Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda06g00468 | ATGGATTTCTCGCTCAAGAAGTCTTTTAAATCCTACGCCTCTTTGAAGAGCGGTAGGAAGGTTTCTGCTAACGGAACTACAGACTGTACTCCTGAACAGCTCCCCATTCTCTTAGACTCTGATTCTGAAGATCGAACTCGTCTTCTTGATCGGCGCCTGTCAATGAGGGACACTGCACTCCCTGTGCGTAGCGAAGTGATCGTCAAAATCGACGACGGCGATTCTTCCACTGGCTCAACAACGATGGATTCAAAGAACACTGGCGGCAACTTATTCCGGAACTCTAGTTATGATTTCTGGAACGACGTTGAAGACGGAGATAATGCCACTGGTTCTACTGCTAGAACGGGCGATAGCTTTGATTTGGCGAGACAACGGCCAGCTTTGGACGATCCACCTTCGAAGCTGATTGGACAGTTCTTGCATAAACAGAAAGCTTCTGGTGATATATCACTGGACATGGATTTAGAAATGGATGAGCTCTGTCGAGATAAGACTTTGCCTCCAGTCGCGGAGTCTCCGGTGGTTCGGACATCTAGGGAAATCAAAGTTTCTTTCCAGCCTAATAACGAGGCTAATAACAACGACATGGTTCGAAGGCGGTGCAGAGACTCGTCGGACCAGGAAGAACATGAGAGACAACAGCAACAAGATCGTCGCATGCCTTCCAATGTCGGAGGTAATCACAAGGACGGTGGAGCCGAGGTTGTAAAGTGCACATCGAATTCTTCATTTCAGAGAGAATATTCATTCCAGAGGAACTCTGGGTTGTTGAAGACGAAAACAAGGTCTAGGTTACTCGACCCTCCTGCAGAGCCGGACCGGAGGTCCGACAGGATTCCTTCGAAGTCGGGTCAAGTGCGATCTGGGTTGTTGTCTAGAGTTATGGATGATGAAGAAGATGATCCTTTTCTGGGGGAGGATCTACCAGATGAGTATAAAAGGGCTGATTTCAGCATTTTGACTCTGCTTCAATGGGTGAGTTTGATTCTGATCATAGCAGCTTTAGTTGTCACACTTTATATTCCTTTTTTGAGGCGCAAGAATCTGTGGAAACTCAAACTGTGGAAATGGGAGTTGATGGTTTTCGTTCTGATATGTGGAAGATTGATATCTGGTTGGGGGATTAGGATAGCTGTGTTCTTCATAGAGAGAAACTTTCTTCTTCGCAAAAGGGTTTTATATTTTGTCTATGGAATTCGAAAAGCTGTCCAGAATTGTCTCTGGCTTGGTCTTGTCTTAATTGCTTGGCATCTGCTCTTTGACAAGAAGGTCGAGAGGGAAACTAACAGTAAAGCACTTGAATATGTAACTAAGATTCTTGTCTGTCTATTGGTCGGCACCCTACTTTGGTTGGTTAAAACTCTCATAATCAAAGTCCTGGCCTCCTCATTCCATGTCAGCACTTATTTTGATCGAATTCAGGATTCGCTTTTCAACCAATATGTAATCGAGACACTATCTGGACCGCCATTGATTGAGATTCAAAAGAACGAAGAAGACGAAGAAAAGCTCGCCAACGAGGTCCGAAAGTTGCAGAATGCAGGGGCTACCGTCCCTCCTGATCTTAAAGAAACCATGAAAGGAGGAAGGGTGATAGGGAGTGGAGGGCTCCAGAAAAGCCCCCGTGGGAAAAGCGAAAAGCTTTCTCGGACAATGTCTAATAAGGGAGATGAAGGTATTACCATTGACCATTTACACAAGCTGAGTCCTAAAAATGTGTCAGCTTGGAAAATGAAGAGATTGATTAAGTTAGTCCGGAATGGGGCTCTTTCTACTCTGGATGAGCAGATAAAGGACTCCACTCAGGGGGATGAGTCTGCTACCAAGATTAGAAGTGAAGTAGAGGCAAAAACTGCAGCCAGGAGAATTTTTCTGAATGTGGCCAAGCATGGAAACAAGTACATCTATCTCGAGGATATAATGCGCTTCATGCCAGAAGATAAAGCTTTGAAAGCTTTGAATCTTTTTGAAGGAGCATCTGAGAGCAGTAGAATAAGCAAGGCTTCTTTGAAAAACTGGGTGGTAAATGCATTTAGAGAGCGCAGGGCCCTTGCTTTGACACTGAACGATACCAAAACAGCCGTGAACAAGCTTCATCACACGGTGAATGTGGTGGTTGGCATCCTAATCGTGGTCATATGGCTGCTCATACTCGAAATCGCCACCAGCAAATTTCTCCTTTTCGTTAGCTCCCAACTCGTTCTCGTTGCATTCGTATTTGGAAACACGTGCAAGACTGTGTTTGAAGCGATAATCTTTCTATTTTCGATGCATCCGTTTGACGTTGGAGATCGGTGCGAAATTGATGGAGTTCAGATGGTTGTAGAAGAAATGAACATCTTAACGACTGTTTTTCTGAGATATGATAACCAGAAGATAATGTATCCGAACAGTGTTCTTGCAACTAAAGCCATACATAACTTCTACCGCAGTCCTGACATGGGAGATGGTGTTGAATTCTGCCTCCATATATCTACTCCTGCCGAAAAGATTGCTCTAATTAGACAGAGAGTACTGAGTTACATAGAGAACAAGAAGGAGCATTGGCATCCCAATCCTATGATTGTAGTGAAGGACTTGGAAGAGTTAAACAGGCTGAGAATAGCGGTCTGGCTGACGCACAGAATGAACCATCAAGACATGGGAGAAAGGTGGGCTAGGAGAGCCCTCCTGGTTGAAGAAATGGCAAAAATTTTCAGAGAGCTCGACATCCAGTATCGCCTTTACCCGCTCGACATTAATGTCCGTTCGATGCCTCCCTCGAGCTCCCCTGGTTTTCTATCTAACTAG | 2793 | 44.86 | MDFSLKKSFKSYASLKSGRKVSANGTTDCTPEQLPILLDSDSEDRTRLLDRRLSMRDTALPVRSEVIVKIDDGDSSTGSTTMDSKNTGGNLFRNSSYDFWNDVEDGDNATGSTARTGDSFDLARQRPALDDPPSKLIGQFLHKQKASGDISLDMDLEMDELCRDKTLPPVAESPVVRTSREIKVSFQPNNEANNNDMVRRRCRDSSDQEEHERQQQQDRRMPSNVGGNHKDGGAEVVKCTSNSSFQREYSFQRNSGLLKTKTRSRLLDPPAEPDRRSDRIPSKSGQVRSGLLSRVMDDEEDDPFLGEDLPDEYKRADFSILTLLQWVSLILIIAALVVTLYIPFLRRKNLWKLKLWKWELMVFVLICGRLISGWGIRIAVFFIERNFLLRKRVLYFVYGIRKAVQNCLWLGLVLIAWHLLFDKKVERETNSKALEYVTKILVCLLVGTLLWLVKTLIIKVLASSFHVSTYFDRIQDSLFNQYVIETLSGPPLIEIQKNEEDEEKLANEVRKLQNAGATVPPDLKETMKGGRVIGSGGLQKSPRGKSEKLSRTMSNKGDEGITIDHLHKLSPKNVSAWKMKRLIKLVRNGALSTLDEQIKDSTQGDESATKIRSEVEAKTAARRIFLNVAKHGNKYIYLEDIMRFMPEDKALKALNLFEGASESSRISKASLKNWVVNAFRERRALALTLNDTKTAVNKLHHTVNVVVGILIVVIWLLILEIATSKFLLFVSSQLVLVAFVFGNTCKTVFEAIIFLFSMHPFDVGDRCEIDGVQMVVEEMNILTTVFLRYDNQKIMYPNSVLATKAIHNFYRSPDMGDGVEFCLHISTPAEKIALIRQRVLSYIENKKEHWHPNPMIVVKDLEELNRLRIAVWLTHRMNHQDMGERWARRALLVEEMAKIFRELDIQYRLYPLDINVRSMPPSSSPGFLSN | 930 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 6725575 | 6728940 | + | Bda023714.1 | Bda06g00468 | 8050 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda06g00468 | 930 | MobiDBLite | consensus disorder prediction | 196 | 218 | - | - | |
Bda06g00468 | 930 | SUPERFAMILY | Sm-like ribonucleoproteins | 750 | 809 | IPR010920 | - | |
Bda06g00468 | 930 | MobiDBLite | consensus disorder prediction | 108 | 135 | - | - | |
Bda06g00468 | 930 | Gene3D | - | 760 | 809 | IPR023408 | - | |
Bda06g00468 | 930 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN | 3 | 922 | - | - | |
Bda06g00468 | 930 | MobiDBLite | consensus disorder prediction | 183 | 236 | - | - | |
Bda06g00468 | 930 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN 5 | 3 | 922 | IPR016688 | - | |
Bda06g00468 | 930 | MobiDBLite | consensus disorder prediction | 265 | 282 | - | - | |
Bda06g00468 | 930 | MobiDBLite | consensus disorder prediction | 262 | 292 | - | - | |
Bda06g00468 | 930 | MobiDBLite | consensus disorder prediction | 519 | 557 | - | - | |
Bda06g00468 | 930 | PIRSF | Memb_At2g17000 | 56 | 930 | IPR016688 | - | |
Bda06g00468 | 930 | Pfam | Mechanosensitive ion channel | 703 | 906 | IPR006685 | GO:0016020|GO:0055085 | |
Bda06g00468 | 930 | Coils | Coil | 495 | 515 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g00302 | Bda-Chr3:2654706 | Bda06g00468 | Bda-Chr6:6725575 | 1.31E-150 | dispersed | |
Bda06g00468 | Bda-Chr6:6725575 | Bda11g00316 | Bda-Chr11:3506350 | 5.93E-175 | dispersed | |
Bda14g00631 | Bda-Chr14:4734301 | Bda06g00468 | Bda-Chr6:6725575 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda06g00468 | K22048 | - | csv:101210264 | 1231.08 |