Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00850 ATGTTCACCGAGTGCCCTCACCCAGATGAAAAACAGAGAATGCAGTTGAGCAGAGAACTGGGTTTGGCGCCTCTGCAAATCAAATTCTGGTTCCAAAACAGAAGAACCCAGATGAAGACCCAACACGAGAGAGCAGACAACTGTTGTCTTCGCGCAGAGAACGAAAAGATCAGATTTGAAAACATTGCAATAAGAGAAGCACTCAAAAATTTGATTTGTCCATGTTGTGGTGGACCTCCCCTTACCGAAGATTCCTATTTCGATGAGCAGAAGCTTCGCCTGGAGAATTCCCAAGTTTCCAGCATTGCATCTAAACACATGGGGAGGCCAATTCCCCAACTCCCACCTGTTCATCCTATCCATATTTCCTCTCTTGAGCTATCAATGGGTAATTTTGGAACTTCTGGTCCTTCTCTGGATCTTGATCTTCTCCCAGGAACCTCGTCGACTGGTCGGTCTTTACCTTTCCAGTCGATCGGCTTATCCGATGAGGATAAATCCCTAATGGCTGATATAGCTGCACATTCAATGGAAGAACTAATCGAGCTTGCGCAATCAAATGAACTATTATGGATGAAATCCTCCACACATGGGAAAGACGTTCTTAATCTCGAAAATTACGACCGGATTTTCCCCAAGCCTACAGTCCGATTGAAAAATCCCCATCTTCGAATTGAAGCATCTAGAGATTCTGGTGTTGTTATAATGAATTCTTTAACATTGGTGGACATGTTTATGGACTCTAACAAGACAATGGAGCTATTTCCCGGCATTATTTCATCGGCAAGAACGATGGAAGTGATATCGTCTGGATTATTGGGTAGCCATAGTGGAACTTTACTTCTGATGCATGAAGAATTACAGGTCCTTTCTCCATTAGTACCGACTCGAGAGTTCTATTTCTTAAGATATTGCCAGCAAATCAATCAGGAGTTGTGGGCAATATGCAATGTTTCGTACGATTTTCCGGGGGAAAATGGGTTCGGTTCCCAGTTTCAATCTCGTCGGCTTCCAACAGGCTGCCTAATTCAAGACATGGCAAATGGTCATTCTAAGGTTATTTGGGTTGAACGTGTGGAAATCGAAGACAAAAACCCTCCTCATCGACTCTATCGAGACCTGTTTTATGGTGGCATCGCATTCGGCGCTGAAAGATGGGTTGCCACTCTCCAAAGAATGTGCGAAAGATTTTCCTCTTCAATGGCTGCAGCCAATTCTGCCCGCGAACTCGAAGGAGATTTTTCAGTAATTTTTTCGCCAGACGGCAAGAGGAGCACGATGAAACTGGCCCAGCAAATGATCAACAACTTTTGTGCAAGTATCAGCACATCGAACGGTCACCGATGGACGACTCTTTCCGGACAGAACGAGGTCGGAGTTAGAGTCACGGTCAATAAAAGCAATAATCCTGGCCAACCCAATGGCGTGGTTCTTAGTGCAGCCTCCACAATTTGGCTCCCCGTTTCCCCGCAGGACGTCTTCAATTTTTTCAGAGACGAACGAACTCGATCTCAGTGGGATGTTCTTTCTGATGGAAATGTAATTCAAGAGGTTGCTCATATCGCAAATGGATCACATCCAGGAAACTGCATATCGATTCTTCGAGTGGTCCGAGAGTCAAATGGCAGCGAAGAAAATTTAACAAACCCAATTGAGATACCACCTCCTCGGCCAAAGAAGAAACCACTGCATCCTTACCCTCGAAAGTCACTCAATTCACTTAAGGTGAAACTAGTTCCAAAACAAGCACAAAGGTCTCCATCCCCAAATTTAGCAGTTGCAGACAAAGAGATCCAATCGCCCACCTCAATATTGACTGCATTTAGTTCTGAAGAAATTGGGTCTGTAGGAACAGAGCAGAGTAATAGATGTGTTTCACCCTCACTCACATCATGTACTTCTCACGTGCCCTTTATCACTTTGTCACCAGTTCAGAAGGGCTGTGATTATGTTACATCGGGCTCATCCGAAGAACAAGTAAAGGGATCATTGTTGTCACTTAACCTTGCCGCTAATTTGACATTGGAACTTGCGTCGGCTTTTGAGAATAATGAATCTGTAAAAGAGGATTCTGCAACACGATCATCTGTTACTAGTATTAAGCTTTTTGGAAGTACAGTTTTAGTGACAGACTCCAAGCATCCATCTTCTCAAACATCACCGACCTCTAAGAGTGGTCAAGACGATTATGCTCTTCGTGAGAAACTATTCCGAACATCAACATATACCGAGCTCCATAAATGGAATTTCATCCCTTTTGTAGCTCCAATTAACATAGAAGGATATGAACAGAAGAACTTCTACCCAGTGGAATCACGCTCAAATGCTACTTCACCATTCTGGTCTTTTTGCAATGGGCTACCGTATTTCAAGACAGTTTGTGATCAAACCTCATTTCAAGCATGCACAAATTCACAGCCGGAAGTAAGGATGAAAGAGGAAAGCCCCAAAGAGAGATCTTGCACAGGTTCGAATTATGGGTCATCTACTAAAGTAGAAGATGAGGAGAAGAATATAGAGGCAGTTGACTCTCAACGTCAAGAGACTAGTATTGAGAGAAAAACAAGCACCCGCAACCAGCATTCAAATAAGGGTTTTGTACCTTACAAAAGATGTTTGGGAAAAACAAGCTCATTTCTGAGTGTTTCAGATGAGAGAGAGAAGCAGAAAGCTCGAATATGCTAA 