Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00768 ATGGCATTCTCCGGCGAAGATTCTGCGACGTTGGACCTTATTTCTGAGCGTCTCCTAGGTGACTTTTCCTCCATTGAAGCTTTCTTAAACGACGTCGATCTTTTTCCGAGGGAAGAAATTCGATTCAAAGATCCATTAGGGCCTTCCCGAGTCCTTCCCCGAGCTTCTAGTTTGAGTCACCGTCGTCCGATGCTAAACGTCGCCATACCTCCAGCGGCTGGATTTTCTGCAAATTACCAGTCTCAGTCGATGGGAGAAAGCGGGGACCAGAACTATGTAGCTCCGCATCCGAGCGAGACGAAGCACTACAGAGGCGTTCGCCGGCGGCCATGGGGGAAATTCGCAGCTGAGATTCGCGATCCAAAACAAAAAGGCGCGCGAGTGTGGCTCGGGACCTACGAAACAGCCATTGACGCTGCGAGAGCTTACGATAGAGCTGCTTTCGCAATGCGAGGAAGCAAAGCCATTGTGAACTTCCCGCTGGAAGCCGGCAAATATTCCGACGGAGAGCCGCGGGGGAGAAGAGAGAGAAAAAGGAGTAGAGAGAGTGAGAATGAAGCGTATGAAGTTGCAGAGCGTAAAGTAGTGAAGAAGGAGGAGTCTTTGAAAATGGAGGATACGGTCGGCGAAAGTAACTCGACAGCAAGCATTTCGCCGTCGACGCCGTCGTGGTGGTCGGCCGTTTGGGGTAACGACGTTAAAGGGATATTTGACGTGCCTCTGTTATCGCCGTTATCTCCCCATCCACTCATTGGCTATTCTCAGCTTAAAGTCACATAG 780 52.05 MAFSGEDSATLDLISERLLGDFSSIEAFLNDVDLFPREEIRFKDPLGPSRVLPRASSLSHRRPMLNVAIPPAAGFSANYQSQSMGESGDQNYVAPHPSETKHYRGVRRRPWGKFAAEIRDPKQKGARVWLGTYETAIDAARAYDRAAFAMRGSKAIVNFPLEAGKYSDGEPRGRRERKRSRESENEAYEVAERKVVKKEESLKMEDTVGESNSTASISPSTPSWWSAVWGNDVKGIFDVPLLSPLSPHPLIGYSQLKVT 259
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 10684359 10685138 + Bda024089.1 Bda06g00768 8350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00768 259 MobiDBLite consensus disorder prediction 167 187 - -
Bda06g00768 259 Pfam AP2 domain 102 152 IPR001471 GO:0003700|GO:0006355
Bda06g00768 259 PRINTS Ethylene responsive element binding protein signature 103 114 IPR001471 GO:0003700|GO:0006355
Bda06g00768 259 PRINTS Ethylene responsive element binding protein signature 142 162 IPR001471 GO:0003700|GO:0006355
Bda06g00768 259 MobiDBLite consensus disorder prediction 165 187 - -
Bda06g00768 259 ProSiteProfiles AP2/ERF domain profile. 102 160 IPR001471 GO:0003700|GO:0006355
Bda06g00768 259 MobiDBLite consensus disorder prediction 207 221 - -
Bda06g00768 259 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF105 6 236 - -
Bda06g00768 259 MobiDBLite consensus disorder prediction 201 221 - -
Bda06g00768 259 Gene3D AP2/ERF domain 101 162 IPR036955 GO:0003700|GO:0006355
Bda06g00768 259 SUPERFAMILY DNA-binding domain 102 161 IPR016177 GO:0003677
Bda06g00768 259 SMART rav1_2 102 166 IPR001471 GO:0003700|GO:0006355
Bda06g00768 259 CDD AP2 101 160 IPR001471 GO:0003700|GO:0006355
Bda06g00768 259 Coils Coil 181 201 - -
Bda06g00768 259 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 6 236 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00768 Bda-Chr6:10684359 Bda08g00597 Bda-Chr8:6097599 2.88E-49 dispersed
Bda15g00767 Bda-Chr15:11486761 Bda06g00768 Bda-Chr6:10684359 4.27E-80 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16033 PF00847 AP2 2.70E-14 CL0081 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00768 K09286 - qsu:112033852 215.698