Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g01102 ATGGAGCTAACAAGGCGAGCGATGTCAATAATACTGGTTTCTTCAGCTCTTATATGGTTTATTCTGTTGTTTGATTTGGTCTCTGCCAACCCTGAAGGTGATGCCTTGAATGCATTGAAGACCAGTTTAGTGGATCCTAATAATGTCCTTCAAAGTTGGGATCCCACACTAGTCAATCCTTGCACATGGTTTCACGTAACATGCAGTCCTGATAATAGTGTCACGAGAGTGGATCTTGGAAATGCAAATCTGTCTGGCCAATTGGTTCCACAGCTTGGTCAACTATCAAATTTGCAGTACTTGGAACTTTATAGCAATAATATTAGTGGAGAAATTCCACAGCAGCTTGGGAACCTGGGAAACTTGGTGAGCTTGGATCTTTACCTGAACAACTTAACTGGTCCAATACCCAGCACACTGGGCAACCTTCAGAAGCTGCGTTTCTTGCGTCTCAACAACAACAGCTTGTCAGGAACTATTCCAGTATCCTTAACTAATGTTTCCACGCTTCAAGTCTTAGATCTTTCACATAACAAACTAACTGGAGATATTCCCGTCAATGGTTCCTTTTCTATATTCACCCCAATCAGTTTTGCAAATAATCTTCTGAATAATCCTCCACCTTCACCGCCACCTCCAGTTCCTCAATCACCATCACCTTCATCAGGGAATTCTGCCACTGGAGCAATTGCTGGAGGAGTTGCTGCCGCTGCTGCCTTGCTTTTTGCTGTCCCTGCAATTGCACTTGCTTTGTGGCGTCGACGAAGGCCACACGACCACTTCTTTGATGTACCTGCTGAGGAGGATCCAGAAGTTCATCTTGGCCAGCTCAAAAGGTTTTCTCTCCGGGAACTACAAGTCGCCACTGACTACTTCAGCAATAAACATGTTTTGGGAAGAGGTGGCTTTGGCAAGGTGTACAAAGGCCGTTTGGCCGATGGTACTCTGGTAGCAGTCAAAAGACTTAAAGAAGAGCGTACCCAGGGTGGAGAGCTGCAATTCCAAACTGAAGTAGAGATGATCAGCATGGCTGTGCATCGCAATCTGCTACGATTACGTGGTTTCTGCATGACACCAACCGAGCGGTTGCTTGTTTATCCTTACATGGCTAATGGGAGTGTAGCGTCATGTCTAAGAGAGCGCCCAGAAACACAGCAACCACTTAATTGGTCAATACGCAAACACATTGCTCTTGGCGCTGCTAGGGGTCTTTCTTACTTACATGATCATTGCGATCCGAAGATTATTCACCGAGATGTAAAAGCTGCAAATATTTTATTGGATGAAGAATTTGAAGCTGTTGTAGGGGATTTTGGGCTGGCTAAGCTCATGGACTATAAAGATACTCATGTCACAACTGCAGTGCGTGGTACTATTGGACACATAGCACCCGAATACCTTTCAACTGGAAAATCTTCAGAGAAGACAGATTGTTTCGGATATGGAGTGATGCTTCTTGAACTCATAACTGGACAGAGAGCTTTTGATCTTGCCCGCCTTGCAAATGATGATGATGTCATGTTACTTGATTGGGTGAAAGGGCTTCTGAAAGACAAGAAGCTGGAGACTCTTGTGGATCCCGACCTTGAAGGAAATTATGTGGAGGCAGAGGTGGAGGAGCTCATTCAAGTCGCACTACTTTGCACCCAAAACTCTCCCATAGAGCGTCCAAAAATGTCAGAGGTCGTGAGGATGCTCGAAGGTGATGGCTTGGCAGAAAGATGGGAAGAGTGGGAGAAAGAGGATCGGTTTGTCAACGACTTTAACCGGACTCAAATCCCCCACCCAGGTACGACTTGGATCTTTGACTCGACATCAAACATTCATCCCGATGAATTATCCGGCCCAAGGTGA 1854 45.47 MELTRRAMSIILVSSALIWFILLFDLVSANPEGDALNALKTSLVDPNNVLQSWDPTLVNPCTWFHVTCSPDNSVTRVDLGNANLSGQLVPQLGQLSNLQYLELYSNNISGEIPQQLGNLGNLVSLDLYLNNLTGPIPSTLGNLQKLRFLRLNNNSLSGTIPVSLTNVSTLQVLDLSHNKLTGDIPVNGSFSIFTPISFANNLLNNPPPSPPPPVPQSPSPSSGNSATGAIAGGVAAAAALLFAVPAIALALWRRRRPHDHFFDVPAEEDPEVHLGQLKRFSLRELQVATDYFSNKHVLGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPETQQPLNWSIRKHIALGAARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDCFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKDKKLETLVDPDLEGNYVEAEVEELIQVALLCTQNSPIERPKMSEVVRMLEGDGLAERWEEWEKEDRFVNDFNRTQIPHPGTTWIFDSTSNIHPDELSGPR 617
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 39196892 39204377 + Bda022883.1 Bda06g01102 8684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g01102 617 PANTHER BNAA08G11770D PROTEIN 14 617 IPR031048 GO:0004675|GO:0005102|GO:0006468
Bda06g01102 617 MobiDBLite consensus disorder prediction 204 219 - -
Bda06g01102 617 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524
Bda06g01102 617 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 14 617 - -
Bda06g01102 617 MobiDBLite consensus disorder prediction 203 226 - -
Bda06g01102 617 ProSiteProfiles Protein kinase domain profile. 292 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g01102 617 SMART serkin_6 292 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g01102 617 Gene3D Transferase(Phosphotransferase) domain 1 369 586 - -
Bda06g01102 617 Gene3D Ribonuclease Inhibitor 29 208 IPR032675 -
Bda06g01102 617 Gene3D Phosphorylase Kinase; domain 1 261 368 - -
Bda06g01102 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Bda06g01102 617 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Bda06g01102 617 SUPERFAMILY L domain-like 31 209 - -
Bda06g01102 617 Pfam Protein kinase domain 293 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g01102 617 SUPERFAMILY Protein kinase-like (PK-like) 271 567 IPR011009 -
Bda06g01102 617 ProSiteProfiles Leucine-rich repeat profile. 169 191 IPR001611 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g01102 Bda-Chr6:39196892 Bda13g00252 Bda-Chr13:3193202 0 dispersed
Bda11g00820 Bda-Chr11:8127080 Bda06g01102 Bda-Chr6:39196892 4.46E-92 dispersed
Bda11g00853 Bda-Chr11:8396251 Bda06g01102 Bda-Chr6:39196892 1.52E-94 dispersed
Bda15g00835 Bda-Chr15:12703938 Bda06g01102 Bda-Chr6:39196892 2.07E-67 dispersed
Bda06g01102 Bda-Chr6:39196892 Bda03g00411 Bda-Chr3:3543626 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69682 PF00069 Pkinase 9.00E-45 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g01102 K13416 - csv:101216389 976.081