Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda06g00552 | ATGGAGGCTTCTTCTAGGTCTGCAGACGTCGCCGCCATCAAACAGGAATCTGAGAGAGATAAGTCCAGTGATGGGGATGAAGATTTTAATCGTGAGGGCTTTACCAAGGTCCCGATTGTGACAGAAGGGGAAAGATCTACAATGGAACTCGACGTAGTGACATCTTCCTCGAGTCGAAATGATCAGGACGAGGAGCTTGAATCAGCGAGAGCTGAAATGGGAGAGGTGAGAGAAGAAAATCAACGGTTGAAAATGTGCTTAGATCTAATAATGAAGGATTACAGGACGCTCCAAATGCAGTTTGATGACATTGTTCAGCAAAATGGAAAGAAGAAAAAGCAAAGAGCTGAGACGGATCGAGAAGTTGAAGAAACCGAGCTCATTTCGCTTACTCTCGGAAGATTTCCTAGCGAAGAAAAGAAGATTAACGAAAGCACCATAAATTCTCATCAATTGATCAAAGAAAATGATCAACAGATTGCACAACAGGACTTAACTCTTGGGTTAGATTGCCAAGCTAATGGTTCTAGGTTAAGTGATCAGATGAAGGCGCTTTCGCCTAAAGATCGAAGCCCGAGTTTGAACAGTGTCGAAGAGATAAAGGAAGGAGAAGGTGAAGAGCCATGGCTACCTAGTAAGGGTTTGAAGACAATGAGAAGTGGACAAGACGATGTAGTGCAGCAGAATCCACCCAAGAAAGCTAGGGTTTGTGTGAGGGCTCGTTGTGATACACCCACGATGAATGATGGGTGTCAATGGAGGAAATATGGGCAGAAGATAGCAAAAGGAAACCCATGCCCTAGAGCTTATTATCGTTGCACTGGAGCTCCTTCATGTCCAGTGAGGAAACAGGTTCAAAGATGTGCTGAGGAAATGTCCATTTTAATCACAACCTACGAAGGAACACACAACCACCCTCTCTCCGTCTCAGCCACCGCCATGGCTTCCACCACTTCGGCGGCGGCAGCAATGCTATTATCTGGTTCATCGAGCTCACGATCCAGCCCTAACCCAGCAACAGCGACAGCCATCACAGCTCCAGCCAACCTCCATGGAATGAACTTCTATCTTTCCGACGGTTCAAATTCAAAACAATTTTTCTTACCCAATTCTTCCATATCATCTTCCTCGCCCACACACCCGACGATCACTCTAGACCTAACTTTGAACCCATCGTCTTCTTCCTCCTCCTCCCATTTTAGCAGACTGTATCCTCCCAGATATCCTTTCACAAGCCTGGATTTTGCTTCTTCTCAATCCAACGTTATGTCTTGGAGTAATGGCCTTCTTGGCTATGGAAATCAACCGCCTTACAATAGAAGCCAAATGGGACCTCTTGAAATCGGAGGAATAGCCTTACAAAATAATATCTACAAAAATTTTATGCAAAAGCCTGACAACTCACCGGTGCCGGCGCCACGACACCCTCTTCCAGACACGATTGCCGCCGCTACTAAGGCAATTACTTCAGACCCTAGTTTCCAATCTGTCTTAGCAGCTGCTTTGACGTCATTTGTCGGAAACGGTGGTGGTGGTAGCGGCGGAGGAGGTGGCAGTGAAAATTTTTCGGAGAAATTAAAGTGGACGGAGAATTTTCCATTATCGACCTCTAACCAAAAAGGAAACGGGTGCGGATCGAGCTTCATCAACACAGCGCCAACGAAAAATTCTCAGCCTGCAAACTTGATGTTCTTACCGCCAAATTCGTCGCCATTTTCGAGCTCCAAAAGTGCATCTACATCTCCTGGAGATAACAGAGACCACCAACCTAGTTTATAA | 1779 | 45.81 | MEASSRSADVAAIKQESERDKSSDGDEDFNREGFTKVPIVTEGERSTMELDVVTSSSSRNDQDEELESARAEMGEVREENQRLKMCLDLIMKDYRTLQMQFDDIVQQNGKKKKQRAETDREVEETELISLTLGRFPSEEKKINESTINSHQLIKENDQQIAQQDLTLGLDCQANGSRLSDQMKALSPKDRSPSLNSVEEIKEGEGEEPWLPSKGLKTMRSGQDDVVQQNPPKKARVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTGAPSCPVRKQVQRCAEEMSILITTYEGTHNHPLSVSATAMASTTSAAAAMLLSGSSSSRSSPNPATATAITAPANLHGMNFYLSDGSNSKQFFLPNSSISSSSPTHPTITLDLTLNPSSSSSSSHFSRLYPPRYPFTSLDFASSQSNVMSWSNGLLGYGNQPPYNRSQMGPLEIGGIALQNNIYKNFMQKPDNSPVPAPRHPLPDTIAAATKAITSDPSFQSVLAAALTSFVGNGGGGSGGGGGSENFSEKLKWTENFPLSTSNQKGNGCGSSFINTAPTKNSQPANLMFLPPNSSPFSSSKSASTSPGDNRDHQPSL | 592 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 7798195 | 7801743 | - | Bda023812.1 | Bda06g00552 | 8134 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda06g00552 | 592 | MobiDBLite | consensus disorder prediction | 181 | 207 | - | - | |
