Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g01107 ATGGATCATTTATGTTGCTTCCATTCTTTATGTTCTCAGGTTGTGGGAGGAAAGTCGTCGAGCCAGTCCGGAAAGGGTAGGGGCCATCTAATACCTGTCAAGTATGGCTTCAGTCTAGCTAAAGGGAAAGCAGATCATCCAATGGAGGATTATCATGTTGCTAAGTTTATTCCATTTCATGGTCATGAGCTCGGCCTATTTGCTATATACGATGGACATCTGGGAGATACTGTGCCTGCCTATTTACAAAAGCATCTGTTTCATAATATTTTGAAGGATGAGGCGTTTTGGACTAATCCTGGGAGATCTATCTCGGAAGCCTATGAGATGACAGACCAAGCAATTCTTTCTCACTCTCCTGATCTAGGGAGAGGCGGGTCGACTGCAGTTACTGCTATTCTGATAAATGGTCGGAAGTTATGGGTAGCAAATGTTGGAGATTCACGAGCAGTTCTTTCGAGGAGAGGGCAGGCCGAGCAGATGTCGACTGATCATGAGCCAAATACCGATAGGGGTAGCATCGAGGATAGAGGTGGCTTTGTCTCAAATCTGCCAGGGGATGTTGCAAGAGTTAACGGACAGCTGGCTGTTTCTCGAGCCTTCGGTGACAAGAACCTCAAAATGCTCTTGCGATCCGATCCCGATGTAAAAGATGCGGATATCAATGAAGAGACCGATCTTCTTATTTTAGCCAGCGATGGCATATGGAAGGTGATGTCGAATCAAGAAGCCGTGGACATCGGGCAAAAGACGAAAGACCCGGAGAAGGCAGCCAAGCAACTGGTGTCAGAGGCGTTGAACCGCGAAAGCAAAGACGATATCTCAGTCGTCGTGGTTCGTTTTTCCAGCTAA 852 46.95 MDHLCCFHSLCSQVVGGKSSSQSGKGRGHLIPVKYGFSLAKGKADHPMEDYHVAKFIPFHGHELGLFAIYDGHLGDTVPAYLQKHLFHNILKDEAFWTNPGRSISEAYEMTDQAILSHSPDLGRGGSTAVTAILINGRKLWVANVGDSRAVLSRRGQAEQMSTDHEPNTDRGSIEDRGGFVSNLPGDVARVNGQLAVSRAFGDKNLKMLLRSDPDVKDADINEETDLLILASDGIWKVMSNQEAVDIGQKTKDPEKAAKQLVSEALNRESKDDISVVVVRFSS 283
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 39257393 39259052 + Bda022889.1 Bda06g01107 8689
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda06g01107 283 Gene3D - 30 283 IPR036457 -
Bda06g01107 283 SMART PP2C_4 26 279 IPR001932 -
Bda06g01107 283 SUPERFAMILY PP2C-like 30 282 IPR036457 -
Bda06g01107 283 MobiDBLite consensus disorder prediction 159 173 - -
Bda06g01107 283 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Bda06g01107 283 CDD PP2Cc 33 281 IPR001932 -
Bda06g01107 283 MobiDBLite consensus disorder prediction 153 176 - -
Bda06g01107 283 SMART PP2C_SIG_2 45 281 IPR001932 -
Bda06g01107 283 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 2 282 - -
Bda06g01107 283 Pfam Protein phosphatase 2C 42 274 IPR001932 -
Bda06g01107 283 PANTHER PROTEIN PHOSPHATASE 2C 2 282 IPR015655 GO:0004722|GO:0006470
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g01107 Bda-Chr6:39257393 Bda09g01017 Bda-Chr9:40189384 8.59E-110 dispersed
Bda06g01107 Bda-Chr6:39257393 Bda08g00720 Bda-Chr8:8097321 0 wgd
Bda06g01107 Bda-Chr6:39257393 Bda08g00693 Bda-Chr8:7397070 2.61E-180 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g01107 K17506 - pvy:116142160 464.922