Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00602 ATGCAGAGCGCAGCCTTTAATTCGTCGCTTTCACTGCCTCTGCTGAAGCCTGTAAGGCATTTGAATCCTACCTCGGCAGCTGGATTCAGTTTCGTACGTTCCTATTCCGATTCGTCTAGCTGTAACGATCTCACCGCCTCTGCGAATGTCTCTCTATCTTCTTCTTCTTCTTCTTTGCCCCGCCGATCATGGTCTTTGTCGTCTTCTTCTTTTTCTTCTTCTTTATTTCCTAAATTTAGGCCTCGGTCCGGTATGACGTCGCTGCGTAATGACTCTGAGTTTAGTCGTTTCGAGGTGAGGGCTACCTCAGTGCCGGAGAGTGCTGGAGAGATCCAGGAATCAAGCAACTTGTTTAAGACGCTGGAGCTTGGAGCGTTGTTCGGCCTCTGGTATATCTCCAACATCTACTTCAATATCTACAATAAACAGGTGCTGAAGGTATATCCATTCCCTGTGACAGTCTCTGCAATTCAATTTGCTATTGGCACTGTGCTTGTGCTTTTTACGTGGGGTTTTAATATCTACAAGAAGCCGAAAGTCAGTGGCTCACAGCTTGCCGCTCTTCTGCCACTGGCAGTTGCTCACTTACTTGGAAACCTTTTTACCAACATGAGTCTTGATAAAGTGGCTGTATCATTTACCCACACAATCAAAGCTTCGGAGCCTTTCTTCTCAGTCATCCTGTCTGCTATATTTCTTGGGGAGTGGCCCACTCTATGGGTGTTTGCTTCCCTTATACCAATTGTTGGTGGTGTGGGATTGGCTTCAGCCACAGAGGCCTCATTTAATTGGTTTGGATTTTGGAGTGCAATGGCGTCCAATTTGACCAATCAATCCCGGAATGTCCTTAGCAAAAAGCTCATGATAAAAAAAGAGGATTCATTGGACAATATCACTCTCTTCTCGATAATTACAATCATGTCATTTATTTTGTTAGCTCCGGTGGCTATCTTCATGGAAGGTGTTAAATTTACTCCTGCCTATCTGCAGTCTGCAGGATTGAATGTTAGTCAAATATGCACTAGATCTCTTCTTGCTGCTTTGTGTTTCCATGCTTATCAACAGGTATCCTATATGATATTGCAGAGGGTATCTCCCGTCACACACTCGGTCGGAAATTGTGTGAAGCGGGTGGTGGTCATTGTGAGCTCTGTCATCTTCTTCCAAACACCTGTCTCCCCAATCAATACTCTTGGCACCGGAGTGGCTCTTGCCGGAGTTTTCCTTTATTCGAGGGTGAAACGCATTAAAGCGAAGCCCAAGACTGCGTAG 1272 45.44 MQSAAFNSSLSLPLLKPVRHLNPTSAAGFSFVRSYSDSSSCNDLTASANVSLSSSSSSLPRRSWSLSSSSFSSSLFPKFRPRSGMTSLRNDSEFSRFEVRATSVPESAGEIQESSNLFKTLELGALFGLWYISNIYFNIYNKQVLKVYPFPVTVSAIQFAIGTVLVLFTWGFNIYKKPKVSGSQLAALLPLAVAHLLGNLFTNMSLDKVAVSFTHTIKASEPFFSVILSAIFLGEWPTLWVFASLIPIVGGVGLASATEASFNWFGFWSAMASNLTNQSRNVLSKKLMIKKEDSLDNITLFSIITIMSFILLAPVAIFMEGVKFTPAYLQSAGLNVSQICTRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINTLGTGVALAGVFLYSRVKRIKAKPKTA 423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8222811 8225884 - Bda023867.1 Bda06g00602 8184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00602 423 PANTHER TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED 96 397 - -
Bda06g00602 423 SUPERFAMILY Multidrug resistance efflux transporter EmrE 166 256 - -
Bda06g00602 423 MobiDBLite consensus disorder prediction 51 70 - -
Bda06g00602 423 Pfam Triose-phosphate Transporter family 122 411 IPR004853 -
Bda06g00602 423 SUPERFAMILY Multidrug resistance efflux transporter EmrE 310 414 - -
Bda06g00602 423 PANTHER SOLUTE CARRIER FAMILY 35 96 397 - -
Bda06g00602 423 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 121 421 IPR004696 GO:0016021|GO:0022857|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00602 Bda11g01656 CCT
Bda06g00602 Bda11g01656 ECH
Bda06g00602 Bda15g00555 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00602 Bda-Chr6:8222811 Bda14g01165 Bda-Chr14:10982055 7.33E-159 dispersed
Bda06g00602 Bda-Chr6:8222811 Bda06g00605 Bda-Chr6:8242992 0 proximal
Bda11g01656 Bda-Chr11:50639562 Bda06g00602 Bda-Chr6:8222811 0 wgd
Bda15g00555 Bda-Chr15:8675523 Bda06g00602 Bda-Chr6:8222811 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00602 K15283 - csv:101203848 556.214