Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00468 ATGGATTTCTCGCTCAAGAAGTCTTTTAAATCCTACGCCTCTTTGAAGAGCGGTAGGAAGGTTTCTGCTAACGGAACTACAGACTGTACTCCTGAACAGCTCCCCATTCTCTTAGACTCTGATTCTGAAGATCGAACTCGTCTTCTTGATCGGCGCCTGTCAATGAGGGACACTGCACTCCCTGTGCGTAGCGAAGTGATCGTCAAAATCGACGACGGCGATTCTTCCACTGGCTCAACAACGATGGATTCAAAGAACACTGGCGGCAACTTATTCCGGAACTCTAGTTATGATTTCTGGAACGACGTTGAAGACGGAGATAATGCCACTGGTTCTACTGCTAGAACGGGCGATAGCTTTGATTTGGCGAGACAACGGCCAGCTTTGGACGATCCACCTTCGAAGCTGATTGGACAGTTCTTGCATAAACAGAAAGCTTCTGGTGATATATCACTGGACATGGATTTAGAAATGGATGAGCTCTGTCGAGATAAGACTTTGCCTCCAGTCGCGGAGTCTCCGGTGGTTCGGACATCTAGGGAAATCAAAGTTTCTTTCCAGCCTAATAACGAGGCTAATAACAACGACATGGTTCGAAGGCGGTGCAGAGACTCGTCGGACCAGGAAGAACATGAGAGACAACAGCAACAAGATCGTCGCATGCCTTCCAATGTCGGAGGTAATCACAAGGACGGTGGAGCCGAGGTTGTAAAGTGCACATCGAATTCTTCATTTCAGAGAGAATATTCATTCCAGAGGAACTCTGGGTTGTTGAAGACGAAAACAAGGTCTAGGTTACTCGACCCTCCTGCAGAGCCGGACCGGAGGTCCGACAGGATTCCTTCGAAGTCGGGTCAAGTGCGATCTGGGTTGTTGTCTAGAGTTATGGATGATGAAGAAGATGATCCTTTTCTGGGGGAGGATCTACCAGATGAGTATAAAAGGGCTGATTTCAGCATTTTGACTCTGCTTCAATGGGTGAGTTTGATTCTGATCATAGCAGCTTTAGTTGTCACACTTTATATTCCTTTTTTGAGGCGCAAGAATCTGTGGAAACTCAAACTGTGGAAATGGGAGTTGATGGTTTTCGTTCTGATATGTGGAAGATTGATATCTGGTTGGGGGATTAGGATAGCTGTGTTCTTCATAGAGAGAAACTTTCTTCTTCGCAAAAGGGTTTTATATTTTGTCTATGGAATTCGAAAAGCTGTCCAGAATTGTCTCTGGCTTGGTCTTGTCTTAATTGCTTGGCATCTGCTCTTTGACAAGAAGGTCGAGAGGGAAACTAACAGTAAAGCACTTGAATATGTAACTAAGATTCTTGTCTGTCTATTGGTCGGCACCCTACTTTGGTTGGTTAAAACTCTCATAATCAAAGTCCTGGCCTCCTCATTCCATGTCAGCACTTATTTTGATCGAATTCAGGATTCGCTTTTCAACCAATATGTAATCGAGACACTATCTGGACCGCCATTGATTGAGATTCAAAAGAACGAAGAAGACGAAGAAAAGCTCGCCAACGAGGTCCGAAAGTTGCAGAATGCAGGGGCTACCGTCCCTCCTGATCTTAAAGAAACCATGAAAGGAGGAAGGGTGATAGGGAGTGGAGGGCTCCAGAAAAGCCCCCGTGGGAAAAGCGAAAAGCTTTCTCGGACAATGTCTAATAAGGGAGATGAAGGTATTACCATTGACCATTTACACAAGCTGAGTCCTAAAAATGTGTCAGCTTGGAAAATGAAGAGATTGATTAAGTTAGTCCGGAATGGGGCTCTTTCTACTCTGGATGAGCAGATAAAGGACTCCACTCAGGGGGATGAGTCTGCTACCAAGATTAGAAGTGAAGTAGAGGCAAAAACTGCAGCCAGGAGAATTTTTCTGAATGTGGCCAAGCATGGAAACAAGTACATCTATCTCGAGGATATAATGCGCTTCATGCCAGAAGATAAAGCTTTGAAAGCTTTGAATCTTTTTGAAGGAGCATCTGAGAGCAGTAGAATAAGCAAGGCTTCTTTGAAAAACTGGGTGGTAAATGCATTTAGAGAGCGCAGGGCCCTTGCTTTGACACTGAACGATACCAAAACAGCCGTGAACAAGCTTCATCACACGGTGAATGTGGTGGTTGGCATCCTAATCGTGGTCATATGGCTGCTCATACTCGAAATCGCCACCAGCAAATTTCTCCTTTTCGTTAGCTCCCAACTCGTTCTCGTTGCATTCGTATTTGGAAACACGTGCAAGACTGTGTTTGAAGCGATAATCTTTCTATTTTCGATGCATCCGTTTGACGTTGGAGATCGGTGCGAAATTGATGGAGTTCAGATGGTTGTAGAAGAAATGAACATCTTAACGACTGTTTTTCTGAGATATGATAACCAGAAGATAATGTATCCGAACAGTGTTCTTGCAACTAAAGCCATACATAACTTCTACCGCAGTCCTGACATGGGAGATGGTGTTGAATTCTGCCTCCATATATCTACTCCTGCCGAAAAGATTGCTCTAATTAGACAGAGAGTACTGAGTTACATAGAGAACAAGAAGGAGCATTGGCATCCCAATCCTATGATTGTAGTGAAGGACTTGGAAGAGTTAAACAGGCTGAGAATAGCGGTCTGGCTGACGCACAGAATGAACCATCAAGACATGGGAGAAAGGTGGGCTAGGAGAGCCCTCCTGGTTGAAGAAATGGCAAAAATTTTCAGAGAGCTCGACATCCAGTATCGCCTTTACCCGCTCGACATTAATGTCCGTTCGATGCCTCCCTCGAGCTCCCCTGGTTTTCTATCTAACTAG 