Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00851 ATGGCTGGTGTTGATAAAGATGATGTTCCAATGCTATCAGACACAAACCCATCATTATATGATGAACAAATGAATTCTCGATTTCAGTCATTCAATTCAGCTTCAAGAAGTTCGTCAATTTCAGTTCCAATCAATATCATTTCTACCTACGAGTGCGAACTCGCTGGCTATACCGGCCCTCTACGGAGTGAAAGAATAGCTCCTTTTCCACAGATGAGGGGAAAAGAATCAACGGCCGAAAATATTCGACCTTGGGAAGGAAAGAGCAGGGCAGGTTGGTCCAATAGAAACAATGATGGAAAAAATCAACATTTATTGCGGTCTGGTCGGTTGGGACGATGTAGTGATCCTTATTGCACAACTTGTCCAACCTACAATGTTAAAACTGCACAGCAGAAGAGTTCAAGAGGCTCTGGCTTATTTGAACACAAGTTTCACAATGCTCTTTACAAAGGCTGTGCTGGGAAGTTTTGGTCCTTTATGAATCCATATATTCCTGGAGTGATGAATCCTCATACAAAGATTATCCAAAAGTGGAACAAGTTTTTTGTTATTGCTTGCTTAGTGGCGATTTTTTTCGACCCTTTATTTTTCTTCATACTTTCTGTCAATCAGGATAATAAGTGCATAGTTTTAGATTGGCCCATGACTAAAGCACTGGTGGTTTTCAGAAGCATGACAGATATTATTTACCTTCTCCACATCCTTCTTCAGTTTAGGTTGGCTTATGTGGCTCCTGAATCTACAGTAGTTGGAGCAGGAGAATTAGTGGACCATCCAAAGAAAATTGCTCTGAATTACCTTAAGAGTTTCTTTTTTGTTGACTTATTTGTAGCATTGCCACTTCCTCAAATTATAGTTCTATTGATACTACCAAAATCGCTAGGATCGTCTGGAGCAAACTATGCGAAAAATCTTTTACGTGCAGCAGTTCTTGTGCAATACATACCCAGATTGTTTAGATTTTTGCCGCTTCTGGTCGGTCAGTCTCCAAATGGCTTCATATTTGAGACTGCATGGGCCAATTTTGTTCTCAATCTTTTCACTTTCATGTTGTCTGGCCACGTCATCGGCTCTTTCTGGTACCTCTTTGGATTACAGAGGGTCAACCAATGTCTTCGAATTGCCTGCCGAAACTCTGGAATTCAATCGTGCCCGATATTTATAGATTGTGGACATGGGGATGATGTTAACAGATTTGATCTTTATCCAACTTGGAACAACTGGACAAGCAATGATAATGCTACCTCATGCTTTACTTCAACTGGCTATCCTTATGGAATTTACATTCAAGCCGTCAGTCTAGTCTCGGAAAGTACGATACGAAGATACGTTTACTCCCTTTTTTGGGGATTTCAGCAAATCAGTACTCTTGCTGGGAATCAAGTTCCAAGCTTTTTTGTGTGGGAAGTTCTTTTCACTATGGCAATTATTGGACTTGGTCTTTTGTTATTTGCTCTACTTATTGGAAATATGCAAAACTTCCTCCAGGCTCTCGGTCAAAGGAGGTTACAAATGTCGTTAAGACGCCGTGACGTCGAGCTGTGGATGGCACATCGGCGTTTGCCCGTCGAGCTAAAAAAGCAAGTACGGGAAGCCGAAAGGTACAGTTGGGCTGCAACGAGAGGCGTAAACGAAGAAACACTCTTGGTGAATTTGCCCGAAGATCTTCAAAGAGATATACGACGCCATCTCTTCAAGTTCTTAAAGAAAGTTAGGATTTTTTCTTTGATGGACGAACCGATTTTAGATTCAATAGGGGAGAAACTGAGACAAAGGACATATATACAAGGAAGTGAAGTTTTTTTCAAAGGCGGTCTCGTCGAGAAGATGGTTTTCATCGTTAGAGGAAAAATGGAGAGTTTGGGGGCCGACGGGATCGTGGTCCCGTTGTCGGAAGGAGACGTTTGTGGGGAAGAACTTCTAGGATGGTGTCTTGAACATTCGTATGTGAATAGAGACGGAAGAAGAACTGGGATTGCCGGACCGAGGTTGGTCAGCACTCGGACGGTGAGTTGCACGACGAATGTGGAAGCGTTTTCTCTCCACGTTGCCGATCTTGAACAAGTGACAAGTGTTTTTACAAGATTCTTGCGAAATCATCGTGTTCAAGGAGCCATACGATATGAATCTCCCTACTGGAGAAGCTTAGCAGCAAATCGGATTCAAGTCGCATGGAGATACCGGAAAAAACGTCGAATTCGAGCCGACTGGGGTTGA 