAGCTGTTGGCTCACTTTAATCGCCTCCCTGCACGGTATGCATTGGATGTGAATGTGGAGAGGGCGGAAGATGTTCTTATGCACAAAAGATTACTACATTTGGCTCATGATCCATCTAATCGACCTGCAGTTGAAATCCGCTTAGTACAGGTCCATGAAATCCACTTTGTTTTGCTTTCTGCCATTTTCTTTTTTATTCAAAATTCTAGTTTTTTATCTGTCAGCATCCATCCTCCCCCTTCCTTTGGTTCGTCTGCTAATCTTGAAAGCCTAGCACTCGAAGGCAGCAAATCTCAAGAACAAGACGAGGAGCACTCCGTACATGCCAATGCATACTTTTGCAGACCCATGCATGAGATAACCTTCTCCACAGATGACAAGCCAAAACGCCTTAGTCAGTTAACTTCCCTGCTTGCTGAGATTGGGCTCAACATCCAAGAGGCTCATGCATTTTCTTCCGTGGATGGCTATTCCTTAGACGTCTTTGTTGTCGATGGCTGGCCATATGAGGAAACGCAGCAATTGAGACTTGCATTAAAGAAGGAAGTCTCAAAGATTGAGAGGGAGGATTGGTCAAATCATATAACGTCATATCCTGTGCCCGAGCAGCCAAATACGGTGACTACCCCCGAGCAAGATTATGTCACAATACCATCAGACGGAACTGATGTATGGGAAATCGATCACAGACATCTATATTTTGAGAAAAAAGTAGCTTCTGGGACATACGGTGATCTGTATAAAGGTACATACCATAGTCAAGAAGTGGCTATCAAAGTCCTCAAGCCCGAGCACGTAACCATAGAAATGCAGCGAGAGTTTGCTCAAGAAGTCTTTATTATGAGAAAAGTTCGGCACAAGAACGTCGTACAGTTTATCGGCGCATGTACTAAACCTCCAAATCTATGCATTGTAACAGAATTTATGTCTGGTGGAAGTTTGTATGACTATTTACATAAACAAAATGGTGTTTTTAAGCTTCCATCTCTGATCAAGGTAGCGATTGATATCTGTAAGGGAATGAACTACTTGCACCAAAATAACATAATTCACAGAGATTTGAAGGCCCCCAATCTTTTGATGGATGAAAATGAAGTTATTAAGGTAGCTGATTTTGGGGTTGCCAGAGTGAAAGCTCAGTCTGGAGTAATGACAGCAGAAACGGGCACATACCGTTGGATGGCTCCCGAGGTCATAGAGCACAAGCCATATGATCATAAGGCCGATATCTTCAGTTTCGGTGTCGTCTTGTGGGAGTTACTTACGGGCAAGATTCCTTACGAATTCATGACCCCGTTACAAGCTGCCGTCGGAGTGGTCCAAAAGGGTTTAAGGCCAACCATTCCAAAAAACACACATCCTAAGCTTACTGAGTTACTGGAGAAGTGCTGGCAGCAAGACCCAGCCCTGAGACCTGACTTCTCTGAAATCATCTCCTTTTTACAGAAAATAGCCAAAGAAGCAAGTCCATTTAGAGTTCAAAAAATTACTTTTTTCTGCAGTTTCAATGCTTCAATTATTCAATCTATGTTATTAAATTTGGTGAACATGAGCAGGTTGGGAACGATAAAGAGGAGCATCGGAAGGAGAAAATGTCTGGACGGTTCTTCTCGGCTCTGA 1785 43.53 SMLVEDYQSSGPIVHDPPTVAQSRVYRQKYDVYIEVLRRLQESNNEEVAQPGFEEELLAHFNRLPARYALDVNVERAEDVLMHKRLLHLAHDPSNRPAVEIRLVQVHEIHFVLLSAIFFFIQNSSFLSVSIHPPPSFGSSANLESLALEGSKSQEQDEEHSVHANAYFCRPMHEITFSTDDKPKRLSQLTSLLAEIGLNIQEAHAFSSVDGYSLDVFVVDGWPYEETQQLRLALKKEVSKIEREDWSNHITSYPVPEQPNTVTTPEQDYVTIPSDGTDVWEIDHRHLYFEKKVASGTYGDLYKGTYHSQEVAIKVLKPEHVTIEMQREFAQEVFIMRKVRHKNVVQFIGACTKPPNLCIVTEFMSGGSLYDYLHKQNGVFKLPSLIKVAIDICKGMNYLHQNNIIHRDLKAPNLLMDENEVIKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADIFSFGVVLWELLTGKIPYEFMTPLQAAVGVVQKGLRPTIPKNTHPKLTELLEKCWQQDPALRPDFSEIISFLQKIAKEASPFRVQKITFFCSFNASIIQSMLLNLVNMSRLGTIKRSIGRRKCLDGSSRL 594
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6719315 6723968 + Bda023713.1 Bda06g00467 8049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00467 594 ProSiteProfiles ACT domain profile. 174 246 IPR002912 -
