Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda06g00557 | ATGACTCTTAAAGGCGGCACCAGCCAAGCCTGCGCCGCATGCAAATACCAGAGGAGAAAGTGCAAGGCCGATTGTCCTCTCGCTCCATTTTTCCCCCCGGACCAACCCAAACTCTTTCAGAATGCGCACAATCTTTTCGGCGTCAGAAACATCTTGAACATCCTCAAGAACTTGGACCACGACCAGAAGTCCGAGGCCATGCGCTCCATCATCTACCAATCCAACATGCGCGACAGGTTTCCGGTCAATGGCTGCTGGGAGGTCATCTGTTATCTCCGGTACCAGTTGCAGGCCGTCGAAGAAGAGTTTCACGGCGTCCTGTCTCAGCTAGAGATGCATAGACAGCATCAGTTTGAAGAAGATCTTACTTCTCAGCTCGAGCTTGGAATGGGTCCACCCACTAATTCTATCGCACTTTTGAATCAATCTACTGTAATTCCAGCACAAAATGAAGCTAATTACAACCCTATTTACTTTGATTTTAAAGAGAGTTTTGCAAATCCTTCGTGGGTTCCACACCCTTTTGCTGATAATAACTTATTTCCTGTCCAAGAAAAAGTTCAAAACTATGATGAAATGCAGCCTTTTTTCGACACCATGGATGATAGGCACTCGTATATTGATTCTAATGAGTCTAGGTAA | 642 | 45.79 | MTLKGGTSQACAACKYQRRKCKADCPLAPFFPPDQPKLFQNAHNLFGVRNILNILKNLDHDQKSEAMRSIIYQSNMRDRFPVNGCWEVICYLRYQLQAVEEEFHGVLSQLEMHRQHQFEEDLTSQLELGMGPPTNSIALLNQSTVIPAQNEANYNPIYFDFKESFANPSWVPHPFADNNLFPVQEKVQNYDEMQPFFDTMDDRHSYIDSNESR | 213 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 7837306 | 7837947 | + | Bda023818.1 | Bda06g00557 | 8139 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda06g00557 | 213 | ProSiteProfiles | LOB domain profile. | 9 | 110 | IPR004883 | - | |
| Bda06g00557 | 213 | Pfam | Lateral organ boundaries (LOB) domain | 10 | 104 | IPR004883 | - | |
| Bda06g00557 | 213 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 7 | 191 | - | - | |
| Bda06g00557 | 213 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 27-RELATED | 7 | 191 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bda06g00557 | Bda15g00586 | BCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda06g00557 | Bda-Chr6:7837306 | Bda14g00187 | Bda-Chr14:1337488 | 2.56E-26 | dispersed | |
| Bda15g00586 | Bda-Chr15:9068803 | Bda06g00557 | Bda-Chr6:7837306 | 2.16E-120 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 16019 | PF03195 | LOB | 5.60E-33 | No_clan | Bda | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda06g00557 | - | - | mesc:110617644 | 263.077 |