Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00558 ATGCTCGCTTTGTTGCCTACGTGTCTGTCTCTCTCTCTCATGTGTCTGGTGAGAATTGACAAATCAAATAGTGTTAATGAGAAGAAGCACTTAAATGGTTTTTCTGCTAATGCCTTAATCATTGCTGGCTATCTCATGGTGATAATAATATTGCAAAACATCATTACTTTACCATTTTGGGCGAGTCTTTTGACGTTCATCAATCTCTTGGGTCTGCTTGCTTTACCTCTTGGAATTGGAATTAATGCTAGGAGGGAACAGTTAAACAGATCTTTACTCTCATTATCCATCAATCAAAATCCTCTGATGGACAGCTTGGAGCCAATGCCATCCTCCAAGTTTCCTAATGCAGAGAGTTCTGTAAAATATCACGAGCTGCCTTCTGATGAGGGTAAAATGACGGATAGTATAAGTGACAAAATGCCAACCGATGAAGAGGGTATGAATATCTTGCAAGCCATGCGGTCGGTAAATTTTTGGCTATTGTCTCTTGCCATGGTGTGCGGAATGGGGTCTGGTCTGGCAACAATAAACAACATGAGCCAAATTGGCCAATCTCTTGGTTACAGCACGGTAGAGATTAATACTTTTGTTTCCTTGTGGAGTATATGGAATTTTCTCGGCCGTTTCGGGGCTGGTTTTCTGTCAGATTACCTTTTGCACACTGCAGGGTGGGCAAGGCCATTGTTAATGGCGATAACTTTAGCCACTATGAGTGTAGGACACTTAATCATCGCATCTGGAATTTCAGGAACTTTATACATCGGTTCGGTCCTCGTGGGTATTTGCTATGGTTCACAGTGGTCCCTTATGCCCACCATCACTTCAGAGATATTTGGGATGGAGCATATGGGCACCATTTTCAACACCATAGCTGTGGCAAGTCCCATGGGATCGTACATCTTTTCAGTAAGAGTGATTGGATATATTTACGATAAAGAAGCCGCTGAAGCGGATAATACTTGCTCGGGTAGTCACTGCTTTATGCTGTCTTTCATTGTCATGGCGTCTGTTGCTCTGTGTGGGTGTTTTGTTGCCGTTGCTCTGTTATATCGAACTAGGCGATTGTATCAGCTGATTGTGCTTAGAAGATTTAAGAAATCTCCCAGACAATGA 1116 42.56 MLALLPTCLSLSLMCLVRIDKSNSVNEKKHLNGFSANALIIAGYLMVIIILQNIITLPFWASLLTFINLLGLLALPLGIGINARREQLNRSLLSLSINQNPLMDSLEPMPSSKFPNAESSVKYHELPSDEGKMTDSISDKMPTDEEGMNILQAMRSVNFWLLSLAMVCGMGSGLATINNMSQIGQSLGYSTVEINTFVSLWSIWNFLGRFGAGFLSDYLLHTAGWARPLLMAITLATMSVGHLIIASGISGTLYIGSVLVGICYGSQWSLMPTITSEIFGMEHMGTIFNTIAVASPMGSYIFSVRVIGYIYDKEAAEADNTCSGSHCFMLSFIVMASVALCGCFVAVALLYRTRRLYQLIVLRRFKKSPRQ 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7869470 7870585 + Bda023820.2 Bda06g00558 8140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00558 371 SUPERFAMILY MFS general substrate transporter 38 356 IPR036259 -
Bda06g00558 371 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 368 - -
Bda06g00558 371 PANTHER F25A4.25 PROTEIN 1 368 - -
Bda06g00558 371 Gene3D MFS general substrate transporter like domains 149 359 IPR036259 -
Bda06g00558 371 Pfam Major Facilitator Superfamily 162 353 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00558 Bda-Chr6:7869470 Bda15g00152 Bda-Chr15:4092889 1.18E-59 dispersed
Bda06g00558 Bda-Chr6:7869470 Bda14g00054 Bda-Chr14:452675 2.49E-62 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00558 - - qsu:112039582 490.345