Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g01082 ATGGCGGCCATTACGCTTTGGTGGGGAGTCGTTTTCTTTGTTTTTTCTCTTTCTCGCTCGTTTGCTCTTACTTCAGATGGTGTGCTCTTGCTATCTTTTAAGTATTCTGTTCAGGGTGATCCGTTTTCAGTTTTAGAGAAATGGGATTATAATGACGAGTCACCATGCTCATGGAAGGGAGTTTTTTGCTCGAAAATGGGAATCTCCGGTACACCAGACATGTTCAGGGTCACGGGGTTAGTACTTTCTGGCAACCAACTTCTGGGTTTGATTCCGGAAGAGCTTGTAATGATCGAACACCTCCGCCACCTCGACCTCTCTGGTAATTTCTTCAATGGGTCTTTGCCCGTTTCCATTTTCAACGCCTCCGAACTACAGTTTCTCTCTCTCTCAAAGAATGGACTCTCCGGCGAGTTACCGGAGCTAATCGGGGGTCTCAAAGGCCTGCAGCTTCTCAATCTCTCCGACAATGCTTTTTCCGGGAGGATCCCGGGAAACCTCACCGTCTTGCAGAATCTCACCGTTGTTTCTCTGAAGAGTAATTACTTTTCCGGCGACATCCCCGGAAATTTTCTGGACGTCGAGGTCTTAGATCTGTCTTCGAATTTGCTGAACGGGTCTCTCCCGTTAGATTTCGGTGGAGATAATTTGCGATATTTGAATCTTTCTTTCAACAAGTTTTCAGGGATAATTCCACCTGAATTTGCTAAGAGCATACCCATAAATTCCACCATTGATCTCTCTTTCAACAATCTCAGTGGAGCTATTCCGGAGTCTATGACTCTGCTTAATCAGACAACAGAGTCCCTCGCCGGAAATGAAAACCTCTGCGGAAAACCATTGAAGAATCTCTGCTCCATTCCGTCTTCTCTTTCGACCCCACCTAACGTCTCCACATCTTCTCCGGCGATTGCCGCAATACCCAAAACAATCAGCTCAAGCCCAGTCACCTACACAACACAAACACAAACAAAAACCAAAAGTGGCCTAAAACCTAGCACAATTGCCGGGATTGTCGCGGGAGACCTCGCCGGGTTATTGTTACTATCTATTATTATTCTGTACGTTTACCAGAAGAGAAAAAATCTCAAAAATCCATCAAACCCAGAAAAGAAACTGCAAATTTCGCCAAATAAAGATCACCCAGACGTCAACTCAAGCAAAAAAAGAGTAGCGTGCCCCTGTTTAGTGATCAAAAGCGAAGAGACATCGGAAGCAACGAGTTCCGACAGCGAAGAACTCAAATACAGAACTGAAGAAGCAGAAAACGGAAACGAAGAAGGTGGGCACTACAAGAAAAATGGAGTACTGGTTACAGTAGACGGAGAAACAGAGCTTGAGATGGAGACGTTGTTAAAAGCTTCAGCCTACATTTTGGGAGCGAGTGGTGAAAGCATAGTTTACAAGGCCGTGGTTGAAGATGGAACGGCCTTAGCTGTAAGAAGAATTGCAGAAAGTGGAGTCGAGAGAGTAAGAGATTTTGAGAACCAGGTGAGAGGCATCGCCAAGCTTAAGCACCCCAATTTAGTCAGAGTTCGTGGTTTTTACTGGGGAAAGGATGAAAAGCTTATTATTTGTGATTACGTCAGCAATGGCAGCCTGGCTACGTCCACTTTCACAAAGTCGGGATTGTCGCCTTCGCACTTATCTCTCGAGGTCAGGTTGAAGATCGCGAGAGGGATCGCAAGAGGGCTGGCTTTTATTCACGAAAAGAAGCACGTTCATGGCAATATAAAACCCAGTAACATTCTTCTGAACTCCGATATGGAACCATTGATTAGCGATCTCGGCTTAGGGAGGCTTGTTTTCGGCGAGACGAGCAGCAAGGCCAACGGCGCTGGCTCTTGCTCGGGCTCGGCCACCAAGTATTTCGGAAGCCAAAGGTTTAACAACCCCCGAGAAGTAGGAGTTCACGATGGGCCCATCAATGGCAGCCCGGGAAGCTCGACCCTTAGCTTTTCTGCGACTTACCAGGCGCCCGAGTCGCTGAAGAACCTCAAACCGAACCCGAAATGGGATGTTTATTCGTTTGGTGTCGTCTTGCTCGAGCTTCTAAGCGGCAGAGCCTTCGTGGAGGCTGAGCTGGCGCAATGGACTGCCGTGTTGCTGTCGGAGGACAAGAGTCGGGTGACGAGGATGGTTGACGTGGCGGTACGTGGTGACGTGGTGGGACGGGAGGATGCCATACAGGCTTGTTTCAGATTGGGATTCAGTTGTGTTTCGTTCCTGCCTCAAAAGAGACCTACTATGAAGGAGGCTCTTCAGGTTCTTGACAAAACCCTCCTTCCTCACGTTGGTTAA 2301 47.63 