Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00513 TCTACTCAATATTCTCTTGCAGAGGCCTATGATTCGCTTGATCCAACTGGAAATATCACTATCAAATGGGATATAATAACCTGGACTCCAGATGGTTATGTTGCTGTCGTCACGATGTACAATTTCCAGCAATATCGTCATATTCAAGCCCCTGGTTGGAGTTTAGGGTGGACATGGGCAAAGAAGGAAGTAATCTGGAGCATGGTGGGAGCCCAAACAACAGAGCAAGGAGATTGCTCCAAATTCAAAGGCAATGTTCCCCATTGCTGTAAAAAGGATCCAACAGTTGTGGATTTACTTCCCGGAACACCTTACAACCAGCAGATTGCGAATTGTTGCAAAGGCGGTGTCATAAACTCGTGGGTGCAGGACCCTTCCAATGCAGCCAGCTCGTTCCAAGTCAGTGTTGGTTTGGCCGGAACGACTAACAAAACAGTTAGAGTGCCGAAAAACTTTACACTCAAAGCGCCTGGCCCCGGCTATACTTGTGGGCCCGCAAAGATCGGGAAACCGACTAAATTTATCTCCGCTGATACGAGAAGAACGACACAAGCTCTGATGACGTGGAACGTTACTTGCACGTATTCGCAATTTCTCGCTCAAAAGACGCCAACCTGTTGTGTTTCTCTCTCGTCCTTCTACAATGACACTATCGTAAACTGCCCAACCTGCACTTGTGGCTGTCAGAACAACATAACAGATCCTGGGAGTTGTGTCGACCCGGATTCTCCATACTTAGCCTCGGTCGTATCGAGTCGTAAATCGAGTAATACTCTCGTTCAGTGTACGAGTCATATGTGTCCGATTAGAGTCCATTGGCATGTGAAGCTCAATTACAAGGAGTATTGGAGGGTGAAGATCACAATCACGAATTTCAACTACCGAATGAATTACACGTTGTGGAATCTCGTCGTTCAACACCCGAATTTCGATAATCTTACTCAGTTGTTCAGCTTTAATTACAAGTCGCTGACTCCCTATGAAGGCTTAAACGATACTGCTATGCTATGGGGCGTCAAGTTTTACAACGATTTGTTGATGGAGGCAGGCCCTCTCGGAAACGTACAATCCGAACTACTGTTCCGAAAAGACAAAAATACCTTTACTTTCGATAAGGGTTGGGCTTTTCCGAGAAGAATTTATTTCAACGGCGATAACTGCGTGATGCCACCTCCAGACGCGTATCCATGGCTGCCTAATACGAGTACCCGGCAAGCCATTTCGATAGTTCATTATTTCATTATTATGGCAGCTTTGGCATTCCTATCGGCCTATGCA 1278 45.54 STQYSLAEAYDSLDPTGNITIKWDIITWTPDGYVAVVTMYNFQQYRHIQAPGWSLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVINSWVQDPSNAASSFQVSVGLAGTTNKTVRVPKNFTLKAPGPGYTCGPAKIGKPTKFISADTRRTTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVNCPTCTCGCQNNITDPGSCVDPDSPYLASVVSSRKSSNTLVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYRMNYTLWNLVVQHPNFDNLTQLFSFNYKSLTPYEGLNDTAMLWGVKFYNDLLMEAGPLGNVQSELLFRKDKNTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNTSTRQAISIVHYFIIMAALAFLSAYA 426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7367811 7370063 + Bda033762 Bda06g00513 8095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00513 426 PANTHER COBRA-LIKE PROTEIN 2 423 - -
Bda06g00513 426 PIRSF COBRA 1 426 IPR006918 GO:0010215|GO:0031225
Bda06g00513 426 Pfam COBRA-like protein 33 196 IPR006918 GO:0010215|GO:0031225
Bda06g00513 426 PANTHER PROTEIN COBRA 2 423 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00513 Bda-Chr6:7367811 Bda07g01033 Bda-Chr7:12187795 0 dispersed
Bda06g00512 Bda-Chr6:7363540 Bda06g00513 Bda-Chr6:7367811 1.71E-96 tandem
Bda15g00877 Bda-Chr15:14326156 Bda06g00513 Bda-Chr6:7367811 1.52E-135 transposed
Bda15g01047 Bda-Chr15:19498647 Bda06g00513 Bda-Chr6:7367811 3.08E-109 transposed
Bda15g00631 Bda-Chr15:9445757 Bda06g00513 Bda-Chr6:7367811 3.56E-108 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00513 - - jre:109004756 809.675