Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00829 GACTCCATGAGAGACACCTTAGCTGAGTTTCTTTCCACTAGGCCAGAAGGGTTTTATGTTTCATCTGGGATAGGGGTATGGAACGGACTGGTATTTGAAATAGTGATGACATTCGGGTTGGTTTACGTTTTCTACTCAACCGTCGTCGACCCGAAGAGAGGAATGGCACCGTTGGCGGTCGGGTTGATTCTCGGTGCGAATATGTTAGCGGGCGGTCCCTACGACGGGGCATGCATGAACCCGGCACGAGCATTCAGACCGGCTCTGGTTGGGTGGAGATGGAGGAACCATTGGATCTACTGGGTCGGCCCGCTTATGGGCGGTGGCCTGGCCAGCGTCATCTATAAGTTCATGGTGATTCCGGCGGTGGTCGATTAG 378 53.97 DSMRDTLAEFLSTRPEGFYVSSGIGVWNGLVFEIVMTFGLVYVFYSTVVDPKRGMAPLAVGLILGANMLAGGPYDGACMNPARAFRPALVGWRWRNHWIYWVGPLMGGGLASVIYKFMVIPAVVD 125
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 11556594 11557449 + Bda024162.1 Bda06g00829 8411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00829 125 PRINTS Major intrinsic protein family signature 32 50 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda06g00829 125 PRINTS Major intrinsic protein family signature 98 118 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda06g00829 125 PRINTS Major intrinsic protein family signature 61 83 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda06g00829 125 PANTHER BNAA09G44820D PROTEIN 13 124 - -
Bda06g00829 125 SUPERFAMILY Aquaporin-like 15 121 IPR023271 -
Bda06g00829 125 PANTHER AQUAPORIN-8 13 124 IPR034294 -
Bda06g00829 125 Gene3D Glycerol uptake facilitator protein. 2 123 IPR023271 -
Bda06g00829 125 Pfam Major intrinsic protein 19 115 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00829 Bda-Chr6:11556594 Bda07g00601 Bda-Chr7:7353841 3.64E-43 dispersed
Bda06g00829 Bda-Chr6:11556594 Bda05g01212 Bda-Chr5:60068461 1.01E-46 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00829 K09873 - jre:109012205 179.874