Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g01090 ATGCTTCGGAGGAGGGGTCTTCGCGTTCTAATGATTGTGTTTGTGGCTATGATTGCTGAAATTGTGGTGGCAAAGAGTAAGGTTCATATTGTGTACATGGGAGAGAGGCAGCAGCGCCATGACCCGGAGATCGTCAGTCGCTCGCATCATCGGTTGCTGGCCGATTTGCTCGGAAGCAACGAGAGGGCTAAGGAATCGTTGATTTATAGTTACAGACATGGATTTTCTGGGTTTGCAGCCAAGCTCACAGAGTCTCAGGCGAAAGAGCTCTCTGAGATGTCTGGAGTTAATTTTGTCATACCAAATAGCATTTATAAGCTTCAAACAACAAGGAGCTGGGATTTCCTCCAACTCTCTTCTGATTCTCCTTCCAATCTTCTTCAAACCGGCAACTTCGGCAAGGATCTAATTATAGGCGTTCTCGATACCGGAATTTGGCCACAGTCTCGATCTTTCGCTGACAACGAACAAGGACCGATTCCATCGCGATGGAAAGGTGGGTGTGATTCCGGAGACCAGTTTGACCCCAACACTGACTGCAATCGAAAAATCATTGGCGCCAGATGGTACGTTGACGGGCTCACCGCCGAAATTGGGCAGCCGTTAAACACCTCTGAAATTGTAGAATTCTTCTCTCCTAGAGACGCCAATGGGCACGGCACCCACGTAGCTAGCACAGCGGCCGGCTCTTTCGTCTCCAACGTCAGCTACAGAGGTCTGGCCGCCGGCACTGCAAGAGGAGGCGCCCCCCTCGCCCGCTTGGCCATCTACAAGGTCTGTTGGAATTTCAAGGGAGGCCAGTGCGGATCCGCTGACATACTCAAGGGTATTGATGAAGCCATTCATGATGGCGTTGATGTGTTGTCTCTTTCGCTTGGTCAACCGGTTCCTCTGCTGTCAGATGTTGATCATCGGAACGCCGTTGCCATCGGATCCTTCCATGCTGTTGCTAGAGGCATCACCGTTGTTTGTGCCGGTGGAAATGAAGGGCCTTCAACTCTTTCCGTCTCCAACACGTCGCCTTGGGTCATCACCGTCGCTGCAAGCACGGTCGATCGATCTTTTCCGACCTCCATTACCCTCGCAAACAACGAGACTTTGACGGGTCAAGCTTTGTTTGCTGGCACCGAGGTGGATTTTGCAGGATTGTTCTTCCCGGAGGCTGACGACTTTAACCCCAATGCTAATAGTGTTTGTGAATCTCTCTCTCTCGATGAGAGTATGGTAGCTGGTAAGGTGGTGCTTTGCTTCACTACATCCTCTCGCAGTTCATCTGTTATTTCCGCCCAATCGGCCGTGAAAGCAGCAGGCGGCGTTGGGGTGATCGTAGCCAAGAATCCGGCCAACGTTGTTACGGCATGCGATCATGGTAGTTTCCCATGCATTCAAGTTGACTACGAGATTGGTACTAGATTACTCTTCTACTTTCGCTCCACCAGTTCTCCAAAAGTGAAGTTGAGCACTTCCAGAACCGTAGTGGGCAAGCCTGTCTCAGCCAGTGTCTCCTATTTCTCGTCTCGAGGGCCTAACTCGGTGGCGCCTGAGATTCTGAAACCAGACATAGCAGCACCTGGTGCTAACATACTGGCCGCCACTTCTCCCATCAAATGGGGAAGTATCGGCGGGTACTCAATCATCTACGGAACTTCAATGGCTACTCCTCACGTCTCCGGCATCGTGGCGCTTCTCAAATCCGTCCACCCTGGTTGGTCTCCAGCCGCACTTAAATCTGCTCTTGTCACGACAGCGTGGAACCACGACCCATCTGGGTTACCCATTTTCGCCGATGGTGCCACCAGAAAGCCTGCCGATGCATTCGACTACGGAGGTGGAATTGCTAATCCGAACGGAGCTGCCCGCCCTGGTTTGGTCTATGACATGGACACCGGCGACTACCTACGCTACCTCTGTTCTATGGGCTACAACAGTAACGGGATATCTGGACTAGCACGCCATCGGACGACTTGCCCGTCGGAGAAGTCATCTCTAACGAACCTAAACTTTCCTTCCATCACAATCCCAAGGCTCACAAACTCTACCACCGTGAGGAGGACGGTGACAAATGTCGAAAAATATGGGTCAATCTACAGAGCGACGGTTGAGGCTCCGATGGGAACTACGGTTCAGGTGAGACCTCAGGTTTTGTCCTTCACTCCCGCCGTGGAGAAACTGTCGTTTGAGGTTATTATCTCTACGAGACAGCCGGTGTACGGAGGTTATACGTTCGGGAGCCTCACTTGGTCCGACGGAGTCCATGTCGTTAGAATTCCCTTGTCCGTCCGAATAGAGATTCCACCTAGAGCTTATACATAG 2313 51.71 