2220 42.25 MAGVDKDDVPMLSDTNPSLYDEQMNSRFQSFNSASRSSSISVPINIISTYECELAGYTGPLRSERIAPFPQMRGKESTAENIRPWEGKSRAGWSNRNNDGKNQHLLRSGRLGRCSDPYCTTCPTYNVKTAQQKSSRGSGLFEHKFHNALYKGCAGKFWSFMNPYIPGVMNPHTKIIQKWNKFFVIACLVAIFFDPLFFFILSVNQDNKCIVLDWPMTKALVVFRSMTDIIYLLHILLQFRLAYVAPESTVVGAGELVDHPKKIALNYLKSFFFVDLFVALPLPQIIVLLILPKSLGSSGANYAKNLLRAAVLVQYIPRLFRFLPLLVGQSPNGFIFETAWANFVLNLFTFMLSGHVIGSFWYLFGLQRVNQCLRIACRNSGIQSCPIFIDCGHGDDVNRFDLYPTWNNWTSNDNATSCFTSTGYPYGIYIQAVSLVSESTIRRYVYSLFWGFQQISTLAGNQVPSFFVWEVLFTMAIIGLGLLLFALLIGNMQNFLQALGQRRLQMSLRRRDVELWMAHRRLPVELKKQVREAERYSWAATRGVNEETLLVNLPEDLQRDIRRHLFKFLKKVRIFSLMDEPILDSIGEKLRQRTYIQGSEVFFKGGLVEKMVFIVRGKMESLGADGIVVPLSEGDVCGEELLGWCLEHSYVNRDGRRTGIAGPRLVSTRTVSCTTNVEAFSLHVADLEQVTSVFTRFLRNHRVQGAIRYESPYWRSLAANRIQVAWRYRKKRRIRADWG 739
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 11759153 11764578 - Bda024188.1 Bda06g00851 8433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00851 739 Pfam Ion transport protein 179 502 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bda06g00851 739 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 5 736 - -
Bda06g00851 739 MobiDBLite consensus disorder prediction 1 20 - -
Bda06g00851 739 ProSiteProfiles cAMP/cGMP binding motif profile. 574 642 IPR000595 -
Bda06g00851 739 Gene3D Jelly Rolls 572 696 IPR014710 -
Bda06g00851 739 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 20, CHLOROPLASTIC-RELATED 5 736 - -
Bda06g00851 739 Gene3D Helix hairpin bin 500 566 - -
Bda06g00851 739 CDD CAP_ED 574 690 IPR000595 -
Bda06g00851 739 SMART cnmp_10 574 709 IPR000595 -
Bda06g00851 739 Gene3D - 180 499 - -
Bda06g00851 739 SUPERFAMILY cAMP-binding domain-like 502 698 IPR018490 -
Bda06g00851 739 MobiDBLite consensus disorder prediction 85 106 - -
Bda06g00851 739 SUPERFAMILY Voltage-gated potassium channels 171 503 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00851 Bda-Chr6:11759153 Bda12g00522 Bda-Chr12:7998729 1.00E-126 dispersed
Bda06g00851 Bda-Chr6:11759153 Bda15g00779 Bda-Chr15:11637413 2.94E-135 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00851 K05391 - jre:109012085 1031.17