Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00547 ATGGTAGGAGAAGACGAGCTCCACCACCACCATCGCCACCATAACCACCACCGCCCGACTTTCCCGTTTCAGTTACTGGAAAAGAAAGACGACGAAGCTTCCTGCTCTAGCTCCGCCTACCCTTCTATAGCCATTTCCGCAGATCCGCCTACCTCCTCCACCCGTTTACAAGTCACTGTCGCCACATCTGCGGAGCCCTCCAAGAAGCCTCCGCCGAAGAGAACCTCCACAAAGGACCGCCACACTAAGGTCGATGGCCGCGGCCGTCGCATTAGAATGCCGGCTCTTTGCGCCGCGAGAGTTTTTCAGCTCACCCGCGAGCTCGGCCACAAGTCCGACGGCGAAACAATCGAGTGGCTCCTCCAACAAGCGGAGCCCGCCGTCATCGCCGCAACCGGAACCGGAACAATACCGGCGAACTTCACTTCACTTAATATATCATTAAGAAGCTCCGGCTCAAGCATGTCCGTGCCATCTCAGCTTAGATCAGCTTCCTACTATAACCCGAATTTCTCCCTTCAGCAACCTAGAAGAAGCTTTTTTCCAGGAATAGGGTTGTCGCCGGAAAGCACATCGACGTTACTGAATTTCCAGTCAAACAGTCAGGGTTCTATGCTGCAAGCAAAGCAAGAACTGAGAGACACTACACTAGACCTATCAGAGGGAGACGAAGGAATCGGGCGGAAGAGAAGATCGGAGGAAGATTTATCGACGCAGCATCAAATGGGAAGTTATTTCCTGCCGTCGACAGCAGCAGCAGCTATTCCAGCTACGCACGGAGCCCAAATTCCAGCCAATTTCTGGATGCTTGCTAATCTCAATAACCAAGTAATGAGTGGCGACCCAATTTGGACATTTCCTTCGGTTAATAGTAGTGGTTTGTATCGGGGAACCGTGTCTAGTGGGTTACATTTCATGAATTTTTCAGCCCCTGTGACAATATTGCCCGGCCAGCAATTTGGGTCAGCAATCGGAATATCCGGCAACAGTGGTGGTCCGAGCGAGGAACATTGGCTAAACTCGTATCGATCAATGCAAAATTCGGACATGTTGGAATCGCCCAGGACTCGGTCTCAATCACACCACGGAGCCAGTGGCAGCGGTGGAGGCGATGATCGGCACGACTCGACTAGTCACCAATTGTGA 1146 52.27 MVGEDELHHHHRHHNHHRPTFPFQLLEKKDDEASCSSSAYPSIAISADPPTSSTRLQVTVATSAEPSKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSSMSVPSQLRSASYYNPNFSLQQPRRSFFPGIGLSPESTSTLLNFQSNSQGSMLQAKQELRDTTLDLSEGDEGIGRKRRSEEDLSTQHQMGSYFLPSTAAAAIPATHGAQIPANFWMLANLNNQVMSGDPIWTFPSVNSSGLYRGTVSSGLHFMNFSAPVTILPGQQFGSAIGISGNSGGPSEEHWLNSYRSMQNSDMLESPRTRSQSHHGASGSGGGDDRHDSTSHQL 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7746366 7747511 + Bda023805.1 Bda06g00547 8129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00547 381 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 12 380 IPR005333 GO:0003700
Bda06g00547 381 MobiDBLite consensus disorder prediction 61 85 - -
Bda06g00547 381 Pfam TCP family transcription factor 75 241 IPR017887 -
Bda06g00547 381 MobiDBLite consensus disorder prediction 367 381 - -
Bda06g00547 381 MobiDBLite consensus disorder prediction 220 239 - -
Bda06g00547 381 MobiDBLite consensus disorder prediction 71 85 - -
Bda06g00547 381 MobiDBLite consensus disorder prediction 1 21 - -
Bda06g00547 381 MobiDBLite consensus disorder prediction 347 365 - -
Bda06g00547 381 MobiDBLite consensus disorder prediction 347 381 - -
Bda06g00547 381 ProSiteProfiles TCP domain profile. 77 131 IPR017887 -
Bda06g00547 381 MobiDBLite consensus disorder prediction 220 237 - -
Bda06g00547 381 PANTHER TRANSCRIPTION FACTOR TCP14-LIKE 12 380 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00547 Bda14g00846 CCT
Bda06g00547 Bda14g00846 ECH
Bda06g00547 Bda15g00599 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00547 Bda-Chr6:7746366 Bda10g00932 Bda-Chr10:43698140 1.47E-45 dispersed
Bda11g01222 Bda-Chr11:12583633 Bda06g00547 Bda-Chr6:7746366 5.76E-89 wgd
Bda14g00846 Bda-Chr14:6520571 Bda06g00547 Bda-Chr6:7746366 5.10E-101 wgd
Bda15g00574 Bda-Chr15:8942924 Bda06g00547 Bda-Chr6:7746366 0 wgd
Bda15g00599 Bda-Chr15:9200301 Bda06g00547 Bda-Chr6:7746366 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16016 PF03634 TCP 3.70E-40 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00547 - - csv:101221049 457.988