Bda06g00552 | 592 | MobiDBLite | consensus disorder prediction | 12 | 33 | - | - | |
Bda06g00552 | 592 | MobiDBLite | consensus disorder prediction | 58 | 75 | - | - | |
Bda06g00552 | 592 | MobiDBLite | consensus disorder prediction | 1 | 75 | - | - | |
Bda06g00552 | 592 | Pfam | WRKY DNA -binding domain | 248 | 306 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda06g00552 | 592 | Gene3D | WRKY domain | 232 | 308 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda06g00552 | 592 | Coils | Coil | 59 | 86 | - | - | |
Bda06g00552 | 592 | SUPERFAMILY | WRKY DNA-binding domain | 240 | 307 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda06g00552 | 592 | ProSiteProfiles | WRKY domain profile. | 242 | 308 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda06g00552 | 592 | SMART | WRKY_cls | 247 | 307 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda06g00552 | 592 | MobiDBLite | consensus disorder prediction | 533 | 592 | - | - | |
Bda06g00552 | 592 | PANTHER | WRKY TRANSCRIPTION FACTOR 61-RELATED | 45 | 586 | - | - | |
Bda06g00552 | 592 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 45 | 586 | IPR044810 | GO:0003700 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda06g00552 | Bda11g01690 | CCT | |
Bda06g00552 | Bda14g00841 | CCT | |
Bda06g00552 | Bda11g01690 | ECH | |
Bda06g00552 | Bda14g00841 | ECH | |
Bda06g00552 | Bda15g00578 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda06g00552 | Bda-Chr6:7798195 | Bda15g00953 | Bda-Chr15:17560389 | 5.23E-55 | dispersed | |
Bda11g01690 | Bda-Chr11:51041601 | Bda06g00552 | Bda-Chr6:7798195 | 8.27E-89 | wgd | |
Bda14g00841 | Bda-Chr14:6479186 | Bda06g00552 | Bda-Chr6:7798195 | 2.12E-81 | wgd | |
Bda15g00578 | Bda-Chr15:9002564 | Bda06g00552 | Bda-Chr6:7798195 | 0 | wgd | |
Bda15g00595 | Bda-Chr15:9149910 | Bda06g00552 | Bda-Chr6:7798195 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16018 | PF03106 | WRKY | 1.60E-23 | CL0274 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda06g00552 | - | - | tcc:18604620 | 526.939 |