Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00810 ATGGCGACTCCTTTTACGGGATTGCAGCTCAGAGACGGAGGCGGAGTTGCAGTGCTGTCGAATTCAGTGAATAAGGTAGATGCGTCTTCGTCTCCGTCACCGCCTCCTTCGTCTTCAAATGGTGGTTGTTTGAGGAGCTCCGAGCCTAAGTCTCCTATTCTGATTTTTTTGTTCTTTCACAAAGCGATTCGTTATGAGCTTGATGCGCTTCACATGTTCGCTATGGCTCTCGCTACTGGCCAGCGAACGGATATTCAGCCTCTTATCAAGCGATACCATTTTCTCAGATCAATTTATAAACATCACTCCAATGCCGAAGACGAGGTAATTTTTCCAGCACTTGACATTCGCGTGAAGAATGTAGCTCAAACGTACTCTCTCGAGCACAAAGGAGAAAGCAACCTTTTTGATCATCTTTTTGAGCTCCTTAATTCAAGTACACAAGATGATGAATGCTTATCCCGGGAGTTGGCGTCTTGTACCAGAGCATTAAGGACATCAGTTAGCCAACACATGGCCAAGGAAGAAGAGCAGGTCTTTCCCTTGCTCATGGAGAAGTTCTCTCTTGATGAGCAAGCCTCTCTGGTCTGGCAATTGTTTTGCAGCATTCCTGTGAATATGATGGCTGAATTTCTTCCTTGGCTAGCATCATCTATTTCACCAGATGAATCTCGGGATCTGCGGAAGTGTTTGAGCGAGATAGTTCCCAAGGAAAAGCTTCTTCAACAGGTCATATTTTCGTGGATGGAAGGGAGAAACGGTGCTATTGTTGCTGAAAGTCGCATAGATGATTCTTTTGGTGGATGTTGTGTTGATACTAGCATTTGCATATCATCCCAGGAAACAGAAAAAGTAAAGAGAGCTTGTGTAGAGATGACTACTGGAAAAAGGAAACATATTGACTTTATTGATGATACTACTGATGTCATGGAGACACATCCAATAAATGAAATATTGCTTTGGCACAATGCGATTAAAAAGGAGTTGACTGAGATAGCTGAAGAGGCTAGGAAAATACAACTTTCTGGAAATTTTGATAATCTTTCAGCCTTCAATGAGAGACTGCATTTCATTGCTGAAGTTTGCATCTTTCACAGTATTGCTGAAGACAAGGTTATCTTTCCGGCAGTAGATGGAGAGTTATCCTTTCTTCAGGAGCATGCTGAAGAAGAAAGTCAATTTAAGGAATTCAGGTCGTTGATGGAAGAAGGCATTCAAAGTGATGGATCAGTGTCTAATTCAACAGCTGAATTTTACTCAAAGTTGTGTTCGCTTGCTGATCAAATTATTGATACAATTCAGAGGCACTTCAATAATGAGGAACTTCAGGTTCTTCCGCTTGCTCGAAAGCACTTTAGCCTCAAACAACAACGGGAACTTCTGTATCGTAGCTTGTGCATGATGCCCCTGAAATTAATTGAGCGTGTCTTGCCATGGCTGATTGGGTCATTATCAGAAGATGAAGCTGGAAATCTTCTGAAAAACATCCAATTGGCAGCTCCTACATCTGATACTGCTTTAGTGACACTCTTTTCTGGATGGGCTTGCAAGGCCCGGAACCGAGGGTTATGCTTGTCTTCAAGAGGGACTGGTAGCTGTCCAGTAAAAAGGCTTATTGACATTGAAGAAAATGTTGTTCCATCATTTTGTTCACATGCTTCTGCATTACCTCCAAGAGATAGTAAATTATCAAGTAAAGAAAATAACTTTGAAAGGCCGGCTAAACGAAATGTCTCAGTTTTGTGCAAAAATTGTGATGCCTCTAGTTTCTTAGAGGCTGATAATTTCCAGCATCCTTGCTGTGGTGATGAATCTTGTTGTGTCCCAGGTTTAGGAGTAAGTAGCAATAATCTAGGCATGAGTTCTCTCAACTCGAGTCTTTTCTCACGGGAAACCGATATTAACATTTCTGACGTTGAGGCTTCAGGACGACCAATTGATACTATTTTTAAGTTTCATAAAGCTATAAGGAAAGACTTGGAATATTTAGATGTTGAATCTGGAAAGCTTAATCAATGTGATGAGACGTTCCTACGGAAATTTAGTGGGAGATTTCGCCTGCTATGGGGATTGTATCGAGCTCATAGTAATGCTGAAGATGATATAGTGTTCCCTGCTCTAGAATCCAAAGAGGCATTGCACAATGTTAGTCACTCGTACACACTGGACCACAGACAGGAGGAAAAGTTATTTGAAGACATTGCAAGTGTTCTTTTGGAACTTTCTCATCTACATGGAAACTCCTCTTTGGATATTGATTCATCTGGAAATCAGCTTGGAAAGCATGTCGAGCTAGCTACAAAGCTTCAAGGAATGTGCAAATCCATAAGAGTGTCACTAGATCAGCATATTTTCAGGGAGGAACTTGAGCTATGGCCATTGTTTGGAAAACATTTCTCTGTGGAGGAGCAAGACAAAATAGTTGGCCGCATCATTGGAACAACAGGTGCAGAAGTACTCCAATCAATGTTACCATGGGTAACTTCAGCACTGACAGAGGACGAACAAAATATAATGATGTATACTTGGAAGCAAGCCGCAAAGAATACCATGTTCAATGAGTGGCTCAATGAATGTTGGAAAGGAATTGAGGCATCTACTTTACGTACGGGGACATTGGAAGCTAATATTGCTCAAAAAGGTGTTGAGATTCGAGAAGGCTTGGATCAATGTGATCAGATGTTCAAGCCTGGCTGGAAAGATATTTTTCGAATGAATCAAAATGAGATTGAATCAGAGATTAGAAAGGTCTACCAGGATTTGACTCTTGATCCAAGAAGAAAAGCGTATCTTGTCCAGAATCTTATGACCAGTCGCTGGATTGCCACCCAACAGAAGCTAACAGAAATTACGGTGGCAAGTTCTAATATTGAAGATGTAGCAGGACGTTCACCATCGTATTGTGACCCTGATAAAAATAAATTTGGGTGTGAGCATTACAAAAGAAACTGCAAACTCCGTGCTGCTTGCTGTGGCAAGTTGTTTACATGTCGGTTTTGTCATGATAATGTTAGCGACCATTCTATGGATAGAACTGTCTATCATTGCCCATTTTGCAACTTGTGCCGTCTGGGGAGAGGTCTTGGACATGACTTTTTTCACTGCATGACGTGCAATTGTTGTCTGGGGATAAAGATTGTGAACCACAAGTGTCTGGAAAAAAGTTTAGAAACAAATTGTCCTATCTGCTGTGATTTTCTGTTCACTTCCAGCGCAACAGTCAGAGCTCTACCATGTGGACATTACATGCATTCAGCTTGCTTTCAGGCTTACACGTGTAGCCATTATACCTGTCCAATTTGCAGCAAGTCTTTGGGAGACATGGCGGTTTATTTCGGCATGCTTGATGCTCTGTTGGCTGCTGAAGAGCTTCCACACGAATACAGGGATCGTTGTCAGCAGGATATATTGTGCAACGACTGTGATAGGAAGGGGACGTCTCGATTTCATTGGTTATATCACAAGTGCGGACTTTGCGGTTCATACAACACCCGGGTCATAAAAAATGAGACTATAAATGTAGATTGCTCGGAATCAAATCACTAA 3546 41.74 MATPFTGLQLRDGGGVAVLSNSVNKVDASSSPSPPPSSSNGGCLRSSEPKSPILIFLFFHKAIRYELDALHMFAMALATGQRTDIQPLIKRYHFLRSIYKHHSNAEDEVIFPALDIRVKNVAQTYSLEHKGESNLFDHLFELLNSSTQDDECLSRELASCTRALRTSVSQHMAKEEEQVFPLLMEKFSLDEQASLVWQLFCSIPVNMMAEFLPWLASSISPDESRDLRKCLSEIVPKEKLLQQVIFSWMEGRNGAIVAESRIDDSFGGCCVDTSICISSQETEKVKRACVEMTTGKRKHIDFIDDTTDVMETHPINEILLWHNAIKKELTEIAEEARKIQLSGNFDNLSAFNERLHFIAEVCIFHSIAEDKVIFPAVDGELSFLQEHAEEESQFKEFRSLMEEGIQSDGSVSNSTAEFYSKLCSLADQIIDTIQRHFNNEELQVLPLARKHFSLKQQRELLYRSLCMMPLKLIERVLPWLIGSLSEDEAGNLLKNIQLAAPTSDTALVTLFSGWACKARNRGLCLSSRGTGSCPVKRLIDIEENVVPSFCSHASALPPRDSKLSSKENNFERPAKRNVSVLCKNCDASSFLEADNFQHPCCGDESCCVPGLGVSSNNLGMSSLNSSLFSRETDINISDVEASGRPIDTIFKFHKAIRKDLEYLDVESGKLNQCDETFLRKFSGRFRLLWGLYRAHSNAEDDIVFPALESKEALHNVSHSYTLDHRQEEKLFEDIASVLLELSHLHGNSSLDIDSSGNQLGKHVELATKLQGMCKSIRVSLDQHIFREELELWPLFGKHFSVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTEDEQNIMMYTWKQAAKNTMFNEWLNECWKGIEASTLRTGTLEANIAQKGVEIREGLDQCDQMFKPGWKDIFRMNQNEIESEIRKVYQDLTLDPRRKAYLVQNLMTSRWIATQQKLTEITVASSNIEDVAGRSPSYCDPDKNKFGCEHYKRNCKLRAACCGKLFTCRFCHDNVSDHSMDRTVYHCPFCNLCRLGRGLGHDFFHCMTCNCCLGIKIVNHKCLEKSLETNCPICCDFLFTSSATVRALPCGHYMHSACFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLAAEELPHEYRDRCQQDILCNDCDRKGTSRFHWLYHKCGLCGSYNTRVIKNETINVDCSESNH 1181
