Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g01165 GCGCGGGGTTATCCTCCCCACCTATCGAAGCCCGGTCTCACAGCGACGGAGGACGACGCTGATCCGACCCGTTTAGCCTCCGTGGCGTTAGGGGCTTCCGTGGGCGGTGGACTCCGGAAGAAGGGAATTGGGGTTAGGTCATGGCTGCTTTTGGACTCTACCGGTGTTGCGCAGGTCGTTGAGGTGGGCAAGCACGCAATCATGCGCCGGACGGGTTTGCCTGCTCGCGATCTTCGGATTTTGGATCCTTTATTGTCGTATCCTTCAACCATTTTGGGCCGTGAGAGAGCGATTGTGATTAATCTGGAGCATATTAAAGCCATTATCACGGCTCATGAGGTGCTTCTGTTGAACTCTAGAGACCCCTCGGTGACGCCCTTTGTTGAAGAGCTACAGAGACGGATACTGCGTCATCACCAAGCCACCAAGGCACAAGAGGGCAAGGGCGCTGATTCAAATTGGACTGATATCTATGATTTGGGAGAGGCAAGATCAAGGGCTGTAAGTCCAGAAAATCCATATCAAGGATTTCCACAGTCTCAAGAAGGAAAAGAGGAAGGAAAGGAAGGTGGGAAACAAGGTCTTGATAACCACGATGGATTAAAGGTTCTCCCATTTGAGTTTGTTGCATTGGAAGCATGCCTTGAATCGACTTGCAGTAACTTAGAGAGTGAAGCTAAGACATTGGAGCAAGAGGCTCACCCAGCTTTGGATAAGCTGACTTCCAAGATCAGTACTCTCAATTTGGAACGTGTTCGTCAAATCAAAAGCCGATTGGTTGCAATAACTGGTCGAGTGCAAAAGATGAGGGATGAATTAGAACATTTGCTTGATGACGATGATGATATGGCAGAGATGTATTTGACAGAGAAGTTGGCTCAACAACAACTAGAAAACTCTTCCACATCCTCAATGGATGATGGAAATAACATGGACGATGAAGCTCTTCCCTCAGATATCGACTTCAGGCACTGTATCAGGTTACCTGCCGAAATAGATGGCGGTGGCATCCCGAGTAATTATGAAAGTGACATCCAGAACAATGAAGAACCTCAACACCCGCTTTTTGGTGGACCTAATGCACTTAGCCATGGAACCCATACGAGCACTACTCATAGTGCTTTAAGCAAACACCTTGATGTGGAGGAGCTTGAAATGCTTTTAGAGGCATACTTTGTTCAAATCGATGGTACTTCAAACAGACTATCTACGCTTCGAGAGTACGTGGACGACACAGAAGATTACATAAACATAATGTTGGATGACAAACAGAACCATCTTCTCCAAATGGGAGTTATGTTAACGACAGCAACTCTCGTTATCAGCGCCTTTGTTGTGTTGGCTGGAGTACTTGGCATGAACATACACATCGAGCTCTTTGACCTGGAAATAGGAAGTATGCATGAATTTCTTTGGACGGTCGGTGCAAGTGTCGCAGGAAGCGTTGTCCTCTATGTGATTGCCATTGCTTGGTACAAACACAAACGCTTGCTTGAG 1497 47.09 ARGYPPHLSKPGLTATEDDADPTRLASVALGASVGGGLRKKGIGVRSWLLLDSTGVAQVVEVGKHAIMRRTGLPARDLRILDPLLSYPSTILGRERAIVINLEHIKAIITAHEVLLLNSRDPSVTPFVEELQRRILRHHQATKAQEGKGADSNWTDIYDLGEARSRAVSPENPYQGFPQSQEGKEEGKEGGKQGLDNHDGLKVLPFEFVALEACLESTCSNLESEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKMRDELEHLLDDDDDMAEMYLTEKLAQQQLENSSTSSMDDGNNMDDEALPSDIDFRHCIRLPAEIDGGGIPSNYESDIQNNEEPQHPLFGGPNALSHGTHTSTTHSALSKHLDVEELEMLLEAYFVQIDGTSNRLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVISAFVVLAGVLGMNIHIELFDLEIGSMHEFLWTVGASVAGSVVLYVIAIAWYKHKRLLE 499
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 40987584 40992296 + Bda033726 Bda06g01165 8747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g01165 499 CDD Mrs2_Mfm1p-like 48 497 IPR039204 -
Bda06g01165 499 Gene3D - 39 119 - -
Bda06g01165 499 Gene3D Magnesium transport protein CorA, transmembrane region 179 427 - -
Bda06g01165 499 Coils Coil 212 232 - -
Bda06g01165 499 PANTHER MAGNESIUM TRANSPORTER MRS2-D-RELATED 31 499 - -
Bda06g01165 499 MobiDBLite consensus disorder prediction 182 196 - -
Bda06g01165 499 MobiDBLite consensus disorder prediction 336 374 - -
Bda06g01165 499 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 31 499 IPR039204 -
Bda06g01165 499 MobiDBLite consensus disorder prediction 165 196 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g01165 Bda-Chr6:40987584 Bda06g01174 Bda-Chr6:41159073 0 dispersed
Bda06g01157 Bda-Chr6:40677048 Bda06g01165 Bda-Chr6:40987584 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g01165 - - mnt:21394404 687.567