Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00605 ATGCAGAGCGCAGGCTTAAATTCGTCGCTTTCACTGCCTCTGCTGAAGCCTGTAAGGCATTTGAATCCTACCTCGGCAGCTGGATTCAGTTTCGTACGTTCCTATTCCGATTCGTCTAGCTGTAACGATCTCACCGCCTCTGCGAAAGTCTCTCTATCTTCTTCTTCTTCTTTGCCCCGCCGATCATGGTCTTTGTCGTCTTCTTCTTCTTCTTCTTTAGTTCCTAAATTTAGGCCTCGCTTCGGTATTACGTCGCTGCGTAATGACTCCGAGTTTAGTCGTTTCGAGGTGAGGGCTACCTCAGTGCCGGAGAGTGCTGGAGAGATCCAAGAATCAAGCAACTTGTTTAAGACGCTGGAGCTTGGAGCGTTGTTTGGGCTCTGGTATATCTCCAACATCTACTTCAATATCTACAATAAGCAGGTGCTGAAGGTATATCCATTCCCTGTAACAGTCTCTGCAATTCAATTTGCTATTGGCACTGTGCTTGTGCTTTTTACGTGGGGTTTTAATATCTACAAGAAGCCGAAAGTCAGTGGCTCACAGCTTGCCGCTCTTCTGCCACTGGCAGTTGCTCACTTACTTGGAAACCTTTTTACCAACATGAGTCTTGATAAAGTGGCTGTATCATTTACCCACACAATCAAAGCTTCGGAGCCTTTCTTCTCAGTCATCCTGTCTGCTATATTTCTTGGGGAGAGGCCCACTCTATGGGTGTTTGCTTCCCTTATACCAATTGTTGGTGGTGTGGGATTGGCTTCAGCCACAGAGGCCTCATTTAATTGGTTTGGATTTTGGAGTGCAATGGCGTCCAATTTGACCAATCAATCCCGGAATGTCCTTAGCAAAAAGCTCATGATAAAAAAAGAGGATTCATTGGACAATATCACTCTCTTCTCGATAATTACAATCATGTCATTTATTTTGTTAGCTCCGGTGGCTATCTTCATGGAAGGTGTTAAATTTACTCCTGCCTATCTGCAGTCTGCAGGATTGAATGTTAGTCAAATATGCACTAGATCTCTTCTTGCTGCTTTGTGTTTCCATGCTTATCAACAGGTATCGTATATGATATTGCAGAGGGTATCTCCCGTCACCCACTCGGTCGGAAATTGTGTGAAGCGGGTGGTGGTCATTGTGAGCTCTGTCATCTTCTTCCAAACACCTGTCTCCCCAATCAATACTCTTGGCACCGGAGTGGCTCTTGCCGGAGTTTTCCTTTATTCGAGGGTGAAACGCATTAAAGCGAAGCCCAAGACTGCGTAG 1266 45.5 MQSAGLNSSLSLPLLKPVRHLNPTSAAGFSFVRSYSDSSSCNDLTASAKVSLSSSSSLPRRSWSLSSSSSSSLVPKFRPRFGITSLRNDSEFSRFEVRATSVPESAGEIQESSNLFKTLELGALFGLWYISNIYFNIYNKQVLKVYPFPVTVSAIQFAIGTVLVLFTWGFNIYKKPKVSGSQLAALLPLAVAHLLGNLFTNMSLDKVAVSFTHTIKASEPFFSVILSAIFLGERPTLWVFASLIPIVGGVGLASATEASFNWFGFWSAMASNLTNQSRNVLSKKLMIKKEDSLDNITLFSIITIMSFILLAPVAIFMEGVKFTPAYLQSAGLNVSQICTRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINTLGTGVALAGVFLYSRVKRIKAKPKTA 421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8242992 8246043 - Bda023871.1 Bda06g00605 8187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00605 421 Pfam Triose-phosphate Transporter family 120 409 IPR004853 -
Bda06g00605 421 SUPERFAMILY Multidrug resistance efflux transporter EmrE 164 254 - -
Bda06g00605 421 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 119 419 IPR004696 GO:0016021|GO:0022857|GO:0055085
Bda06g00605 421 PANTHER SOLUTE CARRIER FAMILY 35 94 395 - -
Bda06g00605 421 SUPERFAMILY Multidrug resistance efflux transporter EmrE 308 412 - -
Bda06g00605 421 PANTHER TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED 94 395 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00605 Bda-Chr6:8242992 Bda11g01656 Bda-Chr11:50639562 0 dispersed
Bda06g00602 Bda-Chr6:8222811 Bda06g00605 Bda-Chr6:8242992 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00605 K15283 - csv:101203848 552.362