Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00482 ATGGGAGGCCTCTTCGACCTTCCCTATGCTTCTTCCACTGTGAAATGGCTGGGTTTTGTGACGGCCGTCTGGGTCCAAGCCATTTCCGGCAACAACTACACTTTCTCAAACTACTCGGATGCGCTTAAGACTCTTATGAATCTTACCCAGCTCGAGCTCAACAATCTCTCCGTCGCCAAGGATGTCGGCAAAGCTTTTGGCCTTCTCGCTGGTCTTGCGTCTGATCAGTTTCCTACTTGGGTCATTCTTCTCATCGGCTCGGTTGAAGGGCTCGTCGGTTATGGCGTTCAGTGGCTGGTCGTCAGCCAGAGAGTTAAACCCCTTCCTTACTGGCAGATGTGTGTCTTCCTCTGCTTGGGAGGCAACAGCACAACGTGGATGAACACGGCGGTGTTGGTGACATGCATCCGAAACTTCCGTAATAATCGAGGCCCGGTCTCCGGCATTCTCAAAGGCTATGTGGGTCTCAGCACTGCCATATTCACCGTCATCTGCGCAGCTCTCTTCTCTAGCGACCCATCCTCATTTCTCGTCATGCTTGCCGTCGTTCCCTTTGCGGTTTGCCTCGCCGCCATCTTCTTCCTCCGCGAGGTTTCCCCTGCCATAGCCACCGCCGACGAGCCGGAAGAATCCAGCTATTTTATGTTCTTCAACGCCGTCGCCGTCGTCGTCGCTCTTTATTTATTATCATACGACTTCGTCTCAAATCCGACCGCTATTTTCGCTCAGCTATTCTCAATCATGTTGTTGATTCTATTAGCTTCTCCTTTGGCTATTCCCGGGCATTCATTTCTGAAAAGCTGGTACTCTTACCGGATTGCATCGAGTCCTCTTAGGGATATCGAAGGTCGCGCTGAAGAACCATTGCTAAGGGAAGAAATAGCAGCGCAGGCAGAAGAAAAGACGGTGGAAGCAGAGAGTGCTGGGAAACCGGTGATCGGAGAGGAGCACACAATTATAGAGGCGATGAAAACGGTAGATTTCTGGATCTTGTTCGTGTCGTTTCTTTGCGGAGTAGGCACAGGGCTAGCCGTGATCAACAATATGGGACAGATAGGGTTGGCACTAGGATACGACGATGTTTCGATCTTCGTCTCCCTCACCAGTATTTGGGGCTTCTTCGGCCGTATTCTATCCGGCTCTGTTTCGGAGCACTTTATCAAGAAAGCCGGAACACCAAGACCAGTTTGGAATGCGGCTTCTCAGATCGTGATGGCCGGTGGGTACACTCTAATGGCCATCGCCGTTCCGGGTTCACTCTACATTGGCTCCATCGTCGTCGGAATCTGCTACGGAATCCGAATTGCGATCACAGTTCCGACAGCATCCGAACTCTTCGGACTCAAATACTACGGTCTCATATACAACATTCTCATTCTCAACCTCCCCCTCGGTTCTTTCCTTTTCTCCGGCCTACTTGCCGGTATATTATACGACATGGAGGCCACAGCCACGTCTGGAGGGGGAAATACCTGCGTGGGCAGTCACTGTTATAAGGTTGTGTTTATAGTAATGGCGGCTGCGTGTGTGATTGGGTTTTGTTTGGACGTCGTACTGTCGTTTAGGACAAAAACTGTTTACTCCAAGATTCAGGCGAGCATTGAGCAAGAAAACGAAGGAAGCAGTTGA 1629 50.77 MGGLFDLPYASSTVKWLGFVTAVWVQAISGNNYTFSNYSDALKTLMNLTQLELNNLSVAKDVGKAFGLLAGLASDQFPTWVILLIGSVEGLVGYGVQWLVVSQRVKPLPYWQMCVFLCLGGNSTTWMNTAVLVTCIRNFRNNRGPVSGILKGYVGLSTAIFTVICAALFSSDPSSFLVMLAVVPFAVCLAAIFFLREVSPAIATADEPEESSYFMFFNAVAVVVALYLLSYDFVSNPTAIFAQLFSIMLLILLASPLAIPGHSFLKSWYSYRIASSPLRDIEGRAEEPLLREEIAAQAEEKTVEAESAGKPVIGEEHTIIEAMKTVDFWILFVSFLCGVGTGLAVINNMGQIGLALGYDDVSIFVSLTSIWGFFGRILSGSVSEHFIKKAGTPRPVWNAASQIVMAGGYTLMAIAVPGSLYIGSIVVGICYGIRIAITVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDMEATATSGGGNTCVGSHCYKVVFIVMAAACVIGFCLDVVLSFRTKTVYSKIQASIEQENEGSS 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6849496 6851405 + Bda023727.1 Bda06g00482 8064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00482 542 Pfam Nodulin-like 15 260 IPR010658 -
Bda06g00482 542 Gene3D MFS general substrate transporter like domains 288 526 IPR036259 -
Bda06g00482 542 Gene3D MFS general substrate transporter like domains 16 278 IPR036259 -
Bda06g00482 542 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 9 537 - -
Bda06g00482 542 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 537 - -
Bda06g00482 542 SUPERFAMILY MFS general substrate transporter 46 524 IPR036259 -
Bda06g00482 542 CDD MFS_Mch1p_like 15 512 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00482 Bda-Chr6:6849496 Bda14g00054 Bda-Chr14:452675 7.81E-85 dispersed
Bda01g00079 Bda-Chr1:12222722 Bda06g00482 Bda-Chr6:6849496 4.97E-84 transposed
Bda06g00170 Bda-Chr6:2395320 Bda06g00482 Bda-Chr6:6849496 2.97E-50 transposed
Bda12g00609 Bda-Chr12:24407476 Bda06g00482 Bda-Chr6:6849496 4.30E-125 transposed
Bda15g00676 Bda-Chr15:10207709 Bda06g00482 Bda-Chr6:6849496 4.92E-107 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00482 - - zju:107427514 782.326