Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00542 ATGGCGACGGTCACTGCCCAAGCTTCTACTCCGGTTTGCCAGCTATCCACTTCAAAATCGAGATTCTTAACCGGCAAGTCCAGTAAATTGAACAGAGAGATTTCTGTTAGATCGTCGAGTTCTCCGGTTACTTCTTTCAAAGTCGAGGCTAAGAAAGGAGAATGGCTGCCGGGTTTGCCCTCCCCCGTTTACCTCACCGGAAGTCTTCCCGGCGACAATGGGTTTGACCCACTTGCTCTAGCAGAGGACCCAGAGAATCTCCGGTGGTTCGTCCAAGCCGAACTTGTCAATGGCAGGTGGGCAATGCTGGGTGTGGCCGGAATGTTGCTGCCGGAAATGTTGACCAAGATCGGAATCCTCAACGTACCGAAGTGGTACGACGCCGGAAAATCCGAATACTTCGCATCGTATTCCACTCTTTTTGTGATCGAGTTCATCTTGTTTCACTACGTCGAGATAAGAAGATGGCAAGATATTAAAAACCCAGGAAGTGTAAATCAAGATCCTATCTTCAAGCAGTACAGCTTGCCGCCGAACGATGTTGGGTATCCCGGCGGCATTTTCAATCCTCTCAACTTCGCCGCAACCCTCGAAGCCAAAGAGAAGGAAATTGCCAATGGGAGATTGGCGATGTTGGCATTTTTAGGGTTTGTGATTCAGCACAACGTGACAGGACAAGGGCCATTCGACAACCTTTTACAGCACCTGTCGGATCCATGGCACAACACCATTATCCAGACTCTTGGTCAGTAG 753 49.54 MATVTAQASTPVCQLSTSKSRFLTGKSSKLNREISVRSSSSPVTSFKVEAKKGEWLPGLPSPVYLTGSLPGDNGFDPLALAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEMLTKIGILNVPKWYDAGKSEYFASYSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAATLEAKEKEIANGRLAMLAFLGFVIQHNVTGQGPFDNLLQHLSDPWHNTIIQTLGQ 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7698513 7699410 + Bda023800.1 Bda06g00542 8124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00542 250 Pfam Chlorophyll A-B binding protein 62 221 IPR022796 -
Bda06g00542 250 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 248 - -
Bda06g00542 250 SUPERFAMILY Chlorophyll a-b binding protein 52 248 - -
Bda06g00542 250 Gene3D Chlorophyll a/b binding protein domain 62 241 - -
Bda06g00542 250 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 248 IPR001344 GO:0009765|GO:0016020
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00542 Bda15g00608 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01535 Bda-Chr3:54300923 Bda06g00542 Bda-Chr6:7698513 2.75E-73 dispersed
Bda05g01028 Bda-Chr5:58739367 Bda06g00542 Bda-Chr6:7698513 7.09E-74 dispersed
Bda06g00542 Bda-Chr6:7698513 Bda09g00283 Bda-Chr9:3508116 8.45E-49 dispersed
Bda15g00608 Bda-Chr15:9272694 Bda06g00542 Bda-Chr6:7698513 7.27E-162 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00542 K08910 - rcu:8263414 436.417