2793 44.86 MDFSLKKSFKSYASLKSGRKVSANGTTDCTPEQLPILLDSDSEDRTRLLDRRLSMRDTALPVRSEVIVKIDDGDSSTGSTTMDSKNTGGNLFRNSSYDFWNDVEDGDNATGSTARTGDSFDLARQRPALDDPPSKLIGQFLHKQKASGDISLDMDLEMDELCRDKTLPPVAESPVVRTSREIKVSFQPNNEANNNDMVRRRCRDSSDQEEHERQQQQDRRMPSNVGGNHKDGGAEVVKCTSNSSFQREYSFQRNSGLLKTKTRSRLLDPPAEPDRRSDRIPSKSGQVRSGLLSRVMDDEEDDPFLGEDLPDEYKRADFSILTLLQWVSLILIIAALVVTLYIPFLRRKNLWKLKLWKWELMVFVLICGRLISGWGIRIAVFFIERNFLLRKRVLYFVYGIRKAVQNCLWLGLVLIAWHLLFDKKVERETNSKALEYVTKILVCLLVGTLLWLVKTLIIKVLASSFHVSTYFDRIQDSLFNQYVIETLSGPPLIEIQKNEEDEEKLANEVRKLQNAGATVPPDLKETMKGGRVIGSGGLQKSPRGKSEKLSRTMSNKGDEGITIDHLHKLSPKNVSAWKMKRLIKLVRNGALSTLDEQIKDSTQGDESATKIRSEVEAKTAARRIFLNVAKHGNKYIYLEDIMRFMPEDKALKALNLFEGASESSRISKASLKNWVVNAFRERRALALTLNDTKTAVNKLHHTVNVVVGILIVVIWLLILEIATSKFLLFVSSQLVLVAFVFGNTCKTVFEAIIFLFSMHPFDVGDRCEIDGVQMVVEEMNILTTVFLRYDNQKIMYPNSVLATKAIHNFYRSPDMGDGVEFCLHISTPAEKIALIRQRVLSYIENKKEHWHPNPMIVVKDLEELNRLRIAVWLTHRMNHQDMGERWARRALLVEEMAKIFRELDIQYRLYPLDINVRSMPPSSSPGFLSN 930
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6725575 6728940 + Bda023714.1 Bda06g00468 8050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00468 930 MobiDBLite consensus disorder prediction 196 218 - -
Bda06g00468 930 SUPERFAMILY Sm-like ribonucleoproteins 750 809 IPR010920 -
Bda06g00468 930 MobiDBLite consensus disorder prediction 108 135 - -
Bda06g00468 930 Gene3D - 760 809 IPR023408 -
Bda06g00468 930 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 3 922 - -
Bda06g00468 930 MobiDBLite consensus disorder prediction 183 236 - -
Bda06g00468 930 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 3 922 IPR016688 -
Bda06g00468 930 MobiDBLite consensus disorder prediction 265 282 - -
Bda06g00468 930 MobiDBLite consensus disorder prediction 262 292 - -
Bda06g00468 930 MobiDBLite consensus disorder prediction 519 557 - -
Bda06g00468 930 PIRSF Memb_At2g17000 56 930 IPR016688 -
Bda06g00468 930 Pfam Mechanosensitive ion channel 703 906 IPR006685 GO:0016020|GO:0055085
Bda06g00468 930 Coils Coil 495 515 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00302 Bda-Chr3:2654706 Bda06g00468 Bda-Chr6:6725575 1.31E-150 dispersed
Bda06g00468 Bda-Chr6:6725575 Bda11g00316 Bda-Chr11:3506350 5.93E-175 dispersed
Bda14g00631 Bda-Chr14:4734301 Bda06g00468 Bda-Chr6:6725575 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00468 K22048 - csv:101210264 1231.08