Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00575 ATGGCGATTCAGATACCCAGTAGACAGCTTTTCATCGATGGAGAATGGAGGGAACCAGTTCTTAAGAAACGCATCCCCATCATCAATCCTGCTACAGAAGAAATTATCGGTCTTTTTCCGGCTAAATTTTTAAGTTTGTTTTGTGAATCTATGATTTGTGCTTTAGGGGATATCCCTGCAGCTACTGCGGAGGATGTAGAGCTAGCTGTAAACGCAGCTAGAAGAGCCCTCGACAAGAAAAAGGGGGGTGAATGGGCCTCTTCTTCCGGTGCTTTTCGTGCAAAGTATTTACGCTCCATTGCTGCCAAGGTAGTGGAGAAGAAATCCAGATTGGCAAAGCTTGAAGCAATTGATGGTGGAAAACCTTTGGATGAAGCTGCATGGGATATGGATGATGTGGCCGGGTGTTTTGAGTACTACGCAGACCTTGCTGAAGCCTTGGATGCTAAGCAGAAGACACCACTTTCTATCCCTATGGATACATTCAAGAGCTATGTTCTTAAGGAACCCATTGGAGTGGTTGGGTTGATTACTCCATGGAATTACCCTCTACTGATGGCTACATGGAAAGTGGCTCCTGCATTGGCTGCTGGATGTGCTGCGATACTCAAGCCATCCGAACTTGCTTCCGTGACTTGTTTGGAGCTGGCTGAAATATGTAGCAGTATTGGCCTTCCTCCTGGTGTTCTCAATGTTTTGACTGGTTATGGTCCCCAAGCTGGTGCTCCTCTGGCTAAGCATCCGCATGTTGACAAGATAGCATTTACAGGCAGCACGCTTACAGGGAGCAAGATAATGGCATCTGCAGCTCAAGTGGTCAAGCCTGTTTCACTTGAGCTTGGTGGAAAAAGTCCAATTATCGTTTTTGAGGACGTTGACTTGGAGAAAGCTGCCGAATGGACAGCTTTCGGTTGCTTTTGGACAAATGGTCAGATTTGCAGTGCAACATCGCGTCTTCTTATACATGAAAGTATTGCCAGTGAATTTTTGGAGAAGCTGGTACAGTTGTGCCGAAACATTAAAATATCAGATCCCTTGGAAGATGGTTGTCGGCTTGGCCCTGTCGTTAATGGAGGGCAGTACGAGAAAATATTGAAGTTCATCTCAACTGCCAAGAGTGAAGGAGCAACTATTCTCTCCGGCGGGGGTCGTCCTCAGCATCTCAAGAAAGGGTTCTTTATTGAACCGACCATCATAACCAACGTGACGACATCTATGCAAATCTGGAGAGAAGAAGTTTTTGGACCAGTAATTTGTGTCAAAACGTTCAGAACCGAAGACGAAGCAATTGAACTAGCAAATGATAGCCAATATGGATTAGGTTCTGCTGTAATCTCAAATGATCTAGAAAGGTGTGATCGTATCTCAAAGGCTTTCGAGTCAGGTATGGTATGGATCAATTGCTCCCAACCGTGTTTCTGTCAAGCCCCGTGGGGAGGCACCAAGCGTAGCGGCTTCGGTCGTGAATTAGGCGAATGGGGACTTGATAATTATCTGAGCGTGAAGCAGGTTACACAGTACGTCTCCAACGAGCCATGGGGGTGGTATCAAGCTCCTTCAAAACTATGA 1569 46.08 MAIQIPSRQLFIDGEWREPVLKKRIPIINPATEEIIGLFPAKFLSLFCESMICALGDIPAATAEDVELAVNAARRALDKKKGGEWASSSGAFRAKYLRSIAAKVVEKKSRLAKLEAIDGGKPLDEAAWDMDDVAGCFEYYADLAEALDAKQKTPLSIPMDTFKSYVLKEPIGVVGLITPWNYPLLMATWKVAPALAAGCAAILKPSELASVTCLELAEICSSIGLPPGVLNVLTGYGPQAGAPLAKHPHVDKIAFTGSTLTGSKIMASAAQVVKPVSLELGGKSPIIVFEDVDLEKAAEWTAFGCFWTNGQICSATSRLLIHESIASEFLEKLVQLCRNIKISDPLEDGCRLGPVVNGGQYEKILKFISTAKSEGATILSGGGRPQHLKKGFFIEPTIITNVTTSMQIWREEVFGPVICVKTFRTEDEAIELANDSQYGLGSAVISNDLERCDRISKAFESGMVWINCSQPCFCQAPWGGTKRSGFGRELGEWGLDNYLSVKQVTQYVSNEPWGWYQAPSKL 522
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8003042 8007236 - Bda023837.1 Bda06g00575 8157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00575 522 Pfam Aldehyde dehydrogenase family 55 504 IPR015590 GO:0016491
Bda06g00575 522 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1, CHLOROPLASTIC 55 519 - -
Bda06g00575 522 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1, CHLOROPLASTIC 1 41 - -
Bda06g00575 522 SUPERFAMILY ALDH-like 5 509 IPR016161 GO:0016491
Bda06g00575 522 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 55 502 IPR016162 GO:0016491
Bda06g00575 522 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 278 285 IPR029510 GO:0016491
Bda06g00575 522 CDD ALDH_F10_BADH 27 506 - -
Bda06g00575 522 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 306 317 IPR016160 GO:0016491
Bda06g00575 522 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 286 477 IPR016163 GO:0016620
Bda06g00575 522 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 55 519 - -
Bda06g00575 522 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1 41 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00575 Bda-Chr6:8003042 Bda11g00121 Bda-Chr11:1644231 9.41E-120 dispersed
Bda11g01689 Bda-Chr11:51030869 Bda06g00575 Bda-Chr6:8003042 6.46E-12 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00575 K00130 - qsu:112020174 879.011