Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00737 ATGGCGAGCAGTTCGGCAGCTGTGAACTTGGAAGATGTACCTTCTGTTGATTTAATGACCGAGCTCCTCCATCGCATGAAATGCTCCTCCAAGCCCGACAAGCGCCTCATTCTCATTGGTCCACCCGGATCAGGAAAGGGTACTCAGTCTCCTATCATCAAGGATGAGTACTGCTTGTGTCACTTAGCAACTGGTGATATGTTAAGAGCTGCTGTTGCTGCTAAAACTCCTCTTGGCATTAAGGCAAAAGAGGCTATGGACAAGGGTGAGCTGGTCTCTGATGATTTGGTTGTCGGGATTATCGATGAAGCAATCAAGAAGCCATCTTGCCAAAAGGGTTTCATTCTTGATGGGTTTCCGAGGACCGTTGTCCAAGCAGAGAAGCTCGATTCGATGCTTGAAAAGAAGGGCGTGAAAGTTGATAAGGTGCTGAATTTTGCCATTGACGATGCAATCTTGGAGGAGAGAATTACTGGACGGTGGATTCATCCGTCCAGTGGACGAAGCTATCACACAAAATTTGCACCTCCCAAAACTCCTGGTCTTGATGATGTCACCGGAGAGCCACTGATTCAACGGAAGGACGATACTGCAGCCGTCCTTAAGTCCCGATTGGAGGCATTTCACAAGCAAACCGAACCAGTGGTAGATTACTATTCGAAGAAGGGGATTGTTGCTAACCTTCACGCAGAGAAACCTCCCAAGGAGGTAACATCAGAGGTTGAGAAAGTACTTTCTTCATAA 744 47.31 MASSSAAVNLEDVPSVDLMTELLHRMKCSSKPDKRLILIGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAIKKPSCQKGFILDGFPRTVVQAEKLDSMLEKKGVKVDKVLNFAIDDAILEERITGRWIHPSSGRSYHTKFAPPKTPGLDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVVDYYSKKGIVANLHAEKPPKEVTSEVEKVLSS 247
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 10027140 10030568 + Bda024042.1 Bda06g00737 8319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00737 247 PANTHER NUCLEOTIDE KINASE 12 246 IPR000850 GO:0005524|GO:0006139|GO:0019205
Bda06g00737 247 CDD ADK 35 237 IPR000850 GO:0005524|GO:0006139|GO:0019205
Bda06g00737 247 PANTHER ADENYLATE KINASE 3 12 246 - -
Bda06g00737 247 PRINTS Adenylate kinase signature 210 224 IPR000850 GO:0005524|GO:0006139|GO:0019205
Bda06g00737 247 PRINTS Adenylate kinase signature 65 79 IPR000850 GO:0005524|GO:0006139|GO:0019205
Bda06g00737 247 PRINTS Adenylate kinase signature 193 208 IPR000850 GO:0005524|GO:0006139|GO:0019205
Bda06g00737 247 PRINTS Adenylate kinase signature 37 50 IPR000850 GO:0005524|GO:0006139|GO:0019205
Bda06g00737 247 PRINTS Adenylate kinase signature 114 130 IPR000850 GO:0005524|GO:0006139|GO:0019205
Bda06g00737 247 Gene3D - 6 246 IPR027417 -
Bda06g00737 247 Pfam Adenylate kinase, active site lid 160 195 IPR007862 GO:0004017
Bda06g00737 247 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 245 IPR027417 -
Bda06g00737 247 Pfam Adenylate kinase 38 223 - -
Bda06g00737 247 ProSitePatterns Adenylate kinase signature. 114 125 IPR033690 -
Bda06g00737 247 Hamap Adenylate kinase [adk]. 34 246 IPR000850 GO:0005524|GO:0006139|GO:0019205
Bda06g00737 247 TIGRFAM adk: adenylate kinase 35 245 IPR006259 GO:0004017|GO:0005524|GO:0016776
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00737 Bda11g01817 CCT
Bda06g00737 Bda11g01817 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00737 Bda-Chr6:10027140 Bda11g01580 Bda-Chr11:49058038 1.97E-59 dispersed
Bda14g00094 Bda-Chr14:680069 Bda06g00737 Bda-Chr6:10027140 1.33E-15 dispersed
Bda01g01462 Bda-Chr1:50523311 Bda06g00737 Bda-Chr6:10027140 2.98E-39 transposed
Bda01g01969 Bda-Chr1:56094235 Bda06g00737 Bda-Chr6:10027140 7.65E-35 transposed
Bda04g01223 Bda-Chr4:62813578 Bda06g00737 Bda-Chr6:10027140 5.88E-63 transposed
Bda15g00663 Bda-Chr15:10122320 Bda06g00737 Bda-Chr6:10027140 8.50E-179 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00737 K00939 - jre:108983966 464.536