Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g01100 ATGTCCGAGGTAGATGAGGAGTCTAAGCAAGTTTCTTACAGAGTAGTACGTGATGAAAATGGAAACGTTAAGCTTGACTGCCCAGCCATTGGGAAACAGTTCGCCGCTGAAGAAATTTCTGCTCAGGTTTTAAGGAAGCTTGTAGATGATGCTTCAAAGTTTTTGAATGATAAAGTAACTAAAGCAGTGGTGACAGTTCCTGCTTACTTCAATGACTCCCAAAGAACGGCAACTAAAGATGCTGGTCGCATTGCCGGGTTAGAAGTTTTGCGTATTATTAATGAGCCTACTGCTGCTTCACTAGCTTACGGGTTTGAAAGGAAAAACAATGAGACCATCTTAGTCTTTGACCTTGGAGGTGGTACTTTTGATGTCTCAGTTCTCGAGGTTGGTGATGGAGTGTTTGAAGTGCTTTCTACTTCTGGGGATACACATTTGGGTGGTGATGATTTTGACAAGAGAGTTGTTGATTGGCTTGCTGGAAACTTCAAGAGAGATGAAGGTATAGATCTATTAAAGGACAAACAAGCTCTTCAAAGGCTTACAGAGACAGCTGAGAAAGCTAAAATGGAATTATCATCTTTGACTCAAACGAATATAAGTTTGCCCTTCATCACTGCCACTGCAGATGGCCCCAAGCACATTGAGACCACTCTTACGAGAGCGAAGTTTGAGGAATTGTGCTCCGATTTGCTTGATAGGCTAAGAACTCCTGTTGAGAATTCTTTGAGAGATGCAAAACTTGCTTTCAAGGATTTAGATGAAGTTATCTTAGTTGGTGGCTCAACACGTATACCAGCTGTTCAAGAGCTTGTGAAGAAGTTGACTGGAAAGGATCCCAACGTCACAGTGAATCCTGATGAAGTTGTCGCATCTAGGGGCTGCTGTTCAGGCTGGTGTACTGGCTGGAGATGTCAGTGA 921 42.89 MSEVDEESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAQVLRKLVDDASKFLNDKVTKAVVTVPAYFNDSQRTATKDAGRIAGLEVLRIINEPTAASLAYGFERKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRVVDWLAGNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIETTLTRAKFEELCSDLLDRLRTPVENSLRDAKLAFKDLDEVILVGGSTRIPAVQELVKKLTGKDPNVTVNPDEVVASRGCCSGWCTGWRCQ 306
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 39178313 39180185 + Bda022881.1 Bda06g01100 8682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g01100 306 Coils Coil 171 198 - -
Bda06g01100 306 Gene3D - 104 285 - -
Bda06g01100 306 Gene3D - 3 291 - -
Bda06g01100 306 ProSitePatterns Heat shock hsp70 proteins family signature 3. 256 270 IPR018181 -
Bda06g01100 306 SUPERFAMILY Actin-like ATPase domain 7 107 IPR043129 -
Bda06g01100 306 Pfam Hsp70 protein 3 292 IPR013126 GO:0005524|GO:0140662
Bda06g01100 306 ProSitePatterns Heat shock hsp70 proteins family signature 2. 115 128 IPR018181 -
Bda06g01100 306 Gene3D Actin; Chain A, domain 4 148 235 - -
Bda06g01100 306 PRINTS 70kDa heat shock protein signature 121 131 - -
Bda06g01100 306 PRINTS 70kDa heat shock protein signature 253 269 - -
Bda06g01100 306 PRINTS 70kDa heat shock protein signature 62 82 - -
Bda06g01100 306 PRINTS 70kDa heat shock protein signature 284 304 - -
Bda06g01100 306 PANTHER HEAT SHOCK PROTEIN 70KDA 1 292 IPR013126 GO:0005524|GO:0140662
Bda06g01100 306 PANTHER 70 KDA HEAT SHOCK PROTEIN 1 292 - -
Bda06g01100 306 SUPERFAMILY Actin-like ATPase domain 110 292 IPR043129 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g01100 Bda-Chr6:39178313 Bda06g01138 Bda-Chr6:40340603 6.98E-115 dispersed
Bda06g01100 Bda-Chr6:39178313 Bda08g00728 Bda-Chr8:8219902 0 wgd
Bda06g01100 Bda-Chr6:39178313 Bda08g00700 Bda-Chr8:7552150 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g01100 K03283 - rcu:8263274 559.681