MAAITLWWGVVFFVFSLSRSFALTSDGVLLLSFKYSVQGDPFSVLEKWDYNDESPCSWKGVFCSKMGISGTPDMFRVTGLVLSGNQLLGLIPEELVMIEHLRHLDLSGNFFNGSLPVSIFNASELQFLSLSKNGLSGELPELIGGLKGLQLLNLSDNAFSGRIPGNLTVLQNLTVVSLKSNYFSGDIPGNFLDVEVLDLSSNLLNGSLPLDFGGDNLRYLNLSFNKFSGIIPPEFAKSIPINSTIDLSFNNLSGAIPESMTLLNQTTESLAGNENLCGKPLKNLCSIPSSLSTPPNVSTSSPAIAAIPKTISSSPVTYTTQTQTKTKSGLKPSTIAGIVAGDLAGLLLLSIIILYVYQKRKNLKNPSNPEKKLQISPNKDHPDVNSSKKRVACPCLVIKSEETSEATSSDSEELKYRTEEAENGNEEGGHYKKNGVLVTVDGETELEMETLLKASAYILGASGESIVYKAVVEDGTALAVRRIAESGVERVRDFENQVRGIAKLKHPNLVRVRGFYWGKDEKLIICDYVSNGSLATSTFTKSGLSPSHLSLEVRLKIARGIARGLAFIHEKKHVHGNIKPSNILLNSDMEPLISDLGLGRLVFGETSSKANGAGSCSGSATKYFGSQRFNNPREVGVHDGPINGSPGSSTLSFSATYQAPESLKNLKPNPKWDVYSFGVVLLELLSGRAFVEAELAQWTAVLLSEDKSRVTRMVDVAVRGDVVGREDAIQACFRLGFSCVSFLPQKRPTMKEALQVLDKTLLPHVG 766
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 38360976 38363968 - Bda022853.1 Bda06g01082 8664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g01082 766 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 19 760 - -
Bda06g01082 766 Pfam Protein kinase domain 459 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g01082 766 Gene3D Transferase(Phosphotransferase) domain 1 529 762 - -
Bda06g01082 766 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Bda06g01082 766 Gene3D Ribonuclease Inhibitor 192 287 IPR032675 -
Bda06g01082 766 Gene3D Ribonuclease Inhibitor 24 191 IPR032675 -
Bda06g01082 766 MobiDBLite consensus disorder prediction 364 387 - -
Bda06g01082 766 SUPERFAMILY Protein kinase-like (PK-like) 458 759 IPR011009 -
Bda06g01082 766 Gene3D Phosphorylase Kinase; domain 1 427 528 - -
Bda06g01082 766 ProSiteProfiles Leucine-rich repeat profile. 216 237 IPR001611 GO:0005515
Bda06g01082 766 Pfam Leucine Rich Repeat 100 118 IPR001611 GO:0005515
Bda06g01082 766 Pfam Leucine Rich Repeat 216 236 IPR001611 GO:0005515
Bda06g01082 766 ProSiteProfiles Protein kinase domain profile. 453 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g01082 766 PANTHER OS04G0122200 PROTEIN 19 760 - -
Bda06g01082 766 SUPERFAMILY L domain-like 24 282 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g01082 Bda-Chr6:38360976 Bda11g00159 Bda-Chr11:2076684 6.46E-141 dispersed
Bda06g01082 Bda-Chr6:38360976 Bda14g00224 Bda-Chr14:1519843 9.14E-67 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69681 PF00069 Pkinase 1.90E-29 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g01082 - - rcu:8288124 875.544