Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00662 ATGGAGGTTTTCTCAAACTATTTTGATTCTAATTATGGGTCGTCGGAAAGAAGTGATGTTAGCTGGACGGGAAATTTTTCCGACGAGGAGGTTTTTCTGGCGGCTAGCTATCCCAAGAAGAGGGCTGGACGGAAGAAGTTTAAGGAGACTAGGCATCCGGTTTACCGGGGAGTGAGGAGGAGGAATTCCGGCAAGTGGGTTTGTGAAGTAAGAGAGCCCAATAAGCAGGCGAGGATTTGGCTGGGGACGTTTCCGACTGCTGAAATGGCTGCTCGCGCCCATGACGTGGCAGCCATTACCCTCCGAGGACGAGGAGCTTGCCTGAATTTCGCTGACTCAGCGTGGCGACTTCCAGTGCCGGCGTCGGCAGATGCAAAGGATATTCAGAAAGCAGCGGCTGAAGCTGCAGAGGCTTTTCGTCCAACGCAGACCAATCCACTGCAGAGGGAGGTCAACCCTGATATATCGGAGGTGGAAGCCGCCGGGAGAATGCCGGAAAATGTGTTCTACATGGACGAGGAGGATGTTTTCGGGATGCCTGAGTTGCTGGTGAACATGGCGGAGGGAATGCTACTGCCGCCGCCGCCGCCGCCGCAAAGGGTAGAAAACAGAGTTGATGACGTGGATTTTGATGCTGACGTGCCACTATGGAGCCATTCTATATAA 666 53.45 MEVFSNYFDSNYGSSERSDVSWTGNFSDEEVFLAASYPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKQARIWLGTFPTAEMAARAHDVAAITLRGRGACLNFADSAWRLPVPASADAKDIQKAAAEAAEAFRPTQTNPLQREVNPDISEVEAAGRMPENVFYMDEEDVFGMPELLVNMAEGMLLPPPPPPQRVENRVDDVDFDADVPLWSHSI 221
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9261373 9262038 - Bda023949.1 Bda06g00662 8244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00662 221 Pfam AP2 domain 53 103 IPR001471 GO:0003700|GO:0006355
Bda06g00662 221 SMART rav1_2 54 117 IPR001471 GO:0003700|GO:0006355
Bda06g00662 221 SUPERFAMILY DNA-binding domain 54 113 IPR016177 GO:0003677
Bda06g00662 221 PRINTS Ethylene responsive element binding protein signature 55 66 IPR001471 GO:0003700|GO:0006355
Bda06g00662 221 PRINTS Ethylene responsive element binding protein signature 77 93 IPR001471 GO:0003700|GO:0006355
Bda06g00662 221 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 15 221 IPR045277 GO:0003700
Bda06g00662 221 PANTHER AP2/ERF DOMAIN-CONTAINING TRANSCRIPTION FACTOR 15 221 - -
Bda06g00662 221 Gene3D AP2/ERF domain 54 112 IPR036955 GO:0003700|GO:0006355
Bda06g00662 221 ProSiteProfiles AP2/ERF domain profile. 54 111 IPR001471 GO:0003700|GO:0006355
Bda06g00662 221 CDD AP2 55 113 IPR001471 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00662 Bda15g00742 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00662 Bda-Chr6:9261373 Bda15g00742 Bda-Chr15:10900169 1.06E-113 dispersed
Bda03g01398 Bda-Chr3:50706438 Bda06g00662 Bda-Chr6:9261373 1.41E-72 transposed
Bda05g00916 Bda-Chr5:57728101 Bda06g00662 Bda-Chr6:9261373 9.79E-98 transposed
Bda15g00741 Bda-Chr15:10894917 Bda06g00662 Bda-Chr6:9261373 1.87E-31 wgd
Bda06g00662 Bda-Chr6:9261373 Bda07g01877 Bda-Chr7:36182782 5.60E-77 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16028 PF00847 AP2 2.30E-15 CL0081 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00662 - K09286 qsu:112027778 257.299