Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda06g00662 | ATGGAGGTTTTCTCAAACTATTTTGATTCTAATTATGGGTCGTCGGAAAGAAGTGATGTTAGCTGGACGGGAAATTTTTCCGACGAGGAGGTTTTTCTGGCGGCTAGCTATCCCAAGAAGAGGGCTGGACGGAAGAAGTTTAAGGAGACTAGGCATCCGGTTTACCGGGGAGTGAGGAGGAGGAATTCCGGCAAGTGGGTTTGTGAAGTAAGAGAGCCCAATAAGCAGGCGAGGATTTGGCTGGGGACGTTTCCGACTGCTGAAATGGCTGCTCGCGCCCATGACGTGGCAGCCATTACCCTCCGAGGACGAGGAGCTTGCCTGAATTTCGCTGACTCAGCGTGGCGACTTCCAGTGCCGGCGTCGGCAGATGCAAAGGATATTCAGAAAGCAGCGGCTGAAGCTGCAGAGGCTTTTCGTCCAACGCAGACCAATCCACTGCAGAGGGAGGTCAACCCTGATATATCGGAGGTGGAAGCCGCCGGGAGAATGCCGGAAAATGTGTTCTACATGGACGAGGAGGATGTTTTCGGGATGCCTGAGTTGCTGGTGAACATGGCGGAGGGAATGCTACTGCCGCCGCCGCCGCCGCCGCAAAGGGTAGAAAACAGAGTTGATGACGTGGATTTTGATGCTGACGTGCCACTATGGAGCCATTCTATATAA | 666 | 53.45 | MEVFSNYFDSNYGSSERSDVSWTGNFSDEEVFLAASYPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKQARIWLGTFPTAEMAARAHDVAAITLRGRGACLNFADSAWRLPVPASADAKDIQKAAAEAAEAFRPTQTNPLQREVNPDISEVEAAGRMPENVFYMDEEDVFGMPELLVNMAEGMLLPPPPPPQRVENRVDDVDFDADVPLWSHSI | 221 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 9261373 | 9262038 | - | Bda023949.1 | Bda06g00662 | 8244 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda06g00662 | 221 | Pfam | AP2 domain | 53 | 103 | IPR001471 | GO:0003700|GO:0006355 | |
Bda06g00662 | 221 | SMART | rav1_2 | 54 | 117 | IPR001471 | GO:0003700|GO:0006355 | |
Bda06g00662 | 221 | SUPERFAMILY | DNA-binding domain | 54 | 113 | IPR016177 | GO:0003677 | |
Bda06g00662 | 221 | PRINTS | Ethylene responsive element binding protein signature | 55 | 66 | IPR001471 | GO:0003700|GO:0006355 | |
Bda06g00662 | 221 | PRINTS | Ethylene responsive element binding protein signature | 77 | 93 | IPR001471 | GO:0003700|GO:0006355 | |
Bda06g00662 | 221 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D | 15 | 221 | IPR045277 | GO:0003700 | |
Bda06g00662 | 221 | PANTHER | AP2/ERF DOMAIN-CONTAINING TRANSCRIPTION FACTOR | 15 | 221 | - | - | |
Bda06g00662 | 221 | Gene3D | AP2/ERF domain | 54 | 112 | IPR036955 | GO:0003700|GO:0006355 | |
Bda06g00662 | 221 | ProSiteProfiles | AP2/ERF domain profile. | 54 | 111 | IPR001471 | GO:0003700|GO:0006355 | |
Bda06g00662 | 221 | CDD | AP2 | 55 | 113 | IPR001471 | GO:0003700|GO:0006355 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda06g00662 | Bda15g00742 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda06g00662 | Bda-Chr6:9261373 | Bda15g00742 | Bda-Chr15:10900169 | 1.06E-113 | dispersed | |
Bda03g01398 | Bda-Chr3:50706438 | Bda06g00662 | Bda-Chr6:9261373 | 1.41E-72 | transposed | |
Bda05g00916 | Bda-Chr5:57728101 | Bda06g00662 | Bda-Chr6:9261373 | 9.79E-98 | transposed | |
Bda15g00741 | Bda-Chr15:10894917 | Bda06g00662 | Bda-Chr6:9261373 | 1.87E-31 | wgd | |
Bda06g00662 | Bda-Chr6:9261373 | Bda07g01877 | Bda-Chr7:36182782 | 5.60E-77 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16028 | PF00847 | AP2 | 2.30E-15 | CL0081 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda06g00662 | - | K09286 | qsu:112027778 | 257.299 |