Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00589 ATGAAGGAAAACGGGGATGGGTTTGTGAGGGCAGATCAGATTGATCTGAAGAGCTTGGATGAGCAGCTGGAGAGGCATCTAAACAGAGCCTGGACGATGGAGAAGATCAGGAAGAAAGACGAAGATGGAAATGGTGTTTCGACTACCGAAACGGGTCTCAGAAAAGGGGCGAAAATGGGGGCGAAGAAGGAGAGGCAAGACTGGGAAATTGACCCATCGAAGTTGATAATCAAGAGCGTCATTGCTCGTGGCACTTTTGGCACCGTCCACCGCGGTTTCTACGACGGCCAAGATGTCGCCGTTAAATTGCTTGAGTGGGGAGAAGAAGGTCACAGGACTGAATCCGAGATTACAGCTCTAAGAGCAGCATTCCAACAAGAAGTTGCTGTTTGGCATAAACTCGATCATCCTAACGTAACGAAGTTTATAGGGGCAACAATGGGGTCATCTGAATTACAGATTCAAACCGAAAACGGTCAAATTGCTATGCCGAGTAATGTATGTTGTGTTGTAGTGGAATATCTTCCTGGTGGTGCTCTCAAATCTTACCTCATAAAAAACCGGAGGAAGAAGCTACCTTTTAAGGTTGTCGTCCAGCTAGCGCTTGATCTTGCTCGAGGGTATTGCCTTTTCTACTCCCAAAATCTGAGGCCGGAAATCCCAAGATGTTGTCCGAGTTCTCTAGCTAACGTGATGAAACGATGCTGGGATGCCAACCCGGATAAGAGGCCGGAGATGGACGAAGTGGTTTCGATGATTGAAGCCATTGATACGTCAAAAGGTGGAGGTATGATCCCGGTGGATCAGTCTCAGGGCTGTTTCTGCTTCCGAAAATATCGAGGTCCCTGA 849 47.82 MKENGDGFVRADQIDLKSLDEQLERHLNRAWTMEKIRKKDEDGNGVSTTETGLRKGAKMGAKKERQDWEIDPSKLIIKSVIARGTFGTVHRGFYDGQDVAVKLLEWGEEGHRTESEITALRAAFQQEVAVWHKLDHPNVTKFIGATMGSSELQIQTENGQIAMPSNVCCVVVEYLPGGALKSYLIKNRRKKLPFKVVVQLALDLARGYCLFYSQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMIEAIDTSKGGGMIPVDQSQGCFCFRKYRGP 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8123710 8126731 - Bda023853.1 Bda06g00589 8171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00589 282 Gene3D Phosphorylase Kinase; domain 1 64 159 - -
Bda06g00589 282 ProSiteProfiles Protein kinase domain profile. 75 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g00589 282 Pfam Protein tyrosine and serine/threonine kinase 77 209 IPR001245 GO:0004672|GO:0006468
Bda06g00589 282 Pfam Protein tyrosine and serine/threonine kinase 213 252 IPR001245 GO:0004672|GO:0006468
Bda06g00589 282 PANTHER - 1 214 - -
Bda06g00589 282 MobiDBLite consensus disorder prediction 40 64 - -
Bda06g00589 282 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 213 276 - -
Bda06g00589 282 Gene3D Transferase(Phosphotransferase) domain 1 208 262 - -
Bda06g00589 282 SUPERFAMILY Protein kinase-like (PK-like) 65 252 IPR011009 -
Bda06g00589 282 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 214 - -
Bda06g00589 282 PANTHER - 213 276 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00589 Bda-Chr6:8123710 Bda13g01658 Bda-Chr13:40027030 8.49E-40 dispersed
Bda01g01271 Bda-Chr1:48131650 Bda06g00589 Bda-Chr6:8123710 1.34E-109 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69673 PF07714 PK_Tyr_Ser-Thr 5.40E-14 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00589 - - oeu:111380321 342.813