Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g01096 ATGGAGATTAATCTCTCATCCAACATAGATCGCAAAGAAGAATCAAAATTAGGAAAACTAAGAGGAGAAGATGAAAGAGATCGTGTAGTTGACGCAGATGGTCAAAACCCGGAACAGCAACCGCCGCCGCCGGCGCATGCTGAAGAGGCGACTGAAACGACGGTCGGAGAAGTGGACGACGATGCATTCATGGTCGGACTGTCCTTGCGAGATAAAATGAAAGCAGAAGAGTTAGCTGCGTTGCAGGTGGAGATGGAGAGAATGAAAGAAGAAAATATTGGGTTGAGGAAGGTGGTGGAGAAAATTATGAAAGACTACTACGATCTTAAAATGAAATTCTCAGTTATTCAACAAAACAGCCAAGAACAGGATCGGAACCAGACCTATTTCTCTCCATCAAACGGAGGGGAGACAAGAGAGAGCGATCTAGGGTTGACACTGAGCTTAAACTACGCAACTTCAGAAAGAAAAGATGAAGATAAACAAAAGACTGTAGAAGAAATGACGAGTTCGCCATTAATGGAGGAAAACAAGCTTCAGATCAGGACTGAATTGCCTGGAATTACCACCCATGTATCCTCTCCTCCGAACAGAAAAGCGAGGGTTTCTGTTAGAGCAAAATGTGAAGCAGCCACAATGAACGATGGTTGTCAATGGAGAAAATATGGGCAGAAAGTTGCGAAAGGAAACCCTTGTCCTCGAGCCTACTACCGCTGCACGGCAGCTCCGGGATGTCCAGTTAGAAAACAGGTGCAAAGATGCTTGGAAGACATGTCCATTCTGATAACAACGTACGAAGGAAATCATAATCATCCACTTCCAGTTGGTGCAACAGCCATGGCCTCCACAGCTTCTGCAGCTGCTTCATTTACCTTATTGGACGCACCAGAAGCTTCTGCTTTCAACTCATCTTCTCAATCTTCAAAACCCTTCAACAGCGTCATTTCCGATGAGCCATATCCTGGAAGTTTTTTTGATCTCACAAAAAATTTGCATGATTCCTCATATTTCCCATCAAATTCAGTGCAATTTCCGGGTTATAGTTGGGTTCAAGGCAAACCAAGTTACCTCAATGGAAGTTTTATGGGAAATAATCCATTTCCTAGCTTCAGAAATGTGGATCAAAAGGCATTAAAAGAAGGAGGAAATCAATCACTGGCCGAAAATCTTTCCTCCGTCATCGCGTCGGACCCGAAATTTCACGTGGCGGTTGCAGCTGCCATTACCTCCCTTATGAACAAAGAGAGCAATTCAGATCATCCACTCATAGGAAGTGATTATGGTCCGAGAGCCGGATCGATCGGCTGGTTTGTCGACTCCATTGTATCGAAAGACAAGTAG 1341 44.37 MEINLSSNIDRKEESKLGKLRGEDERDRVVDADGQNPEQQPPPPAHAEEATETTVGEVDDDAFMVGLSLRDKMKAEELAALQVEMERMKEENIGLRKVVEKIMKDYYDLKMKFSVIQQNSQEQDRNQTYFSPSNGGETRESDLGLTLSLNYATSERKDEDKQKTVEEMTSSPLMEENKLQIRTELPGITTHVSSPPNRKARVSVRAKCEAATMNDGCQWRKYGQKVAKGNPCPRAYYRCTAAPGCPVRKQVQRCLEDMSILITTYEGNHNHPLPVGATAMASTASAAASFTLLDAPEASAFNSSSQSSKPFNSVISDEPYPGSFFDLTKNLHDSSYFPSNSVQFPGYSWVQGKPSYLNGSFMGNNPFPSFRNVDQKALKEGGNQSLAENLSSVIASDPKFHVAVAAAITSLMNKESNSDHPLIGSDYGPRAGSIGWFVDSIVSKDK 446
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 38953946 38955645 + Bda022873.1 Bda06g01096 8678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g01096 446 SMART WRKY_cls 213 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda06g01096 446 MobiDBLite consensus disorder prediction 1 53 - -
Bda06g01096 446 Pfam WRKY DNA -binding domain 214 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda06g01096 446 PANTHER WRKY TRANSCRIPTION FACTOR 9-RELATED 135 418 - -
Bda06g01096 446 ProSiteProfiles WRKY domain profile. 208 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda06g01096 446 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 135 418 IPR044810 GO:0003700
Bda06g01096 446 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 2 126 IPR044810 GO:0003700
Bda06g01096 446 MobiDBLite consensus disorder prediction 1 33 - -
Bda06g01096 446 Coils Coil 71 98 - -
Bda06g01096 446 MobiDBLite consensus disorder prediction 118 141 - -
Bda06g01096 446 PANTHER WRKY TRANSCRIPTION FACTOR 9-RELATED 2 126 - -
Bda06g01096 446 Gene3D WRKY domain 198 275 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda06g01096 446 SUPERFAMILY WRKY DNA-binding domain 207 274 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g01096 Bda-Chr6:38953946 Bda15g00959 Bda-Chr15:17679033 1.16E-57 dispersed
Bda06g01096 Bda-Chr6:38953946 Bda15g00953 Bda-Chr15:17560389 1.88E-59 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16056 PF03106 WRKY 1.80E-24 CL0274 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g01096 - - gmx:100820209 383.259