Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g01119 ATGGGTTTGGCTTTTCCCTTTTATTTGCTCCTAATCTTGATTTATACTACTCCTGCCGCCGTTCTCTTCTCTCCGGCCGCGGTTTCCGTTTCCGCTTTGTCCTTTAATCTAACCAGCTTCGATTCCAGAGTCGGCAACATCACTTACGAGCGAGCTTACGCTGCAAGAGGAGCAATCCAGCTAACGGGGGAGATTGCCAACAGAGCAACCATCGGCCAGGCTACGTATTTCCAGGCTCTTCACCTCTGGGATAAAGCCTCCGGAAATCTCACAGATTTCTCGACTCATTTCGCCTTCGCCATCGATTCACAGAATAGTCCGTTATACGGCGACGGGCTAGCTTTTTTCTTTGCTCCCGAAAACACAAAGATCGATCCAAATATCACGAAGGGTGGAGGTTTGGGTCTAATCAACACCGACCAATCCCTTAACTCGACTGACCGGCCATTTTTTGCGGTGGAGTTTGATGTCTTTAGTAACGATTGGGATCCGCCTTATCACCATGTAGGTATTGACATCAATTCGATAGAATCTTTGGCTATTTCAAGCTGGCAGAGTACTGTTACTGTTATGGAAGGAAGAACAAGCGAAGCATGGATTGTTTATCGTTCTGATTCTCATAATTTGAGTGTTACTTTTACTGATCTTTCAGGAAATTCTACTGTTTTGACGAGTTTTTCTCATGTAATTGATCTAAGAACGTATTTGCCTGAGTATGTTACTATGGGATTTTCTGCTGCCACTGGAAATAATTCTGCACTTCACCGAATATATTCTTGGGATTTCTCTTCTTCCACCATTGTATTCCCCAATTTGACAGCTAATGTGACCCCCAACGGAACCACCACAGGAAATCCCGCAGGAACTCCCGGTGGTGGAACTGCCGGCAAGAAGGGGCTTGTTGCAGGTTTGAGTGTTGGTGGTGGGTTGGTTTTAGTGGCTTGTCTTGGTTTGATCTGGTTATGGATTCGGAAGAGAAAAAGAAGGGGCGAGGAAGAAGATGAGGGGTTTGATGAGTATATGAATCCAGAAATTGAAATGGGTAATGGACCGAAGAGATTTTCCTATTCAGAATTGGCTAGAGCGACCCATAATTTCAGTGTCTCTGAAAAGCTCGGACAAGGAGGATTTGGTGAAGTTTATAAAGGCTTTTTAGCAGACTTAAACACATATGTAGCCGTGAAGAGAGTGTCAAAGGGCTCTAGACAGGGCATTAAGGAGTATGCATCAGAAATACGGGTCATTAGCCGGTTGAGGCATCGGAATTTAGTGCAGCTAATCGGATGGTGCCACGAAAAGAAAGAACTTCTGCTGATCTATGAATTGATGTCAAATGCAAGCTTGGATGCCCATCTTTTCAAAGAAAACTCCTTGTTGACATGGGGAAGTAGATACAAAATAGCTCAAGGAATCGCCTCGGCTTTACTTTATCTCCACGAGGAGTGGGAGCAATGTGTAGTTCATCGAGATATAAAATCAAGCAACGTCATGTTGGATTCGAGCTTCAACGCAAAACTCGGAGATTTCGGGTTGGCTCGGCTGGTTGACCATGAAAAAGGGTCTCAAACCACGGTCCTAGCCGGCACATTCGGCTACATGGCCCCTGAATGTGCGACAACCGGTAGAGCAAGTAAAGAGTCTGATGTTTTCAGTTTTGGAATCGTAGCTTTAGAAATCGCTTGTGGGAGAAAACCCATCAACCCAAAAGCCAAACTAGATGAAATAGTGATGGTCGAGTGGGTGTGGAAGCTCTACGGCGATGGAAACATTCTAGAAGCTTCTGACCCAAAACTCTCCCGAGACTTCGATTCGAGGCAGATGGAATGCTTGATGGTTGTTGGACTGTGGTGTGCTCATCCAGACGTCAATTACAGGCCTGCAATCAGACAGGCAATTCAGGTTCTTAATTTTGAGGTTCCACTTCCTTCTCTTCCACCCAAAATGCCTGTGCCTACTTTTCTCTCTCCTCCTCCAAAACAAGTGTCCCCTTTTTCACTCACTGCAAATGACACTGAAGTTGAAAATGGCAAAGCCCAGTATCCCAATTATAGCTATTCTACCAATTCTTCAGAGGCTACTACCTCAAGCTCAGCTGCTGACCATTCTTCAACTGCTTCCCGTTTGCATACTCGCTAA 2136 45.22 