Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda06g01107 | ATGGATCATTTATGTTGCTTCCATTCTTTATGTTCTCAGGTTGTGGGAGGAAAGTCGTCGAGCCAGTCCGGAAAGGGTAGGGGCCATCTAATACCTGTCAAGTATGGCTTCAGTCTAGCTAAAGGGAAAGCAGATCATCCAATGGAGGATTATCATGTTGCTAAGTTTATTCCATTTCATGGTCATGAGCTCGGCCTATTTGCTATATACGATGGACATCTGGGAGATACTGTGCCTGCCTATTTACAAAAGCATCTGTTTCATAATATTTTGAAGGATGAGGCGTTTTGGACTAATCCTGGGAGATCTATCTCGGAAGCCTATGAGATGACAGACCAAGCAATTCTTTCTCACTCTCCTGATCTAGGGAGAGGCGGGTCGACTGCAGTTACTGCTATTCTGATAAATGGTCGGAAGTTATGGGTAGCAAATGTTGGAGATTCACGAGCAGTTCTTTCGAGGAGAGGGCAGGCCGAGCAGATGTCGACTGATCATGAGCCAAATACCGATAGGGGTAGCATCGAGGATAGAGGTGGCTTTGTCTCAAATCTGCCAGGGGATGTTGCAAGAGTTAACGGACAGCTGGCTGTTTCTCGAGCCTTCGGTGACAAGAACCTCAAAATGCTCTTGCGATCCGATCCCGATGTAAAAGATGCGGATATCAATGAAGAGACCGATCTTCTTATTTTAGCCAGCGATGGCATATGGAAGGTGATGTCGAATCAAGAAGCCGTGGACATCGGGCAAAAGACGAAAGACCCGGAGAAGGCAGCCAAGCAACTGGTGTCAGAGGCGTTGAACCGCGAAAGCAAAGACGATATCTCAGTCGTCGTGGTTCGTTTTTCCAGCTAA | 852 | 46.95 | MDHLCCFHSLCSQVVGGKSSSQSGKGRGHLIPVKYGFSLAKGKADHPMEDYHVAKFIPFHGHELGLFAIYDGHLGDTVPAYLQKHLFHNILKDEAFWTNPGRSISEAYEMTDQAILSHSPDLGRGGSTAVTAILINGRKLWVANVGDSRAVLSRRGQAEQMSTDHEPNTDRGSIEDRGGFVSNLPGDVARVNGQLAVSRAFGDKNLKMLLRSDPDVKDADINEETDLLILASDGIWKVMSNQEAVDIGQKTKDPEKAAKQLVSEALNRESKDDISVVVVRFSS | 283 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 39257393 | 39259052 | + | Bda022889.1 | Bda06g01107 | 8689 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda06g01107 | 283 | Gene3D | - | 30 | 283 | IPR036457 | - | |
| Bda06g01107 | 283 | SMART | PP2C_4 | 26 | 279 | IPR001932 | - | |
| Bda06g01107 | 283 | SUPERFAMILY | PP2C-like | 30 | 282 | IPR036457 | - | |
| Bda06g01107 | 283 | MobiDBLite | consensus disorder prediction | 159 | 173 | - | - | |
| Bda06g01107 | 283 | ProSiteProfiles | PPM-type phosphatase domain profile. | 34 | 281 | IPR001932 | - | |
| Bda06g01107 | 283 | CDD | PP2Cc | 33 | 281 | IPR001932 | - | |
| Bda06g01107 | 283 | MobiDBLite | consensus disorder prediction | 153 | 176 | - | - | |
| Bda06g01107 | 283 | SMART | PP2C_SIG_2 | 45 | 281 | IPR001932 | - | |
| Bda06g01107 | 283 | PANTHER | PHOSPHATASE 2C FAMILY PROTEIN | 2 | 282 | - | - | |
| Bda06g01107 | 283 | Pfam | Protein phosphatase 2C | 42 | 274 | IPR001932 | - | |
| Bda06g01107 | 283 | PANTHER | PROTEIN PHOSPHATASE 2C | 2 | 282 | IPR015655 | GO:0004722|GO:0006470 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda06g01107 | Bda-Chr6:39257393 | Bda09g01017 | Bda-Chr9:40189384 | 8.59E-110 | dispersed | |
| Bda06g01107 | Bda-Chr6:39257393 | Bda08g00720 | Bda-Chr8:8097321 | 0 | wgd | |
| Bda06g01107 | Bda-Chr6:39257393 | Bda08g00693 | Bda-Chr8:7397070 | 2.61E-180 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda06g01107 | K17506 | - | pvy:116142160 | 464.922 |