Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00532 ATGGAGAAGAGTAGCGATGGAGGAGATGATCACAGCTCAGGATGGCTCGAAGTGAGAAAGAGACACAGAAACAGTTCAAAGTTTTCTCTACAGAGTTCTGATGGGGAAATTTCAGGAAAAAACTCTTCTAAATGTCAGAGTATTCAGAATTCATTGGGTAAACATGCTGGGCGTGAGAACTGCAGATCTCATCCTTCAAAATCAGGGAAAAGTAATGCTGTGCACTTTAATGATGTTGCTGGCAATTCTCTTCCCCTGCCAAATGAAGACAAAAAATGTAGTCACTATCTTGATAAACTTGTTATAAGGCAAGATGGGTCTACAAAGCCATCACCCGCATTTGTTACTAATTCTCTTGGTGAAAGTGGAGATTGTGATAAAAATTTTAAATCTGATAAGCTTCAGGTCGTTCACAAAATAAAGTGGGGTCATCTAGAGGATGCTGATTTGTTGCTAAATGATAATGGTCTTGAAGCTGGAATCAAATTTGGTGATATAGAAGGTGCTAATGTAGTTTGCTCTAGGAAGCAAGAAGATAGCCCTGACGTTGGGTTATCTATAAATCCTAATCTATCCTTATCACTAGATAGTGTTCCCCGTCAGACAGTTTTAACAACTCAAAGGGATGATTTATGTGATGATAACAGTCGAGAAGTCAATGAGATATCTTCAGAATGTGTAGAATTACAAGTCAAAAGTAAAGTTAATGTCGATCCTGATCATAATTCAAACAGTGAAGTAATAAATACCGAGGATGACAAGCATGTAAATGATTGTTTTGTAAGAAATTCTCCCTTGATTGAAGAAGCTGTGAAATTTCAAGTTTTAACAGAGGTAGATGATTCTGAAATTTCTAATGCAATGAAAAAGAATGGAATTTCAAGATCATCTCTGACTGCCCATGATACAGAGTTAGTTCCAGCTAAAAGGGTTGAATTTGAAGCTTCTAGTAAATCAATATATTCTGTTGAAGAGGTTCAGATTCCTGAGGCGGGTGCAAAACATGATGATGCACCAAACACAAATCTCGGGAGTGCCCTTGGCGAAGGCGAGACAGCTGAAAGTAAAGAAAGGTTTAGGCAGCGTCTCTGGTGCTTTCTGTTTGAAAATCTTAATAGGGCAGTAGATGAACTTTATCTTCTTTGCGAACTTGAATGCGATGTGGAACAGATGAAAGAGGCTGTTCTTGTTCTTGAAGAGGCTGCATTTGATTTTAGAGAACTAAATGGTCGCGTGGAGGAGTTTGAAAAGGTGAAGAAGTCCTCTTTATTGGCAGTTGCTGATGGAGTTTTGCCAATAACTTTAAAGGGTGACCACCGCAGGCCACATGCTCTCTCTTGGGAGGTTCGAAGGATGACTACTTCATCTCACAGAGCAGAGATACTTTCTTCGTCGCTGGAGGCTTTTAAGAAAATTCGTCAAGAGAGAGCTATCGACCACACATCAAATGATACTAATATCCAGGGGCCTGAGCCACTCAGTCTCGAACCATTCGCCGAAACAAACTCATCTGTGGTAACTCACGATGCACCTAGTGCGAAAGATTCAGTTACAAAGTCAAACTTAGAAAGTAGAGATTTGAATATCACCCTTGGTGTCCAGAGTGGAGAAGGGAGAAAGATTGAGTCAACCAGATTCAGGAAGATGAATTTGGCACAAAATGGTCGTCCCTCACCACCATTTAGTGTTAATTCATCTAAGCCACCTGTTGCTGGAAAGTGTAAGAAAGAACAACTTGAGTTGGACGTGGAGAAGTTACTTCCTAGGAGAGAGAAAGTCCGCACAGAAAATAATAGTGATAAAATTCAGAAATCTACAGATCAGTTCAAAAAGGTGACAGTGTTTCCTGAAAAAGATAAGGAAAAAGAAAGGAGGAATACTGCTCCATGGAAATCCATGGATGCTTGGAAAGAGAAGAGGAACTGGGAGGACATTCTTTCCTCCTCATCCCGAGGCACTGCACGTGTTTCACATTCACCTGGCATGAACAGGAAAAGTGCTGAGCGAGCTCGTGTATTGCATGATAAACTAATGTCACCCGAGAAGAAGAAAAAGACTGCAGTGGATCTAAAAAGAGAAGCAGAGGAAAAGCATGCCCGTGCAATGAAAATCAGAAGTGAGTTAGAGAACGAGAGAGTTCAAAAGCTGCAACGCACGTCAGAAAAATTAAATCGTGTCAATGAATGGCAGGCTGTACGTACTATGAAATTACGGGAAGGAATGTTTGCACGTCAACAACGCAGCGAATCTCGGCACGAAGCATTTCTAGCCCAAGTTGTGAAGAGAGCTGGCGATGAGAGCAGCAAAGTAAATGAGGTCCGTTTTATCACCTCTTTAAATGAAGAAAACAAAAAAATAATATTGCGCCAGAAGCTTCATGGTTCTGAGTTAAGGAGAGCTGAAAAACTGCAAGTGATGAAAACTAAGCAAAAGGAGGATATGGCCCGGGAAGAAGCTGTTTTAGAACGAAGAAAACTTATTGAAGCTGAGAAGTTGCAGCGCCTTGCTGAAACACAGCGGAAGAAGGAAGAGGCTCACGGTAGAAGGGAGGAGGAACGTAAAGCATCAAGTGCAGCCCGTGAAGCAAGGGCATTAGAACAAATACGAAGAAAGGAAGAAAGGGCAAAAGCCCAGCAAGAAGAAGCTGAACTTTTGGCCCAGAAGTTGGCTGAGAGACTTAGTGAAAGCGAGCAACGTCGGAAGTTTTATTTGGAGCAAATACGGGAAAGGGCTTCTATGGATTTTCGAGATCAAGCTTCACCTTTAATGCGTCGATCAGTGAACAAGGATGGGCAGGGTCGATCTCCACCGGCTAATAGTGGAGAAGACCGGCAACCAAGCAACTCTGACTTTGTGGGTACTAGTTCTGTAGTGGACAATGCTGTCCTTCAAAATTCAGTGAAGCGGAAGATTAAAAGAATTCGGCAGAGGCTTATGGCTTTAAAGTATGAATTTATTGAGCCTTCTATCAGTGCAGAAAATGTTGGAATTGGTTATAGAACAGCAGTTGGAACTGCAAGAGTAAAAGTTGGTAGGTGGCTACAAGAACTTCAGCGACTTCGGCAAGCTAGAAAAGAAGGAGCTGCCAGTATTGGGCTAATAATTGCTGATATGATCAAGTTCTTGGATGGAAAAGACCCTGAGCTACAAGCTTCCCGCCAGGCTGGTTTACTTGATTTTATTGCTTCAGCTCTTCCTGCCTCTCATACATCTAAACCTGAAGCCTGCCAGGTGACAATTCATCTTCTAAGATTGCTGAGGGTGGTGTTATCTGTGCCGGCAAATAGGAGTTACTTCCTTGCACAGAATCTCTTACCACCAATCATCCCTATGCTATCAGCAGCACTTGAGAACTACATAAAAATTGCTGCATCTATTAATGCCCCTGGCAACTTGAATATTTCGTCAAGTAAAACATCGATTGAAAATTTTGAGTCAATCTCTGAAGTGGTTGATGGCTTTTTGTGGACTGTCAGTACAATAATGGACCATATAAGTTTTGAAGAACGACAAATTCAAATGTGGGACGGATTGCTAGAGCTGTTGATCACCTACCAAGTTATTCACCGGTTGCGAGATCTTTTTGCACTTTATGATAGACCCCAAGTCGAAGGGTCGCCATTTCCTTCTTCCATTCTCTTAAGCGTAAACCTTTTGGTGGTTTTAACTTCAAGACCTGGAATGAGTCGCTCCATTAATTGGGAGTTACTTCCCATTGAGACAATTCAAAAGGTGGAATTAGCTGACTTGTCTGATTCAAAAGTTTCCCATGTAACTGAACCTAATGGAGATTGTGAACCGCCATCACCTCATATTAGTTATGCTGGTGGTGCATATATATCAGACGTGGCAGCAGATTCTCTAGCATCTGAAGATACTCTAGCCGATAGTAAAATGGAGCAGACTGTCTCTTCAGGTGAGTTGAATGCTGTCCAGAATGATATTTTGACTGAAGTTGAGAAAGGTAAAGAAATTCAGAAGCCATTAATACCTCAGAGGTATGAGGACGGTGGAGTGAATTATGTTACAGAGCAAAAAGTTGAAATGAACTTAGAGCAACCAGTAGCAATTCTTCTATCTTCCATGTCTGATACTGGCCTTGTCAGTCTTACTTCTTTGTTAACAGCTGTGCTGCTACAAGCAAACAATAGACTCTCTTCTGAGCAGGGCTCCTATGTTCTTCCATCTAATTTTGAAGAGGTTGCTGTTTGTGTGCTAAAGGTGTTGAATCATCTTGCACTTTTGGATCTGAAGTTCATGCAGAGAATGCTAGCTAGGTCAGACTTAAGGATGGAGTTTTTTCATTTAATGAGCTTCCTTCTTTCTCACTGCACCAGCAAGTGGAAAGACGCAAAAGATCAGATTGGTTTACTTCTGCTTGAATCTTTGCTACTTCTTGCTCACTTTGCCTTATTCCATCCTGGCAATCAAGCAGTCCTACGCTGGGGAAAGAGTCCTACTATCCTTCACAAGGTATGCGATCTACCTTTTGTGTTCTTCAGTGACTCCGAATTGATGCCTGTCTTAGGAAGCACATTAGTCGCTATTTGTTACGGGTGTGAGCAGAACAAGTCTGTGGTTCAGCAAGAGCTAAGTACAGATATGCTTCTCTATTTGTTAAGGTCTTGTAGAAATGTCATACCTGCCCACCGATTGGATTCAGCCATCGATAGTTTACCAGCTGACAATTTGAGTGAATGTAATCAACAAGGCCCTGAATTTAGGAAACACCAAATGGATAGTCCCATAAGATCTACTCGTTGTGTTGGCCGAACTACTAAGGTTTGCTTGGGGAAGCCAGGTTATTTGGGAAATAGCGTTAGGATTGGGAGAGCAAGAAATTTAAAAGACAACAAGATAACTAAACCCACGGAAGAAATGGCTTTCAAGCACAATCAACCAGTTTCAGATTTTGCCAAGGTTATGTTGCATTATAGATTCACCTGCAGCTTCATTGATAGAGCAGAGCAGTTCTTTGCAGCCGGGATTCCTATTGAAGTGAATGAATAG 5010 41.62 MEKSSDGGDDHSSGWLEVRKRHRNSSKFSLQSSDGEISGKNSSKCQSIQNSLGKHAGRENCRSHPSKSGKSNAVHFNDVAGNSLPLPNEDKKCSHYLDKLVIRQDGSTKPSPAFVTNSLGESGDCDKNFKSDKLQVVHKIKWGHLEDADLLLNDNGLEAGIKFGDIEGANVVCSRKQEDSPDVGLSINPNLSLSLDSVPRQTVLTTQRDDLCDDNSREVNEISSECVELQVKSKVNVDPDHNSNSEVINTEDDKHVNDCFVRNSPLIEEAVKFQVLTEVDDSEISNAMKKNGISRSSLTAHDTELVPAKRVEFEASSKSIYSVEEVQIPEAGAKHDDAPNTNLGSALGEGETAESKERFRQRLWCFLFENLNRAVDELYLLCELECDVEQMKEAVLVLEEAAFDFRELNGRVEEFEKVKKSSLLAVADGVLPITLKGDHRRPHALSWEVRRMTTSSHRAEILSSSLEAFKKIRQERAIDHTSNDTNIQGPEPLSLEPFAETNSSVVTHDAPSAKDSVTKSNLESRDLNITLGVQSGEGRKIESTRFRKMNLAQNGRPSPPFSVNSSKPPVAGKCKKEQLELDVEKLLPRREKVRTENNSDKIQKSTDQFKKVTVFPEKDKEKERRNTAPWKSMDAWKEKRNWEDILSSSSRGTARVSHSPGMNRKSAERARVLHDKLMSPEKKKKTAVDLKREAEEKHARAMKIRSELENERVQKLQRTSEKLNRVNEWQAVRTMKLREGMFARQQRSESRHEAFLAQVVKRAGDESSKVNEVRFITSLNEENKKIILRQKLHGSELRRAEKLQVMKTKQKEDMAREEAVLERRKLIEAEKLQRLAETQRKKEEAHGRREEERKASSAAREARALEQIRRKEERAKAQQEEAELLAQKLAERLSESEQRRKFYLEQIRERASMDFRDQASPLMRRSVNKDGQGRSPPANSGEDRQPSNSDFVGTSSVVDNAVLQNSVKRKIKRIRQRLMALKYEFIEPSISAENVGIGYRTAVGTARVKVGRWLQELQRLRQARKEGAASIGLIIADMIKFLDGKDPELQASRQAGLLDFIASALPASHTSKPEACQVTIHLLRLLRVVLSVPANRSYFLAQNLLPPIIPMLSAALENYIKIAASINAPGNLNISSSKTSIENFESISEVVDGFLWTVSTIMDHISFEERQIQMWDGLLELLITYQVIHRLRDLFALYDRPQVEGSPFPSSILLSVNLLVVLTSRPGMSRSINWELLPIETIQKVELADLSDSKVSHVTEPNGDCEPPSPHISYAGGAYISDVAADSLASEDTLADSKMEQTVSSGELNAVQNDILTEVEKGKEIQKPLIPQRYEDGGVNYVTEQKVEMNLEQPVAILLSSMSDTGLVSLTSLLTAVLLQANNRLSSEQGSYVLPSNFEEVAVCVLKVLNHLALLDLKFMQRMLARSDLRMEFFHLMSFLLSHCTSKWKDAKDQIGLLLLESLLLLAHFALFHPGNQAVLRWGKSPTILHKVCDLPFVFFSDSELMPVLGSTLVAICYGCEQNKSVVQQELSTDMLLYLLRSCRNVIPAHRLDSAIDSLPADNLSECNQQGPEFRKHQMDSPIRSTRCVGRTTKVCLGKPGYLGNSVRIGRARNLKDNKITKPTEEMAFKHNQPVSDFAKVMLHYRFTCSFIDRAEQFFAAGIPIEVNE 1669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7583751 7592149 + Bda023790.1 Bda06g00532 8114

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00532 1669 MobiDBLite consensus disorder prediction 1 24 - -
Bda06g00532 1669 MobiDBLite consensus disorder prediction 932 951 - -
Bda06g00532 1669 MobiDBLite consensus disorder prediction 1 84 - -
Bda06g00532 1669 PANTHER S PHASE CYCLIN A-ASSOCIATED PROTEIN IN THE ENDOPLASMIC RETICULUM 25 1661 - -
Bda06g00532 1669 MobiDBLite consensus disorder prediction 914 951 - -
Bda06g00532 1669 MobiDBLite consensus disorder prediction 28 56 - -
Bda06g00532 1669 Coils Coil 691 711 - -
Bda06g00532 1669 Coils Coil 835 906 - -
Bda06g00532 1669 Pfam S phase cyclin A-associated protein in the endoplasmic reticulum 353 455 IPR032446 -
Bda06g00532 1669 MobiDBLite consensus disorder prediction 551 575 - -
Bda06g00532 1669 MobiDBLite consensus disorder prediction 330 351 - -
Bda06g00532 1669 MobiDBLite consensus disorder prediction 837 863 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00532 K24869 SCAPER; S phase cyclin A-associated protein in the endoplasmic reticulum - qsu:111994725 1842.01
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g620 . . Bda06g00532 . . . . Bma12g00976 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo15g00327 . . Bpe07g00766 . . . . Cmo10g00171 . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007144 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7 1 35