MLRRRGLRVLMIVFVAMIAEIVVAKSKVHIVYMGERQQRHDPEIVSRSHHRLLADLLGSNERAKESLIYSYRHGFSGFAAKLTESQAKELSEMSGVNFVIPNSIYKLQTTRSWDFLQLSSDSPSNLLQTGNFGKDLIIGVLDTGIWPQSRSFADNEQGPIPSRWKGGCDSGDQFDPNTDCNRKIIGARWYVDGLTAEIGQPLNTSEIVEFFSPRDANGHGTHVASTAAGSFVSNVSYRGLAAGTARGGAPLARLAIYKVCWNFKGGQCGSADILKGIDEAIHDGVDVLSLSLGQPVPLLSDVDHRNAVAIGSFHAVARGITVVCAGGNEGPSTLSVSNTSPWVITVAASTVDRSFPTSITLANNETLTGQALFAGTEVDFAGLFFPEADDFNPNANSVCESLSLDESMVAGKVVLCFTTSSRSSSVISAQSAVKAAGGVGVIVAKNPANVVTACDHGSFPCIQVDYEIGTRLLFYFRSTSSPKVKLSTSRTVVGKPVSASVSYFSSRGPNSVAPEILKPDIAAPGANILAATSPIKWGSIGGYSIIYGTSMATPHVSGIVALLKSVHPGWSPAALKSALVTTAWNHDPSGLPIFADGATRKPADAFDYGGGIANPNGAARPGLVYDMDTGDYLRYLCSMGYNSNGISGLARHRTTCPSEKSSLTNLNFPSITIPRLTNSTTVRRTVTNVEKYGSIYRATVEAPMGTTVQVRPQVLSFTPAVEKLSFEVIISTRQPVYGGYTFGSLTWSDGVHVVRIPLSVRIEIPPRAYT 770
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 38852391 38856535 + Bda022866.1 Bda06g01090 8672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g01090 770 Pfam Fibronectin type-III domain 665 760 IPR041469 -
Bda06g01090 770 CDD Peptidases_S8_3 105 584 IPR034197 -
Bda06g01090 770 ProSitePatterns Serine proteases, subtilase family, serine active site. 548 558 IPR023828 -
Bda06g01090 770 Gene3D - 636 763 - -
Bda06g01090 770 Gene3D - 352 493 - -
Bda06g01090 770 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 108 IPR037045 -
Bda06g01090 770 SUPERFAMILY Subtilisin-like 107 623 IPR036852 GO:0004252|GO:0006508
Bda06g01090 770 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Bda06g01090 770 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Bda06g01090 770 PRINTS Subtilisin serine protease family (S8) signature 547 563 IPR015500 -
Bda06g01090 770 Gene3D Peptidase S8/S53 domain 135 632 IPR036852 GO:0004252|GO:0006508
Bda06g01090 770 ProSitePatterns Serine proteases, subtilase family, histidine active site. 219 229 IPR022398 -
Bda06g01090 770 ProSiteProfiles Serine proteases, subtilase domain profile. 112 619 - -
Bda06g01090 770 CDD PA_subtilisin_like 358 486 - -
Bda06g01090 770 Pfam Subtilase family 133 588 IPR000209 GO:0006508|GO:0008236
Bda06g01090 770 PANTHER PEPTIDASE S8 17 763 - -
Bda06g01090 770 PANTHER SUBTILISIN-LIKE PROTEASE SBT3.1-RELATED 17 763 - -
Bda06g01090 770 Pfam Peptidase inhibitor I9 28 107 IPR010259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g01090 Bda-Chr6:38852391 Bda08g00958 Bda-Chr8:18725052 0 dispersed
Bda13g01443 Bda-Chr13:37164700 Bda06g01090 Bda-Chr6:38852391 7.49E-14 dispersed
Bda06g01088 Bda-Chr6:38811288 Bda06g01090 Bda-Chr6:38852391 7.44E-39 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g01090 - - qsu:112005666 950.658