Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00764 ATGGAGGGAAAAGGAGATCTGCCTCACCCCGCTTTGGTAGTTGCAGTGGCTATCAATGGAAAGAGCAAGAGTAAATATATCATTAGATGGTCAATCGAGAAGTTTCTTCCAGATGGGATCGTTAATTTCAAGTTATTACACGTTTATCCGATGATCACCGCTGTTCCAACTCCCATGGGGAATTCGATTCCAATTTCGGGAGTCCGTGACGATGTTGTTGCTGCATACAGAAAGGAAGTAGAATGGCAGGCCAGTGAAAAGCTCTTTCCTTATAAGAAAATGTTTGCTCAGAAAAAGGTTCAGTTAGATGTTAAAATAATCGAATCCAACGATGTGGCAAATGCGATATCAGAGGAACTTGCTAAATGCAATATCAATAATCTTGTTATAGGAGCTTCATCTCGTGGCCTTTTTTCGAGGAAGCTTAAAGGTTTGTCCTCGAAAATCTCGGCCAGGGCCCCGAGATTATGCACAGTCTATGCTATTTCAAAAGGAAAATTATTGTCGATACGTCCACCTAATATTTTGCCAAATGATAGCGTAGAAGACGATACAAGTTCTTCTGCAAACTCTTTTTCGAAATACTCTTCAAGCACACAGAACCACGGCTCGGTTAGTTCGTACTCTCCTTTCGATTCTCCATCTCTTCTGAAGCAGCGAGATCAAGCCCTCTCCACCATCAACCAGATTCTTATTAATACAAGAACAAGCTCCCTTCAAGGAAGCTATTCTATGCACCAATCGGTGGGTATGAAAGCTAGGAAGAATGATGGTATTGGCTCCGATGATGGTGAAAATGCGTTGAGTAGTTTCTCTAGTTCGAACAGCTTGGCTATTGATAATTTCTCACAAGTTTCTGATCAAGCTTCGTCTTCGGATGTGCTCAGTCGTCGGTCATGCGAAAGTCAGAATAATATTAACTTTGAGCTCGAAAAGCTGAGAATCGAACTAAGACATACACGAGGAATGTTCGCGCTTGCTCAAAAGGAGGCTTTTGATGCTACTCGAAAGGCGGATAATCTACATAGAATGCGATTGCAAGAAGCTACAAAGCTCAAGGATATTAGCATGAAGGAGGAGGCGGCCAAAGAATTGGCTAATCAAGCGAGGGAGAAATCTGAAGCTGCGCAAAGAGAAGCCATTTTGACGAGAGAACGTGCGGAAAGAGAGGCCATACAGAGGAGAGAAGCAGAGGCCATCGCCTTGCGAGATAAAAGAGAAAAGGAAAAGCTTCAGAGCGCTCTAATGGGGGCATTGCAGAAATACCAAGTATTTTCATGGGAAGAGATCGTAGCTTCGACTTCGTCTTTCTCGGTGGATCTCAAGATCGGAATCGGAGCTTATGGAACAGTTTACAAATGTAATTTACGGAATACAGTTGCAGCCGTGAAGGTTCTTCATACTAGAGAGCGTAAAAAAAACAAGCAATTCTTGCAGGAGCTTGAAATCTTGAGCAAAATTCATCATCCGCATTTGATTCTTCTTCTCGGAGCATGTCCAGATCAAGGCTGCCTGGTTTACGAGTATATGGAGAACGGAAGCTTGGAAGATCGATTGGTTCGAAAAGACGATACGCCTCCCATCCCTTGGTTTGACAGATTTCGAATTGCTTGGGAAGTCGCTTCAGCTCTTGTTTTTCTTCACAGTTCAAAGCCAAAGCCTATCGTTCATCGCGATCTCAAGCCGACCAACATTTTGCTCGATCGTAACCTCGTGAGCAAGATCGGAGACGTAGGCCTTTCGAGGGTGATAAATTCAGACGCATTTCCTGTTTCCTGCAAGGAAACCGGACTAGTCGGAACTCTTTGTTACATAGATCCAGAGTATCAAAGGAGCGGTGAAATTTCTCCAGAATCTGATGTTTACGCTTTTGGAATCGTGATATTGCAGCTTCTTACTGCAAAACCAGCAATGGCATTGGCTTATCTTGTGGAAAATGAGCTCAGGGATGGAAATTTGATGAAGATTTTAGATTCAGAGGCTGGAAATTGGCCGGTCGAAGAGACGAAGCAATTGGCTGAGCTGGGACTTAATTGCACAGAGCTTCGTCGAAAAGATCGGCCAGATTTGCGGGACAGAGTTCTTCCTGTACTCGAGAAATTGAAAATGGCGGCTGATCGAGCTCGTAGTTACTGCTTTAGCTTACCATCTGCAACTCCTAACCATTTCATCTGCCCCATTCTCAAGAATGTAATGACAGATCCTTGTGTTGCTTCGGATGGATACACTTACGATAGGCGGGCGATAGAGAAGTGGCTTCGAGAGGAAGATAAATCACCGATGACGAATTTGCCCTTGCCGGACAAGAATTTAATCCCTAATTACACTCTTCTCTCTGCAATACTTGAATGGAAGTCAATGAAAAGCTGA 2370 43.67 