Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g01109 GCTATGGAGGCTGGGATTGTCAGAACTCAACTCAATGGCTCTCGCGTTTGGCGCACCAAGGGCCTCATTGGCGGCAAATGGACTGACGCCTATGATGGGAAGACCATTAAGGTCTACAATCCGGCGACGGGGGAAGTTGTAGCTGATGTCGCGTGTATGGGTACAAGGGAGGCGGAAGATGCTATCGCTTGCGCCGCTGAGGCTTTTAAGACTTGGGGAAGGATTACAGCACTTGAAAGGAGCAAACGTATGAAGAGATGGTTTGATTTACTGATTGCACACAAGGAAGAGCTTGGCCAACTCATAACCTTAGAGCAAGGAAAGCCTCTTAAAGACGCCATTGGTGAGGTCGTCTTCGGAGCCAGCTACATTGAGTTTTTTGCAGAAGAAGCTAAACGAGTCTATGGTGATATAATTCCATCTACTCTAGGCGATCGCCGTCTTTTGATCTTAAGACAGCCCGTTGGAGTTGTTGGTGCAATTACACCATGGAACTTTCCTTTTGCTATGATTGCACGAAAGGTTGGTCCTGCTCTTGCATGTGGCTGCACTATCGTCATAAAACCCTCTGAACTTACACCGCTCACGGCCTTAGCTGCTGCTGAGCTCTCCCTTCAGGCTGGAATCCCCCCAGGTGTTGTGAATGTGGTCATGGGAATTGCTCCTGAAATTGGGAAGGCTTTACTTGTCAGCAAAGAGGTAAGAAAGATAACTTTTACGGGCTCAACAGCAGTAGGGAAGATGTTGATGGCTGGTTGTGCCGATACTGTTAAAAAGGTATCTCTGGAGCTTGGTGGCAATGCACCTTGCATTGTGTTTGATGATGCAGACATTGAGGTTGCTATACAAGGAACACTTGCTGCAAAGTTCCGAAATACTGGACAAACTTGTGTCTGCGCCAACAGGATCTTTGTTCAAGAAGGCATATACGATAAATTTGCTGCTGCATTAACGAAAGAAATTCGGAATATGCGAGTAGGAGATGGCTTTGGTGAAGGAGTGGTTCTGGGTCCTCTCATTAATGAAGCTGCAATTCAGAAGGTTGAAACATTTATTCAAGATGCTGTCTCTAAGGGAGCAAAAGTTCTTCTCGGGGGCCGAAGACATAGGCTTGGAATGACCTTTTATGAGCCGACGGTTATTAAGGATGTGAAGAACGACATGCGGATAGCCAGAGAGGAAGTATTTGGTCCAGTCGCACCTTTATTGCGCTTTAAAACTGAAGAGGAAGTCATTGCCCTTGCCAACGATACCAATGCAGGTTGGTTGGCTGCTTACGTATTCACAACGAATGTCCAACGATCTTGGCGTATGACTGAATCTCTTGAATACGGCATTGTTGGTGTCAACGAAGGACTCATTTCTACAGAGGTAGCTCCATTTGGAGGCTTTAAACAGTCTGGACTTGGTCGGGAAGGTTCGAAATACGGCATGGATGACTTTCTGGAGGTA 1452 46.9 AMEAGIVRTQLNGSRVWRTKGLIGGKWTDAYDGKTIKVYNPATGEVVADVACMGTREAEDAIACAAEAFKTWGRITALERSKRMKRWFDLLIAHKEELGQLITLEQGKPLKDAIGEVVFGASYIEFFAEEAKRVYGDIIPSTLGDRRLLILRQPVGVVGAITPWNFPFAMIARKVGPALACGCTIVIKPSELTPLTALAAAELSLQAGIPPGVVNVVMGIAPEIGKALLVSKEVRKITFTGSTAVGKMLMAGCADTVKKVSLELGGNAPCIVFDDADIEVAIQGTLAAKFRNTGQTCVCANRIFVQEGIYDKFAAALTKEIRNMRVGDGFGEGVVLGPLINEAAIQKVETFIQDAVSKGAKVLLGGRRHRLGMTFYEPTVIKDVKNDMRIAREEVFGPVAPLLRFKTEEEVIALANDTNAGWLAAYVFTTNVQRSWRMTESLEYGIVGVNEGLISTEVAPFGGFKQSGLGREGSKYGMDDFLEV 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 39350407 39354762 + Bda033718 Bda06g01109 8691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g01109 484 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 262 269 IPR029510 GO:0016491
Bda06g01109 484 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 16 484 - -
Bda06g01109 484 CDD ALDH_F5_SSADH_GabD 38 484 - -
Bda06g01109 484 Pfam Aldehyde dehydrogenase family 27 484 IPR015590 GO:0016491
Bda06g01109 484 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 290 301 IPR016160 GO:0016491
Bda06g01109 484 SUPERFAMILY ALDH-like 13 483 IPR016161 GO:0016491
Bda06g01109 484 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 33 481 IPR016162 GO:0016491
Bda06g01109 484 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 16 484 - -
Bda06g01109 484 TIGRFAM SSADH: succinate-semialdehyde dehydrogenase 38 484 IPR010102 GO:0009013|GO:0009450
Bda06g01109 484 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 266 456 IPR016163 GO:0016620
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00225 Bda-Chr6:3830672 Bda06g01109 Bda-Chr6:39350407 0 dispersed
Bda06g01109 Bda-Chr6:39350407 Bda13g00727 Bda-Chr13:8750328 3.69E-145 dispersed
Bda06g01109 Bda-Chr6:39350407 Bda06g00234 Bda-Chr6:4124204 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g01109 K17761 - twl:119988855 751.51