Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00800 ATGTCCATACAGCTCGGAAGAGTTCCGGCACTCGTCGTCTCGTCTCCTGACGCGGCGGAGCAGTTTCTGAAGGCCTACGATGCAACATTCGCTTGTAGGCCGAGGATGGAGGCCCCTGATCAAATGACGTACGGAAGCAAGGGAATGATCTTTACGTATTACGGTCCTTACTATCGAGGCGTGAAGAAGATATGCCATTCCAATCTTCTGAGCAGATCTAAAGTCGACGAGATGAAGAGTATGAGGAAAGAGGAGGTGGCGATAATAATAGAGAAGCTCAGAAGGGCAGCAATGGCGGATCAGGTTGTGAATCTGAGCGCAAATGTGACTGAGCTGATCGAGAACATGACTTTCAGAATGGTTTTAGGGAAGAAAAAGGACGAACGATTCGATTTGAGAGAGATTGTCAGGGAAGTTATCAAATTAACAGGAGCTATCAATATTGCAGACTACCTTCCAACTCCTCGCTTTTTGGATATGCAGAGTAGAACATTCTCTTTTCTGTTTTTTTTTTCGTTACAGGGACTGAGAAAGAGACTGAAGAGAATAACCAGAGAGATAGAAAATATGTTAGAGACGATCATTGAAGAACACCAAGAAAAATCTTCTCATGGGATCGAAGAAGAGAAACCCAGCGACTTCATTGACAGTTTGTTGATTTCGATGATTAAACAGCCCATGAATCCTGAGGATCGTGCATATATGATCGACAGGGAAAACGTCAAATCAGTGGCTTTAGAGATTATCGCTGCTGCAATTAGCACTTCACCTACAGTGATTGATTGGACCTTGTCGGAGCTTCTCCGACATCCAAGGGTAATGAAACTTGCTCAACAAGAGCTGCAGAACGTTGTCGGAATGGACCGTATGGTGGAGGAAACGGACTTGCCGAAGCTTTCTTACTTGGAAATGGTGCTGAAAGAGACTTTTAGACTAAACCCAATTGCTCCTCTTCTCATACCTCGAGAATCCATGGAGGAAACAACTATCAATGGCTATTTCATACCCAAGAAAACTAGGGTTTTCGTCAATACTTGGGCCATCGGAAGAGACCCAAAAGTTTGGTCGGAGAATGTTCTGCAGTTTTACCCAGAAAGATTTCTTGAAAACACTGTCAATATGATCGGAAGAGACTTCGAGTTCTTGCCGTTCGGAGCTGGCCGGAGAGGGTGCCCGGGAATCAACGTGGGATTGATGACCGTGAAGTATGCTCTTGCTCAATTATTGCATTGCTTCGACTGGAATCTTCCCGCCGGCGTTCTTCCGGAAGACATAGATATGAGTGAAAAGTATGGCGTTGCAATGACAAGAGCTAAGCCACTGTTTGCCATACCAACCAATCGCCTCCCTTGTTTGTCTACCTTCTAA 1368 45.03 MSIQLGRVPALVVSSPDAAEQFLKAYDATFACRPRMEAPDQMTYGSKGMIFTYYGPYYRGVKKICHSNLLSRSKVDEMKSMRKEEVAIIIEKLRRAAMADQVVNLSANVTELIENMTFRMVLGKKKDERFDLREIVREVIKLTGAINIADYLPTPRFLDMQSRTFSFLFFFSLQGLRKRLKRITREIENMLETIIEEHQEKSSHGIEEEKPSDFIDSLLISMIKQPMNPEDRAYMIDRENVKSVALEIIAAAISTSPTVIDWTLSELLRHPRVMKLAQQELQNVVGMDRMVEETDLPKLSYLEMVLKETFRLNPIAPLLIPRESMEETTINGYFIPKKTRVFVNTWAIGRDPKVWSENVLQFYPERFLENTVNMIGRDFEFLPFGAGRRGCPGINVGLMTVKYALAQLLHCFDWNLPAGVLPEDIDMSEKYGVAMTRAKPLFAIPTNRLPCLSTF 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 11142117 11143576 - Bda024125.1 Bda06g00800 8382

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00800 455 Coils Coil 173 200 - -
Bda06g00800 455 SUPERFAMILY Cytochrome P450 2 448 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda06g00800 455 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 384 393 IPR017972 GO:0005506|GO:0016705
Bda06g00800 455 Pfam Cytochrome P450 2 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda06g00800 455 PRINTS P450 superfamily signature 304 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda06g00800 455 PRINTS P450 superfamily signature 251 268 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda06g00800 455 PRINTS P450 superfamily signature 382 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda06g00800 455 PRINTS P450 superfamily signature 391 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda06g00800 455 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 450 - -
Bda06g00800 455 Gene3D Cytochrome P450 1 443 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda06g00800 455 PRINTS E-class P450 group I signature 391 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda06g00800 455 PRINTS E-class P450 group I signature 303 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda06g00800 455 PRINTS E-class P450 group I signature 381 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda06g00800 455 PRINTS E-class P450 group I signature 260 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda06g00800 455 PRINTS E-class P450 group I signature 240 257 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda06g00800 455 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda06g00800 455 PANTHER CYTOCHROME P450 93A3-LIKE 1 450 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00800 - - - qsu:112012067 496.123
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bda05g00146 Bda06g00800 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00800 Bda-Chr6:11142117 Bda10g00117 Bda-Chr10:2833848 5.21E-136 dispersed
Bda06g00800 Bda-Chr6:11142117 Bda04g00067 Bda-Chr4:1148303 1.87E-137 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g952 . . Bda05g00146 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo07g00310 . Bda06g00800 . . . . Bma12g01250 . . . . . . . . . . . . . . . . . . . . . . . . . . .
Vvi17g340 . . Bda06g00800 . . . . Bma12g01225 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000178 4 7 3 4 2 4 0 6 3 8 4 3 4 9 9 8 4 6 2 6 11 7 2 9 10 11 15 7 7 6 181
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda06g00800 Bda_Chr06 FPKM 25.597727 25.803463 32.147209 30.943377 25.162891 22.559599 25.180065 28.615185 29.801067