MEGKGDLPHPALVVAVAINGKSKSKYIIRWSIEKFLPDGIVNFKLLHVYPMITAVPTPMGNSIPISGVRDDVVAAYRKEVEWQASEKLFPYKKMFAQKKVQLDVKIIESNDVANAISEELAKCNINNLVIGASSRGLFSRKLKGLSSKISARAPRLCTVYAISKGKLLSIRPPNILPNDSVEDDTSSSANSFSKYSSSTQNHGSVSSYSPFDSPSLLKQRDQALSTINQILINTRTSSLQGSYSMHQSVGMKARKNDGIGSDDGENALSSFSSSNSLAIDNFSQVSDQASSSDVLSRRSCESQNNINFELEKLRIELRHTRGMFALAQKEAFDATRKADNLHRMRLQEATKLKDISMKEEAAKELANQAREKSEAAQREAILTRERAEREAIQRREAEAIALRDKREKEKLQSALMGALQKYQVFSWEEIVASTSSFSVDLKIGIGAYGTVYKCNLRNTVAAVKVLHTRERKKNKQFLQELEILSKIHHPHLILLLGACPDQGCLVYEYMENGSLEDRLVRKDDTPPIPWFDRFRIAWEVASALVFLHSSKPKPIVHRDLKPTNILLDRNLVSKIGDVGLSRVINSDAFPVSCKETGLVGTLCYIDPEYQRSGEISPESDVYAFGIVILQLLTAKPAMALAYLVENELRDGNLMKILDSEAGNWPVEETKQLAELGLNCTELRRKDRPDLRDRVLPVLEKLKMAADRARSYCFSLPSATPNHFICPILKNVMTDPCVASDGYTYDRRAIEKWLREEDKSPMTNLPLPDKNLIPNYTLLSAILEWKSMKS 789
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 10637430 10641324 + Bda024085.1 Bda06g00764 8346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00764 789 Gene3D HUPs 13 163 IPR014729 -
Bda06g00764 789 SMART serkin_6 437 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g00764 789 Gene3D Phosphorylase Kinase; domain 1 416 509 - -
Bda06g00764 789 Gene3D Transferase(Phosphotransferase) domain 1 510 712 - -
Bda06g00764 789 Pfam U-box domain 720 788 IPR003613 GO:0004842|GO:0016567
Bda06g00764 789 MobiDBLite consensus disorder prediction 242 267 - -
Bda06g00764 789 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 718 789 IPR013083 -
Bda06g00764 789 ProSiteProfiles U-box domain profile. 718 789 IPR003613 GO:0004842|GO:0016567
Bda06g00764 789 MobiDBLite consensus disorder prediction 179 211 - -
Bda06g00764 789 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 14 153 - -
Bda06g00764 789 ProSitePatterns Protein kinases ATP-binding region signature. 443 464 IPR017441 GO:0005524
Bda06g00764 789 ProSitePatterns Serine/Threonine protein kinases active-site signature. 555 567 IPR008271 GO:0004672|GO:0006468
Bda06g00764 789 ProSiteProfiles Protein kinase domain profile. 437 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g00764 789 CDD STKc_IRAK 443 701 - -
Bda06g00764 789 SMART Ubox_2 722 784 IPR003613 GO:0004842|GO:0016567
Bda06g00764 789 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 35 10 785 - -
Bda06g00764 789 PANTHER OS02G0152300 PROTEIN 10 785 - -
Bda06g00764 789 Coils Coil 352 390 - -
Bda06g00764 789 Pfam Protein kinase domain 439 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g00764 789 MobiDBLite consensus disorder prediction 173 211 - -
Bda06g00764 789 CDD RING-Ubox_WDSUB1_like 723 763 - -
Bda06g00764 789 SUPERFAMILY RING/U-box 717 786 - -
Bda06g00764 789 CDD STK_N 13 165 - -
Bda06g00764 789 SUPERFAMILY Protein kinase-like (PK-like) 419 692 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00764 Bda-Chr6:10637430 Bda11g00887 Bda-Chr11:8708552 4.47E-132 dispersed
Bda11g01037 Bda-Chr11:10117529 Bda06g00764 Bda-Chr6:10637430 1.13E-156 transposed
Bda05g00084 Bda-Chr5:4040675 Bda06g00764 Bda-Chr6:10637430 1.76E-89 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69676 PF00069 Pkinase 2.60E-42 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00764 - - jre:109002487 967.992