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 11326123 11338357 - Bda024139.1 Bda06g00810 8392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00810 1181 CDD Hr-like 317 446 - -
Bda06g00810 1181 CDD Hr-like 55 181 - -
Bda06g00810 1181 ProSiteProfiles Zinc finger RING-type profile. 1060 1102 IPR001841 -
Bda06g00810 1181 PANTHER CHY ZINC FINGER PROTEIN 1010 1176 - -
Bda06g00810 1181 PANTHER CHY ZINC FINGER PROTEIN 35 1012 - -
Bda06g00810 1181 Gene3D nmb1532 protein domain like 51 201 - -
Bda06g00810 1181 Gene3D nmb1532 protein domain like 318 464 - -
Bda06g00810 1181 SUPERFAMILY RING/U-box 1059 1105 - -
Bda06g00810 1181 ProSiteProfiles Zinc finger CHY-type profile. 970 1040 IPR008913 GO:0008270
Bda06g00810 1181 CDD Hr-like 647 793 - -
Bda06g00810 1181 Gene3D nmb1532 protein domain like 640 853 - -
Bda06g00810 1181 ProSiteProfiles Zinc finger CTCHY-type profile. 992 1059 IPR017921 -
Bda06g00810 1181 SMART ring_2 1060 1101 IPR001841 -
Bda06g00810 1181 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 1010 1176 - -
Bda06g00810 1181 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 35 1012 - -
Bda06g00810 1181 SUPERFAMILY CHY zinc finger-like 972 1041 IPR037274 GO:0008270
Bda06g00810 1181 MobiDBLite consensus disorder prediction 25 45 - -
Bda06g00810 1181 Gene3D - 1132 1177 - -
Bda06g00810 1181 Pfam Ring finger domain 1059 1101 IPR001841 -
Bda06g00810 1181 CDD RING-H2_Pirh2 1059 1102 - -
Bda06g00810 1181 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1053 1104 IPR013083 -
Bda06g00810 1181 Pfam Zinc-ribbon 1107 1165 IPR039512 -
Bda06g00810 1181 Pfam Hemerythrin HHE cation binding domain 57 183 IPR012312 -
Bda06g00810 1181 Pfam Hemerythrin HHE cation binding domain 645 794 IPR012312 -
Bda06g00810 1181 Pfam Hemerythrin HHE cation binding domain 313 448 IPR012312 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00810 Bda15g00514 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00810 Bda-Chr6:11326123 Bda15g00514 Bda-Chr15:8211756 0 dispersed
Bda06g00810 Bda-Chr6:11326123 Bda08g00283 Bda-Chr8:2941588 3.93E-25 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00810 K16276 - mnt:21402857 1749.95