2685 43.43 MFTECPHPDEKQRMQLSRELGLAPLQIKFWFQNRRTQMKTQHERADNCCLRAENEKIRFENIAIREALKNLICPCCGGPPLTEDSYFDEQKLRLENSQVSSIASKHMGRPIPQLPPVHPIHISSLELSMGNFGTSGPSLDLDLLPGTSSTGRSLPFQSIGLSDEDKSLMADIAAHSMEELIELAQSNELLWMKSSTHGKDVLNLENYDRIFPKPTVRLKNPHLRIEASRDSGVVIMNSLTLVDMFMDSNKTMELFPGIISSARTMEVISSGLLGSHSGTLLLMHEELQVLSPLVPTREFYFLRYCQQINQELWAICNVSYDFPGENGFGSQFQSRRLPTGCLIQDMANGHSKVIWVERVEIEDKNPPHRLYRDLFYGGIAFGAERWVATLQRMCERFSSSMAAANSARELEGDFSVIFSPDGKRSTMKLAQQMINNFCASISTSNGHRWTTLSGQNEVGVRVTVNKSNNPGQPNGVVLSAASTIWLPVSPQDVFNFFRDERTRSQWDVLSDGNVIQEVAHIANGSHPGNCISILRVVRESNGSEENLTNPIEIPPPRPKKKPLHPYPRKSLNSLKVKLVPKQAQRSPSPNLAVADKEIQSPTSILTAFSSEEIGSVGTEQSNRCVSPSLTSCTSHVPFITLSPVQKGCDYVTSGSSEEQVKGSLLSLNLAANLTLELASAFENNESVKEDSATRSSVTSIKLFGSTVLVTDSKHPSSQTSPTSKSGQDDYALREKLFRTSTYTELHKWNFIPFVAPINIEGYEQKNFYPVESRSNATSPFWSFCNGLPYFKTVCDQTSFQACTNSQPEVRMKEESPKERSCTGSNYGSSTKVEDEEKNIEAVDSQRQETSIERKTSTRNQHSNKGFVPYKRCLGKTSSFLSVSDEREKQKARIC 894
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 11749222 11757476 - Bda024187.1 Bda06g00850 8432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00850 894 SUPERFAMILY Homeodomain-like 1 44 IPR009057 -
Bda06g00850 894 ProSiteProfiles 'Homeobox' domain profile. 1 41 IPR001356 GO:0003677
Bda06g00850 894 SUPERFAMILY Bet v1-like 163 398 - -
Bda06g00850 894 SUPERFAMILY Bet v1-like 420 533 - -
Bda06g00850 894 Pfam START domain 172 396 IPR002913 GO:0008289
Bda06g00850 894 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ROC8 2 541 - -
Bda06g00850 894 CDD homeodomain 2 42 IPR001356 GO:0003677
Bda06g00850 894 MobiDBLite consensus disorder prediction 810 863 - -
Bda06g00850 894 Coils Coil 832 852 - -
Bda06g00850 894 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 2 541 IPR042160 -
Bda06g00850 894 Pfam Homeodomain 1 39 IPR001356 GO:0003677
Bda06g00850 894 Gene3D - 1 53 - -
Bda06g00850 894 ProSiteProfiles START domain profile. 162 399 IPR002913 GO:0008289
Bda06g00850 894 MobiDBLite consensus disorder prediction 545 567 - -
Bda06g00850 894 ProSitePatterns 'Homeobox' domain signature. 16 39 IPR017970 GO:0000981|GO:0006355
Bda06g00850 894 SMART START_1 171 396 IPR002913 GO:0008289
Bda06g00850 894 Coils Coil 670 690 - -
Bda06g00850 894 MobiDBLite consensus disorder prediction 830 859 - -
Bda06g00850 894 CDD START_ArGLABRA2_like 166 395 - -
Bda06g00850 894 SMART HOX_1 1 45 IPR001356 GO:0003677
Bda06g00850 894 Gene3D - 170 374 IPR023393 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00850 Bda-Chr6:11749222 Bda14g00713 Bda-Chr14:5378449 5.34E-167 dispersed
Bda06g00850 Bda-Chr6:11749222 Bda13g00620 Bda-Chr13:7230664 2.39E-168 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16039 PF01852 START 1.40E-42 CL0209 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00850 K09338 - mnt:21407821 821.231