Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda06g00768 | ATGGCATTCTCCGGCGAAGATTCTGCGACGTTGGACCTTATTTCTGAGCGTCTCCTAGGTGACTTTTCCTCCATTGAAGCTTTCTTAAACGACGTCGATCTTTTTCCGAGGGAAGAAATTCGATTCAAAGATCCATTAGGGCCTTCCCGAGTCCTTCCCCGAGCTTCTAGTTTGAGTCACCGTCGTCCGATGCTAAACGTCGCCATACCTCCAGCGGCTGGATTTTCTGCAAATTACCAGTCTCAGTCGATGGGAGAAAGCGGGGACCAGAACTATGTAGCTCCGCATCCGAGCGAGACGAAGCACTACAGAGGCGTTCGCCGGCGGCCATGGGGGAAATTCGCAGCTGAGATTCGCGATCCAAAACAAAAAGGCGCGCGAGTGTGGCTCGGGACCTACGAAACAGCCATTGACGCTGCGAGAGCTTACGATAGAGCTGCTTTCGCAATGCGAGGAAGCAAAGCCATTGTGAACTTCCCGCTGGAAGCCGGCAAATATTCCGACGGAGAGCCGCGGGGGAGAAGAGAGAGAAAAAGGAGTAGAGAGAGTGAGAATGAAGCGTATGAAGTTGCAGAGCGTAAAGTAGTGAAGAAGGAGGAGTCTTTGAAAATGGAGGATACGGTCGGCGAAAGTAACTCGACAGCAAGCATTTCGCCGTCGACGCCGTCGTGGTGGTCGGCCGTTTGGGGTAACGACGTTAAAGGGATATTTGACGTGCCTCTGTTATCGCCGTTATCTCCCCATCCACTCATTGGCTATTCTCAGCTTAAAGTCACATAG | 780 | 52.05 | MAFSGEDSATLDLISERLLGDFSSIEAFLNDVDLFPREEIRFKDPLGPSRVLPRASSLSHRRPMLNVAIPPAAGFSANYQSQSMGESGDQNYVAPHPSETKHYRGVRRRPWGKFAAEIRDPKQKGARVWLGTYETAIDAARAYDRAAFAMRGSKAIVNFPLEAGKYSDGEPRGRRERKRSRESENEAYEVAERKVVKKEESLKMEDTVGESNSTASISPSTPSWWSAVWGNDVKGIFDVPLLSPLSPHPLIGYSQLKVT | 259 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 10684359 | 10685138 | + | Bda024089.1 | Bda06g00768 | 8350 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda06g00768 | 259 | MobiDBLite | consensus disorder prediction | 167 | 187 | - | - | |
Bda06g00768 | 259 | Pfam | AP2 domain | 102 | 152 | IPR001471 | GO:0003700|GO:0006355 | |
Bda06g00768 | 259 | PRINTS | Ethylene responsive element binding protein signature | 103 | 114 | IPR001471 | GO:0003700|GO:0006355 | |
Bda06g00768 | 259 | PRINTS | Ethylene responsive element binding protein signature | 142 | 162 | IPR001471 | GO:0003700|GO:0006355 | |
Bda06g00768 | 259 | MobiDBLite | consensus disorder prediction | 165 | 187 | - | - | |
Bda06g00768 | 259 | ProSiteProfiles | AP2/ERF domain profile. | 102 | 160 | IPR001471 | GO:0003700|GO:0006355 | |
Bda06g00768 | 259 | MobiDBLite | consensus disorder prediction | 207 | 221 | - | - | |
Bda06g00768 | 259 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF105 | 6 | 236 | - | - | |
Bda06g00768 | 259 | MobiDBLite | consensus disorder prediction | 201 | 221 | - | - | |
Bda06g00768 | 259 | Gene3D | AP2/ERF domain | 101 | 162 | IPR036955 | GO:0003700|GO:0006355 | |
Bda06g00768 | 259 | SUPERFAMILY | DNA-binding domain | 102 | 161 | IPR016177 | GO:0003677 | |
Bda06g00768 | 259 | SMART | rav1_2 | 102 | 166 | IPR001471 | GO:0003700|GO:0006355 | |
Bda06g00768 | 259 | CDD | AP2 | 101 | 160 | IPR001471 | GO:0003700|GO:0006355 | |
Bda06g00768 | 259 | Coils | Coil | 181 | 201 | - | - | |
Bda06g00768 | 259 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 6 | 236 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda06g00768 | Bda-Chr6:10684359 | Bda08g00597 | Bda-Chr8:6097599 | 2.88E-49 | dispersed | |
Bda15g00767 | Bda-Chr15:11486761 | Bda06g00768 | Bda-Chr6:10684359 | 4.27E-80 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16033 | PF00847 | AP2 | 2.70E-14 | CL0081 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda06g00768 | K09286 | - | qsu:112033852 | 215.698 |