Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00623 CTGCCAATCATTGGAAATTTGCACCAGCTCAGACACCCACCTCATGAATCTCTTCAAAAACTCTCCAAAGAGTATGGTCCGTTGATGTTTCTACAGCTTGGTTCGATTCCAACCGTAGTAATCTCATCGGCAGACATGGCGAAAGAGGTTTTCAAGAACCATGATCTTGTTTTCTCAAGCAGGCCAGCTCTGTACTCTGCGAAGAGAGTCAGTTATGATTTTTCAAATATTTCGTTTGCTTCTTACGGCGAATATTGGAGAGAGTTGAGGAAGATTGTGACGTTGGAGCTGCTAAGTGCTAAGAGGGTTCAATCTTTTCAAACTGTGAGGGAGGAAGAGGTTGCTCTAATGGCGGATTTTGTCGCTGAATCCTCGAACTGCGTTATTCTGAGCGACTTGTTTCTCTCTCTAGCAAATGACATCATCTGTCGAGTTGCTTTTGGCCAGAAACAGGGTGGAAAAAGTGTTCATGACAAGAACACATTTCACGTGCTTCTCCGAGAATTAGATGATTTCTTAGGAGGATTCAGCATAGCAGATTTCTTCCCGTGGCTGGAGTGGATCAACAATGGTTTAGGAGCAAGATATGACAAAAATTTCAGAGAGCTGGCAAGTATCGAAGAACACAGTGACCCACGTCAGCCAAATGATGAACACGAGGACATTGTCGACGTTCTTCTTCGGATTCAGAAAGATCCAAATCGATCCATTCCCCTCACTAACAATCAAATTAAGGCCGCCATTAACGCGAGATATTTTTGTGCAGGAACTGATACATCTTCGTCGACACTGACATGGATAATGGCGGAGCTGATTAAGAATCCACCGGCGATGAAAAAAGCACAAGATGAGATCAGAGGGATCATGAAAGAGAAAACGAAGGTGGAAGAGAGCGATCTGACAAAGCTGGAGTACATAAAGCTGGTGATAAAGGAAGGATTCCGTCTCCACCCACCACTGCCATTGTTGGTGCCTCGAGAAACCATAGAGAACTGCAGCGTCGACGGCTACCACATTCCGGCCAAAACAAGGGTGTTCGTGAACGCAAAAGCCATCGGAACCGACCCGAAATACTGGGAAAACCCAGAAGAGTTCACGCCGGAGAGATTCTGCGACATCTCGGTTGATTACAGGGGACAGCATCACGAGCTGATTCCGTTCGGGGTCGGTCGGAGGAGCTGTCCGGGAATGAACTTTGCTAGCCAGGTGATCGAGCTTGCTCTGGCAACCCTGCTGCTTCGTTTTGATTGGCGGCTGCCAGATGGCCAAATCTTGGACATGGACGAATCTTTTGGGCTTATCGTTAACAACAAGGTTCCCTTGTGCCTAATTGCTAAACTGGTTGCCTAG 1350 46.74 LPIIGNLHQLRHPPHESLQKLSKEYGPLMFLQLGSIPTVVISSADMAKEVFKNHDLVFSSRPALYSAKRVSYDFSNISFASYGEYWRELRKIVTLELLSAKRVQSFQTVREEEVALMADFVAESSNCVILSDLFLSLANDIICRVAFGQKQGGKSVHDKNTFHVLLRELDDFLGGFSIADFFPWLEWINNGLGARYDKNFRELASIEEHSDPRQPNDEHEDIVDVLLRIQKDPNRSIPLTNNQIKAAINARYFCAGTDTSSSTLTWIMAELIKNPPAMKKAQDEIRGIMKEKTKVEESDLTKLEYIKLVIKEGFRLHPPLPLLVPRETIENCSVDGYHIPAKTRVFVNAKAIGTDPKYWENPEEFTPERFCDISVDYRGQHHELIPFGVGRRSCPGMNFASQVIELALATLLLRFDWRLPDGQILDMDESFGLIVNNKVPLCLIAKLVA 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8528232 8529663 + Bda023894.1 Bda06g00623 8205

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00623 449 Coils Coil 278 298 - -
Bda06g00623 449 PRINTS E-class P450 group I signature 307 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda06g00623 449 PRINTS E-class P450 group I signature 394 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda06g00623 449 PRINTS E-class P450 group I signature 348 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda06g00623 449 PRINTS E-class P450 group I signature 22 41 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda06g00623 449 PRINTS E-class P450 group I signature 46 67 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda06g00623 449 PRINTS E-class P450 group I signature 137 155 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda06g00623 449 PRINTS E-class P450 group I signature 244 261 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda06g00623 449 PRINTS E-class P450 group I signature 264 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda06g00623 449 PRINTS E-class P450 group I signature 384 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda06g00623 449 PRINTS P450 superfamily signature 385 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda06g00623 449 PRINTS P450 superfamily signature 308 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda06g00623 449 PRINTS P450 superfamily signature 394 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda06g00623 449 PRINTS P450 superfamily signature 255 272 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda06g00623 449 Pfam Cytochrome P450 1 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda06g00623 449 PANTHER OS08G0105600 PROTEIN 1 448 - -
Bda06g00623 449 SUPERFAMILY Cytochrome P450 1 445 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda06g00623 449 Gene3D Cytochrome P450 1 446 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda06g00623 449 PANTHER CYTOCHROME P450 71A9 1 448 - -
Bda06g00623 449 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 387 396 IPR017972 GO:0005506|GO:0016705
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00623 K20617 CYP71A; cytochrome P450 family 71 subfamily A - qsu:111987054 575.474
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bda06g00623 Bda15g00532 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00623 Bda-Chr6:8528232 Bda04g00730 Bda-Chr4:56517575 2.87E-124 dispersed
Bda07g00224 Bda-Chr7:2583485 Bda06g00623 Bda-Chr6:8528232 5.00E-41 transposed
Bda15g00532 Bda-Chr15:8354957 Bda06g00623 Bda-Chr6:8528232 1.63E-126 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g861 . . Bda06g00623 Bda15g00532 . . . Bma12g01061 . Cmo18g00175 . . . . . . . . . . . . . . . . . . . . . . . Cone13ag0183 . Lsi02g00436 Csa01g00909 Chy12g01217 Cme12g01643 Blo13g00154 Blo15g00245 . . . . . . . . . . . . . . . Bhi08g01683 . . . Hepe07g2179 . . Cla03g00302 . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000114 2 12 3 1 0 7 0 7 6 6 11 9 15 7 3 22 9 4 0 10 11 2 0 8 13 10 6 17 8 7 216
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda06g00623 Bda_Chr06 FPKM 0.196256 0.0 0.423338 0.592757 0.765056 0.0 0.0 0.0 0.31362