Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00804 CGAGCCAGTCTGGTTGGTTGGTTGAATAGTGTTTTTCCCGGTTCAAACCTATCGAAAGATGCTTCTGATGAGGAGCTTAGAACATGTCTATATGATGGTAATATCTTAGTTCATCTATTGAACAGGCTGAAACTTGTCAATGAGGTAGGGGACTTTGCTTATTCAAGAGCTTCACGTTTGGAAAAGCTTACATGGTTTTTGGCAGCTATGAAGAAAATGGGACTGCCGAGGTTTGCAATTTCAGAGCTTGAGAAGGGAGGATCCTTGAAAAGTGTCAAGGATTGCGTATTTGCTCTTAGAGAGCGATATCAGCAAAATTACGCGGTAGATAATACTTATACAGGAAGCCCAAATTCTACAGTGGAAAGCCCCTGTGCAGATTCACCTATATTTAGCCAATTTTCTCTGTTGTCTGGTGAACAGAGACGAAAAATCTCGTCAAAGTCGGCATTTCAACGCTCCTTCCTTAGTGCGATCGCCTCAGATCCTCCGGCAGCACCGGTTCATCATGGTGGGCATAAATTTCATGAGGTGTTTCAACAGAAACAAGTTTGCTATGTAGATCTTCCTGCCGCCAAAATTTCTGAGATGATGACACCAAATAGTTTAAATAACACTCCAACTCAATCTCTTTTGAGCGTTGTTAATGGAGTTTTGGATGAAAGAGTTGAAAGAAATACCGGTGAAATCCCTCATCGAGTTGCATGTCTATTAAGAAAAGTTGTGCAGGAGATTGAGAGGCGCATATCAACTCAATCAGAACACCTCAGAACTCAAAACAATCTCTTCAAGTCTCGTGAAGAGAAATATCAGTCTCGAATAAGAATCCTGGAGGCCTTTGCAGCCGGTTTAGGTGAAGAGAGTCTAGTTAAGAAAACCAAAGTAGAAGAGAAGAAAAAATTAGAAGGCGATGATCTGATCAAGTTGATTAAAGAAAAAGAAGAAAAACAGCAAGAGATATTAGCATTGAAACAAGAACTGAAAGTTATTAAAAAGACGGATGAGTTGCGCAACATGCAAATGGAGACAGAAGCTAAGGAAGCCAAGGTAAAGCTTGAGATGAGATTAAAAGAACTCGAGCGCCTTTTGACTGATTCAATGAACAAGGTGCAAGATCTAGAGGCATTTTCCGGGTCCAAGTGTCAAAGATGGAGTACAAAAGAGCATAATTACCAAACCTTTATAGATTTTCAATCTAGAGCATTACAGGAAGTGAGATTCTTCTCTGAGTCTATTAAACAAAAGATTATGAAGACCCAACTAACCTATTCAAAAGAATTTAATGGCTTAGGAGTAAAGCTTAAAGAATTGCTTGATATTGCTGAGAAATACAAAGTTCTTCTTTTGGAAAATAGAAAGATGCTTAATGAGATTCAGGAATTAAAAGTTGAAATATTTTCTGATATCCAACCTTTAATTCAATCTGTTCTTGATGGATATAATGTCTGCATATTTGCTTATGGACAGACGGGCTCAGGAAAGACCTACACAATGTTAATGGATATTGGACTGAAAAACAGAGCAGTTGGTGCCACTGCACTCAATGAAAGAAGTAGCCGCTCACATAGTGTTGTGACTGTTCATGTACGTGTAACGGATATGAAGACGGCTGCTTCTTTGCATGGAAATCTCCATTTAGTTGATCTTGCTGGAAGTGAAAGGGTGGATAGATCCAAAGTTACTGGCGATAGACTTCTGGAGGCTCAACATATAAACAAATCTTTATCTGCACTTGGAGATGTCATTTTTACTTTGGCACAGAAAACCTCCCATGTTCCCTTTAGAAATAGCAAGCTTACTCAGCTTCTTCAAAGCTCTCTGGGTGGTCAAGCGAAGACATTGATGTTTGTCCAACTTAATCCTGATGTCAGTTCATATAGTGAGTCTCTCAGTACATTGAAATTCGCCGAAAGGGTATCAGGTGTTGAGCTTGGTGCTGCTCGAAGCAGCAAAGAAGGAAGAGACGTTCGAGAATTAATGGATCAGGTGGCTTCTCTTAAAGACACAATATCGAAAAAGGATGACAAGATAGAGCGGTTGCAATTGCTCAAGGATTTTAAAAATGTCTACCCTATTAATGGTGAGAAAGAAGGACCAGGTTTCTGGTCTGAGTATAGTGATGTGCATTCTGAAGCTGATTCTCAGCAATATATGGGTGACTTTAAGCACCAAAATGAATTTTTCTGTCAATCAAAGGTCCCCAGAGGAGTAGGTAGCTGGCAAGAAGAATGGGTGATTTGTAGGGTTTTCCAAAAGAGCTCAACGGGAAAAAAACCTAATCAAACCCTCGGTTCTCTCGAATGCCCTTGCGACACAAACTCTATCGGAGGAGGCCACATTGAGATACCGAGTTTAATCGACAATAACTTAACCAATTCTTCAAATGGGTACAATAATATCGATACAAACATGATGTACCCGGCTGCACCGAATGATGTCCCTTCGCTTCCGTTTCTCACTTGGCCTTCGAATCCTTCATCCCTTCTCAGCTCGAATTTCACTGTGAATTCTTTGCTTTTGAAGGCATTGCAGCTTAGGAGCTATCAGCAAAGGGAAAATCAATTGAAAATTTATGACAATAACGCGTTTATTCAACAAGGGTTCTCGCCCTTTAGGAACGAGATGAGCTCTGATTTCCAAGCTTCTTCTTCAAAGAGCATAGAAAATTTAACTCCACAGCAGGAGCAACCATTAAACTTGGACTCCATTTGGTGA 2715 40.18 