MGLAFPFYLLLILIYTTPAAVLFSPAAVSVSALSFNLTSFDSRVGNITYERAYAARGAIQLTGEIANRATIGQATYFQALHLWDKASGNLTDFSTHFAFAIDSQNSPLYGDGLAFFFAPENTKIDPNITKGGGLGLINTDQSLNSTDRPFFAVEFDVFSNDWDPPYHHVGIDINSIESLAISSWQSTVTVMEGRTSEAWIVYRSDSHNLSVTFTDLSGNSTVLTSFSHVIDLRTYLPEYVTMGFSAATGNNSALHRIYSWDFSSSTIVFPNLTANVTPNGTTTGNPAGTPGGGTAGKKGLVAGLSVGGGLVLVACLGLIWLWIRKRKRRGEEEDEGFDEYMNPEIEMGNGPKRFSYSELARATHNFSVSEKLGQGGFGEVYKGFLADLNTYVAVKRVSKGSRQGIKEYASEIRVISRLRHRNLVQLIGWCHEKKELLLIYELMSNASLDAHLFKENSLLTWGSRYKIAQGIASALLYLHEEWEQCVVHRDIKSSNVMLDSSFNAKLGDFGLARLVDHEKGSQTTVLAGTFGYMAPECATTGRASKESDVFSFGIVALEIACGRKPINPKAKLDEIVMVEWVWKLYGDGNILEASDPKLSRDFDSRQMECLMVVGLWCAHPDVNYRPAIRQAIQVLNFEVPLPSLPPKMPVPTFLSPPPKQVSPFSLTANDTEVENGKAQYPNYSYSTNSSEATTSSSAADHSSTASRLHTR 711
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 39851201 39853336 + Bda022914.2 Bda06g01119 8701

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g01119 711 Pfam Legume lectin domain 33 266 IPR001220 GO:0030246
Bda06g01119 711 Gene3D Transferase(Phosphotransferase) domain 1 443 655 - -
Bda06g01119 711 PANTHER - 28 696 - -
Bda06g01119 711 Pfam Protein kinase domain 367 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g01119 711 Gene3D - 31 269 - -
Bda06g01119 711 ProSiteProfiles Protein kinase domain profile. 366 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g01119 711 MobiDBLite consensus disorder prediction 672 711 - -
Bda06g01119 711 Gene3D Phosphorylase Kinase; domain 1 351 442 - -
Bda06g01119 711 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 267 IPR013320 -
Bda06g01119 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 486 498 IPR008271 GO:0004672|GO:0006468
Bda06g01119 711 ProSitePatterns Protein kinases ATP-binding region signature. 372 395 IPR017441 GO:0005524
Bda06g01119 711 CDD STKc_IRAK 372 636 - -
Bda06g01119 711 SUPERFAMILY Protein kinase-like (PK-like) 350 657 IPR011009 -
Bda06g01119 711 SMART serkin_6 366 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g01119 711 PANTHER RECEPTOR LECTIN KINASE 28 696 - -
Bda06g01119 711 CDD lectin_legume_LecRK_Arcelin_ConA 33 265 IPR001220 GO:0030246
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g01119 - - - cit:102627018 753.436
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00181 Bda-Chr1:24129063 Bda06g01119 Bda-Chr6:39851201 5.26E-10 dispersed
Bda06g01119 Bda-Chr6:39851201 Bda06g01133 Bda-Chr6:40212318 0 dispersed
Bda06g01119 Bda-Chr6:39851201 Bda12g00968 Bda-Chr12:40858567 3.89E-131 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g910 . . Bda06g01119 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi03g00684 Csa07g00613 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Chy01g00192 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000150 2 7 3 2 2 5 6 4 4 9 8 5 7 10 9 7 6 7 5 4 9 4 4 5 5 9 3 2 3 2 158
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69683 PF00069 Pkinase 6.00E-50 CL0016 Bda PK