Bda06g00467 594 CDD STKc_MAP3K-like 293 536 - -
Bda06g00467 594 PRINTS Tyrosine kinase catalytic domain signature 444 454 IPR001245 GO:0004672|GO:0006468
Bda06g00467 594 PRINTS Tyrosine kinase catalytic domain signature 398 416 IPR001245 GO:0004672|GO:0006468
Bda06g00467 594 PRINTS Tyrosine kinase catalytic domain signature 507 529 IPR001245 GO:0004672|GO:0006468
Bda06g00467 594 PRINTS Tyrosine kinase catalytic domain signature 361 374 IPR001245 GO:0004672|GO:0006468
Bda06g00467 594 PRINTS Tyrosine kinase catalytic domain signature 463 485 IPR001245 GO:0004672|GO:0006468
Bda06g00467 594 Gene3D Transferase(Phosphotransferase) domain 1 366 558 - -
Bda06g00467 594 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 15 544 - -
Bda06g00467 594 Coils Coil 224 244 - -
Bda06g00467 594 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 15 544 - -
Bda06g00467 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 404 416 IPR008271 GO:0004672|GO:0006468
Bda06g00467 594 CDD ACT_TyrKc 172 238 - -
Bda06g00467 594 ProSiteProfiles Protein kinase domain profile. 287 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g00467 594 SUPERFAMILY ACT-like 171 242 IPR045865 -
Bda06g00467 594 SMART serkin_6 287 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g00467 594 SUPERFAMILY Protein kinase-like (PK-like) 264 536 IPR011009 -
Bda06g00467 594 Pfam Protein tyrosine and serine/threonine kinase 289 536 IPR001245 GO:0004672|GO:0006468
Bda06g00467 594 Gene3D Phosphorylase Kinase; domain 1 276 365 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00467 Bda15g01020 CCT
Bda06g00467 Bda14g00632 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01392 Bda-Chr1:49814324 Bda06g00467 Bda-Chr6:6719315 0 dispersed
Bda01g01431 Bda-Chr1:50235432 Bda06g00467 Bda-Chr6:6719315 2.87E-124 dispersed
Bda06g00467 Bda-Chr6:6719315 Bda13g00006 Bda-Chr13:49226 0 dispersed
Bda09g00118 Bda-Chr9:2024429 Bda06g00467 Bda-Chr6:6719315 2.78E-41 dispersed
Bda13g00679 Bda-Chr13:7710190 Bda06g00467 Bda-Chr6:6719315 2.75E-55 dispersed
Bda14g00817 Bda-Chr14:6283031 Bda06g00467 Bda-Chr6:6719315 1.68E-81 dispersed
Bda11g01805 Bda-Chr11:53078072 Bda06g00467 Bda-Chr6:6719315 2.66E-71 wgd
Bda14g00632 Bda-Chr14:4747419 Bda06g00467 Bda-Chr6:6719315 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69671 PF07714 PK_Tyr_Ser-Thr 6.40E-76 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00467 - - pvy:116144608 815.839