RASLVGWLNSVFPGSNLSKDASDEELRTCLYDGNILVHLLNRLKLVNEVGDFAYSRASRLEKLTWFLAAMKKMGLPRFAISELEKGGSLKSVKDCVFALRERYQQNYAVDNTYTGSPNSTVESPCADSPIFSQFSLLSGEQRRKISSKSAFQRSFLSAIASDPPAAPVHHGGHKFHEVFQQKQVCYVDLPAAKISEMMTPNSLNNTPTQSLLSVVNGVLDERVERNTGEIPHRVACLLRKVVQEIERRISTQSEHLRTQNNLFKSREEKYQSRIRILEAFAAGLGEESLVKKTKVEEKKKLEGDDLIKLIKEKEEKQQEILALKQELKVIKKTDELRNMQMETEAKEAKVKLEMRLKELERLLTDSMNKVQDLEAFSGSKCQRWSTKEHNYQTFIDFQSRALQEVRFFSESIKQKIMKTQLTYSKEFNGLGVKLKELLDIAEKYKVLLLENRKMLNEIQELKVEIFSDIQPLIQSVLDGYNVCIFAYGQTGSGKTYTMLMDIGLKNRAVGATALNERSSRSHSVVTVHVRVTDMKTAASLHGNLHLVDLAGSERVDRSKVTGDRLLEAQHINKSLSALGDVIFTLAQKTSHVPFRNSKLTQLLQSSLGGQAKTLMFVQLNPDVSSYSESLSTLKFAERVSGVELGAARSSKEGRDVRELMDQVASLKDTISKKDDKIERLQLLKDFKNVYPINGEKEGPGFWSEYSDVHSEADSQQYMGDFKHQNEFFCQSKVPRGVGSWQEEWVICRVFQKSSTGKKPNQTLGSLECPCDTNSIGGGHIEIPSLIDNNLTNSSNGYNNIDTNMMYPAAPNDVPSLPFLTWPSNPSSLLSSNFTVNSLLLKALQLRSYQQRENQLKIYDNNAFIQQGFSPFRNEMSSDFQASSSKSIENLTPQQEQPLNLDSIW 904
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 11267894 11287202 + Bda024131.2 Bda06g00804 8386

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00804 904 PANTHER KINESIN-LIKE PROTEIN KLP-3 499 705 - -
Bda06g00804 904 Coils Coil 306 333 - -
Bda06g00804 904 ProSiteProfiles Kinesin motor domain profile. 499 642 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda06g00804 904 PANTHER KINESIN-4-LIKE ISOFORM X1 464 498 - -
Bda06g00804 904 Coils Coil 656 683 - -
Bda06g00804 904 MobiDBLite consensus disorder prediction 882 904 - -
Bda06g00804 904 Gene3D Kinesin motor domain 501 684 IPR036961 -
Bda06g00804 904 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 464 680 IPR027417 -
Bda06g00804 904 SMART kinesin_4 347 650 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda06g00804 904 PANTHER KINESIN-4-LIKE ISOFORM X1 1 465 - -
Bda06g00804 904 SUPERFAMILY Calponin-homology domain, CH-domain 3 106 IPR036872 -
Bda06g00804 904 Pfam Calponin homology (CH) domain 3 104 IPR001715 GO:0005515
Bda06g00804 904 Pfam Kinesin motor domain 500 640 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda06g00804 904 Pfam Kinesin motor domain 462 499 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda06g00804 904 PANTHER KINESIN-LIKE PROTEIN KLP-3 464 498 - -
Bda06g00804 904 Gene3D - 1 108 IPR036872 -
Bda06g00804 904 Gene3D Kinesin motor domain 457 500 IPR036961 -
Bda06g00804 904 Gene3D - 303 342 - -
Bda06g00804 904 PANTHER KINESIN-LIKE PROTEIN KLP-3 1 465 - -
Bda06g00804 904 PRINTS Kinesin heavy chain signature 592 613 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda06g00804 904 PRINTS Kinesin heavy chain signature 479 500 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda06g00804 904 PANTHER KINESIN-4-LIKE ISOFORM X1 499 705 - -
Bda06g00804 904 Coils Coil 444 464 - -
Bda06g00804 904 Coils Coil 342 376 - -
Bda06g00804 904 ProSiteProfiles Calponin homology (CH) domain profile. 1 104 IPR001715 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00804 K10406 KIFC2_3; kinesin family member C2/C3 - jre:108983676 452.21
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00804 Bda-Chr6:11267894 Bda11g01393 Bda-Chr11:17525605 1.89E-16 dispersed
Bda06g00804 Bda-Chr6:11267894 Bda08g00516 Bda-Chr8:5209324 1.79E-70 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g325 . . Bda06g00804 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone13ag0285 . . . . . . Blo15g00073 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002869 5 3 4 3 3 1 2 1 1 1 1 1 2 1 1 2 1 3 2 1 1 1 1 1 1 1 1 5 1 2 54
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda06g00804 Bda_Chr06 FPKM 11.697331 12.769431 12.969378 11.927762 16.53372 18.992733 15.839275 15.014516 17.694946