Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g01138 ATGGCCGCCGCTGCTTTACTTCGTTCTGTAAGACGTCGTGATTTAGCGTCCACCTCTCTCCTTGCTTATCGATCCGTAACTGGAAATGCAAAAACGTCGTTTAGTTCTCATCTTAGTCTAAAATGGTCTACCTTGGCCAGACCATTCAGTTCAAAGCCTGCGGGTAGTGATGTAGTCGGGATTGATTTGGGTACCACCAATTCTTGTGTTGCTGTGATGGAGGGAAAAAACCCAAAAGTTATTGAGAATTCAGAAGGGGCTCGTACCACACCATCAGTAGTTGCTTTTAACCAGAAAGGAGAATTACTCGTGGGAACTCCAGCAAAGCGACAAGCTGTGACCAATCCCACTAATACAATTTTTGGAACCAAACGTCTGATTGGGAGGCGCTTTGATGATGCTCAGACCCAAAAGGAAATGAAAATGGTGCCTTACAGGATAGTGAAAGCTCCCAATGGAGATGCTTGGGTCGAGGCAAATGGACAACAATATTCAGCAAGCCAAATTGGTGCTTTTATTCTTACTAAAATGAAAGAAACTGCCGAGGCTTACCTAGGAAAGTCAGTTGCAAAAGCTGTGGTTACTGTGCCTGCTTATTTTAACGATGCTCAGAGGCAAGCAACGAAGGATGCTGGCAGAATCGCTGGTCTTGATGTACTGAGAATCATCAATGAACCTACTGCTGCTGCACTTTCTTATGGAATGAACAATAAAGAGGGTCTCATAGCTGTTTTTGATCTTGGTGGTGGAACATTTGATGTTTCAATCTTGGAGATTTCTAATGGGGTTTTTGAGGTGAAAGCGACGAATGGGGATACATTCTTGGGAGGGGAAGATTTTGACAATGCCTTATTAGATTTCTTGGTGAGTGAGTTCAAGAGAACTGAATCAATTGATCTATCAAAAGACAGGCTGGCACTACAGAGGCTTAGGGAAGCCGCTGAAAAGGCAAAAATTGAGCTCTCATCAACATCACAAACCGAAATCAATTTACCATTCATCACAGCTGATGCATCTGGTGCAAAACATTTAAATATCACACTTACTAGATCAAAGTTTGAAAGCCTAGTTAATCAACTGATCGAAAGAACCAGGGCTCCTTGTAAGAACTGCTTGAAGGATGCCAACATATCTATTAAAGATGTGGATGAAGTACTTCTTGTTGGAGGTATGACTCGTGTCCCCAAGGTGCAAGAAGTAGTTTCTGAGATATTTGGAAAGAGCCCCAGTAAGGGAGTGAATCCCGATGAGGCCGTCGCCTTAGGAGCAGCAATTCAGGGTGGTATTCTGCGTGGTGATGTCAAAGAGCTGCTTCTTCTGGATGTTACCCCATTATCTCTTGGTATAGAAACACTTGGTGGTATTTTCACCAGGTTGATTAACAGGAATACTACGATTCCAACTAAGAAGAGCCAGGTGTTCTCAACTGCTGCCGACAATCAAACCCAAGTTGGTATTAAAGTACTGCAAGGAGAACGTGAAATGGCAACGGATAACAAGCTCTTGGGAGAATTCGAGCTTGTTGGTATTCCTCCCTCCCCAAGAGGAATTCCTCAGATTGAAGTCACATTTCGACATTGA 1581 43.39 MAAAALLRSVRRRDLASTSLLAYRSVTGNAKTSFSSHLSLKWSTLARPFSSKPAGSDVVGIDLGTTNSCVAVMEGKNPKVIENSEGARTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTIFGTKRLIGRRFDDAQTQKEMKMVPYRIVKAPNGDAWVEANGQQYSASQIGAFILTKMKETAEAYLGKSVAKAVVTVPAYFNDAQRQATKDAGRIAGLDVLRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVSEFKRTESIDLSKDRLALQRLREAAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFESLVNQLIERTRAPCKNCLKDANISIKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMATDNKLLGEFELVGIPPSPRGIPQIEVTFRH 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 40340603 40343537 + Bda022935.1 Bda06g01138 8720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g01138 526 PANTHER HEAT SHOCK 70 KDA PROTEIN, MITOCHONDRIAL 37 524 - -
Bda06g01138 526 ProSitePatterns Heat shock hsp70 proteins family signature 3. 385 399 IPR018181 -
Bda06g01138 526 Gene3D - 59 425 - -
Bda06g01138 526 Gene3D Actin; Chain A, domain 4 277 364 - -
Bda06g01138 526 SUPERFAMILY Actin-like ATPase domain 239 430 IPR043129 -
Bda06g01138 526 CDD HSPA9-like_NBD 55 430 - -
Bda06g01138 526 Coils Coil 300 327 - -
Bda06g01138 526 Pfam Hsp70 protein 58 525 IPR013126 GO:0005524|GO:0140662
Bda06g01138 526 Gene3D - 234 414 - -
Bda06g01138 526 PANTHER HEAT SHOCK PROTEIN 70KDA 37 524 IPR013126 GO:0005524|GO:0140662
Bda06g01138 526 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 426 526 IPR029047 -
Bda06g01138 526 ProSitePatterns Heat shock hsp70 proteins family signature 2. 244 257 IPR018181 -
Bda06g01138 526 ProSitePatterns Heat shock hsp70 proteins family signature 1. 61 68 IPR018181 -
Bda06g01138 526 PRINTS 70kDa heat shock protein signature 108 116 - -
Bda06g01138 526 PRINTS 70kDa heat shock protein signature 517 526 - -
Bda06g01138 526 PRINTS 70kDa heat shock protein signature 192 212 - -
Bda06g01138 526 PRINTS 70kDa heat shock protein signature 85 97 - -
Bda06g01138 526 PRINTS 70kDa heat shock protein signature 413 433 - -
Bda06g01138 526 PRINTS 70kDa heat shock protein signature 57 70 - -
Bda06g01138 526 PRINTS 70kDa heat shock protein signature 250 260 - -
Bda06g01138 526 PRINTS 70kDa heat shock protein signature 382 398 - -
Bda06g01138 526 PRINTS 70kDa heat shock protein signature 436 455 - -
Bda06g01138 526 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 432 525 IPR029047 -
Bda06g01138 526 SUPERFAMILY Actin-like ATPase domain 58 238 IPR043129 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g01100 Bda-Chr6:39178313 Bda06g01138 Bda-Chr6:40340603 6.98E-115 dispersed
Bda06g01138 Bda-Chr6:40340603 Bda08g00728 Bda-Chr8:8219902 0 dispersed
Bda13g00754 Bda-Chr13:9112089 Bda06g01138 Bda-Chr6:40340603 8.33E-98 dispersed
Bda06g01138 Bda-Chr6:40340603 Bda08g00700 Bda-Chr8:7552150 0 wgd
Bda06g01138 Bda-Chr6:40340603 Bda08g00658 Bda-Chr8:6863907 3.75E-178 wgd
Bda06g01138 Bda-Chr6:40340603 Bda09g01104 Bda-Chr9:41546982 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g01138 K04043 - csv:101216102 945.266