Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g01104 ATGGCTGCGACATCTGGGTCTGTGCTTAATGGATTAAGCTCTCCTTTCTTGTGCGGAGGGAAGAGAAGCCAGGGCTTGCTGGCCGGACCAGCCAGAGTCGCCGTCAGTGCCTCTGTTCCTCGCAGGCAGCTGGTGGTGGTCGCCGCCAAGCAATCCTGGCTTCCTGGTGTTCGAGGTGGTGGCAACTTGGTCGACCCAGAATGGCTCGATGGCTCGCTACCAGGAGACTACGGTTTCGACCCTCTTGGATTAGGGAAGGACCCGGCATTTCTAAAATGGTACAGAGAGGCAGAGCTAATCCACGGACGATGGGCAATGGCCGCCGTCATCGGAATCTTGATCGGCCAAGCTTATAGCGGCATCCCCTGGTTCGAGGCCGGAGCTGCCCCCGGCGCAGTGTCGCCATTCTCCTTCGGCACCCTGCTCGGCACCCAACTCCTGCTAATGGGGTGGGTCGAGAGCAAGAGATGGGTAGATTTCTTCAACCAGGACTCGCAGTCGGTGGAGTGGGCGACGCCATGGTCGAGAACAGCCGAAAATTTCTCCAATGCCACCGGTGAGCAAGGGTACCCCGGCGGAAAATTCTTCGACCCGCTAAGCGTGGCCGGAACCATAAAAGATGGGGTTTACATTCCGGACGTGGAGAAGCTGGAGAGACTGAAGTTGGCGGAGATAAAGCATGCGAGAATCGCCATGTTAGCGATGCTTATTTTCTACTTTGAAGCTGGACAGGGGAAGACTCCCCTCGGTGCCATTGGAGTGTGA 765 57.25 MAATSGSVLNGLSSPFLCGGKRSQGLLAGPARVAVSASVPRRQLVVVAAKQSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVIGILIGQAYSGIPWFEAGAAPGAVSPFSFGTLLGTQLLLMGWVESKRWVDFFNQDSQSVEWATPWSRTAENFSNATGEQGYPGGKFFDPLSVAGTIKDGVYIPDVEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGAIGV 254
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 39216932 39218010 - Bda022885.1 Bda06g01104 8686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g01104 254 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 254 IPR001344 GO:0009765|GO:0016020
Bda06g01104 254 Pfam Chlorophyll A-B binding protein 66 242 IPR022796 -
Bda06g01104 254 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP24 10A, CHLOROPLASTIC 1 254 - -
Bda06g01104 254 Gene3D Chlorophyll a/b binding protein domain 66 252 - -
Bda06g01104 254 SUPERFAMILY Chlorophyll a-b binding protein 63 253 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g01104 Bda-Chr6:39216932 Bda08g00696 Bda-Chr8:7519531 1.46E-154 dispersed
Bda06g01104 Bda-Chr6:39216932 Bda08g00723 Bda-Chr8:8172572 1.46E-154 wgd
Bda06g01104 Bda-Chr6:39216932 Bda08g00695 Bda-Chr8:7505751 1.46E-154 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g01104 K08917 - vvi:100241887 444.506